CuGenDBv2

Gene ID	IVF0024843
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Polyprotein
Genome location	chr04:11653119..11653622
RNA-Seq Expression	IVF0024843
Synteny	IVF0024843
Gene Ontology terms	GO:0006508 - proteolysis (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR028919 - Viral movement protein

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0037875.1 polyprotein [Cucumis melo var. makuwa]

4.69e-111

100

Show/hide

Query:  MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF
        MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF
Subjt:  MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF

Query:  TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE
        TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE
Subjt:  TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE

KAA0047922.1 polyprotein [Cucumis melo var. makuwa]

6.01e-98

91.02

Show/hide

Query:  MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF
        MLSKLLSKLS HS TIIDAT SSSYSSSS SNLR ++DLSTALA+HN+AEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQ VIVITEENVAMKDEF
Subjt:  MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF

Query:  TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE
        T IKLLPEETLFKV+++FKYLHIGCVQVALKPLFREGL+VPVYLALRDKRHLRFTPSLLGIVQSNLE
Subjt:  TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE

KAA0056776.1 Enzymatic polyprotein [Cucumis melo var. makuwa]

2.07e-97

98.8

Show/hide

Query:  MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF
        MLSKLLSKLSPHSP IIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF
Subjt:  MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF

Query:  TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE
        TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGL+VPVYLALRDKRHLRFTPSLLGIVQSNLE
Subjt:  TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE

KAA0059217.1 Enzymatic polyprotein [Cucumis melo var. makuwa]

1.40e-97

98.8

Show/hide

Query:  MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF
        MLSKLLSKLSPHSP IIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF
Subjt:  MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF

Query:  TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE
        TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGL+VPVYLALRDKRHLRFTPSLLGIVQSNLE
Subjt:  TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE

TYJ97599.1 Enzymatic polyprotein [Cucumis melo var. makuwa]

2.07e-97

98.8

Show/hide

Query:  MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF
        MLSKLLSKLSPHSP IIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF
Subjt:  MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF

Query:  TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE
        TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGL+VPVYLALRDKRHLRFTPSLLGIVQSNLE
Subjt:  TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T8S7 Polyprotein

2.1e-83

100

Show/hide

Query:  MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF
        MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF
Subjt:  MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF

Query:  TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE
        TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE
Subjt:  TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE

A0A5A7UR29 Enzymatic polyprotein

3.0e-82

98.8

Show/hide

Query:  MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF
        MLSKLLSKLSPHSP IIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF
Subjt:  MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF

Query:  TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE
        TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGL+VPVYLALRDKRHLRFTPSLLGIVQSNLE
Subjt:  TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE

A0A5A7UX67 Enzymatic polyprotein

3.0e-82

98.8

Show/hide

Query:  MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF
        MLSKLLSKLSPHSP IIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF
Subjt:  MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF

Query:  TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE
        TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGL+VPVYLALRDKRHLRFTPSLLGIVQSNLE
Subjt:  TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE

A0A5D3BEY3 Enzymatic polyprotein

3.0e-82

98.8

Show/hide

Query:  MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF
        MLSKLLSKLSPHSP IIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF
Subjt:  MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF

Query:  TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE
        TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGL+VPVYLALRDKRHLRFTPSLLGIVQSNLE
Subjt:  TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE

A0A5D3BG41 Enzymatic polyprotein

1.2e-75

92.81

Show/hide

Query:  MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF
        MLSKLLSKLSPHSPTIIDATASSSYSS S SN RS++DLSTALA+HN+AEAHLAQVENRLKNWSIPKLEA+QVYKINTFNFSQQD+IVITEENVAMKDEF
Subjt:  MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEF

Query:  TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE
        TAIKLLPEETL KVR+RFKYLHIGCVQVALKPLFREGL+VPVYLALRDKRHLRFTPSLLGIVQSNLE
Subjt:  TAIKLLPEETLFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE

SwissProt top hits

e value

%identity

Alignment

P05396 Movement protein

7.1e-04

40.74

Show/hide

Query:  KVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNL
        KVR     +H G ++V +K  FREG+N P+ +AL D R      S+LG    NL
Subjt:  KVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNL

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCTTTCTAAACTACTCTCTAAGCTCTCTCCTCACTCTCCCACAATCATCGACGCTACCGCTTCCTCTTCTTACTCTTCTTCATCGCCTTCGAATCTGAGATCCAAAAA
TGATCTTTCAACAGCTCTTGCCGAGCATAATTCAGCCGAAGCCCATCTGGCTCAGGTTGAAAACCGACTCAAAAATTGGTCTATTCCAAAACTAGAGGCCAATCAAGTGT
ACAAAATCAACACCTTCAATTTTTCTCAGCAAGACGTTATAGTCATCACTGAAGAAAACGTAGCAATGAAAGATGAGTTCACTGCTATCAAACTCTTACCTGAAGAGACT
CTCTTCAAAGTCAGAGACAGGTTCAAGTACCTTCACATAGGATGCGTTCAAGTTGCCTTGAAACCGCTCTTTAGAGAAGGGTTAAATGTTCCTGTCTACCTTGCTCTAAG
AGACAAGAGGCATCTCAGATTCACTCCCTCTCTCTTAGGGATTGTCCAATCAAACTTGGAATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MLSKLLSKLSPHSPTIIDATASSSYSSSSPSNLRSKNDLSTALAEHNSAEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQDVIVITEENVAMKDEFTAIKLLPEET
LFKVRDRFKYLHIGCVQVALKPLFREGLNVPVYLALRDKRHLRFTPSLLGIVQSNLE

IVF0024843 (gene) of Melon (IVF77) v1 genome