CuGenDBv2

Gene ID	IVF0024849
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Complex1_LYR domain-containing protein
Genome location	chr09:648513..651041
RNA-Seq Expression	IVF0024849
Synteny	IVF0024849
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004144434.1 uncharacterized protein LOC101204721 [Cucumis sativus]

7.92e-69

96.36

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Query:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASV
        MNSEALQVAK YRQLLKAVKKH+GKEESKKHFVDYVAQKFRDKSILSKPHS+QQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKR+LGKSAASV
Subjt:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASV

Query:  GLSLPEVYQP
        GLSLPEVYQP
Subjt:  GLSLPEVYQP

XP_022933120.1 uncharacterized protein LOC111439884 [Cucurbita moschata]

4.41e-66

93.64

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Query:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASV
        MNSEALQVAK YRQLLKAVKKHIGKEE+KKHFVDYVAQKFR+KS LSKPHSVQQ+IKLARDYTFLLNSVHHQKDLLFSYNIA+DRSDEMKRILGKSAASV
Subjt:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASV

Query:  GLSLPEVYQP
        GL LPEVYQP
Subjt:  GLSLPEVYQP

XP_022967927.1 uncharacterized protein LOC111467294 [Cucurbita maxima]

2.56e-65

92.73

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Query:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASV
        MNSEALQVAK YRQLLKAVK HIGKEE+KKHFVDYVAQKFR+KS LSKPHSVQQ+IKLARDYTFLLNSVHHQKDLLFSYNIA+DRSDEMKRILGKSAASV
Subjt:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASV

Query:  GLSLPEVYQP
        GL LPEVYQP
Subjt:  GLSLPEVYQP

XP_023544932.1 uncharacterized protein LOC111804382 [Cucurbita pepo subsp. pepo]

3.49e-63

90.91

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Query:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASV
        MNSEA QVAK YRQLLKAVK HIGKEE+KKHFVDYVAQKFR+ S +SKPHSVQQ+IKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASV
Subjt:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASV

Query:  GLSLPEVYQP
        GL LPEVYQP
Subjt:  GLSLPEVYQP

XP_038889144.1 uncharacterized protein LOC120079034 [Benincasa hispida]

7.33e-65

93.64

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Query:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASV
        MNSEALQVAK YRQLLKAVK HIGKEESKKHFVDYVAQKFRDK+ILSKPHSVQQEIKLA DYTFLLNSVHHQKDLLFSYNIAVDRS+EMKRILGKSAASV
Subjt:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASV

Query:  GLSLPEVYQP
        GL LPE YQP
Subjt:  GLSLPEVYQP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L9E2 Uncharacterized protein

3.1e-51

96.36

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Query:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASV
        MNSEALQVAK YRQLLKAVKKH+GKEESKKHFVDYVAQKFRDKSILSKPHS+QQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKR+LGKSAASV
Subjt:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASV

Query:  GLSLPEVYQP
        GLSLPEVYQP
Subjt:  GLSLPEVYQP

A0A5D3BQE5 Complex1_LYR domain-containing protein

2.2e-44

94.39

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Query:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASV
        MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNS     DLLFSYNIAVDRSDEMKRILGKSAASV
Subjt:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASV

Query:  GLSLPEV
        GLSLPE+
Subjt:  GLSLPEV

A0A6J1C0V5 uncharacterized protein LOC111006395

3.1e-43

83.64

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Query:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASV
        M+SEALQVA+ YR+LLKAVK HIGKEESKKHFVDYVAQKFR++S LS+PHS+QQ+IKLA DY  LLNSVHHQKDLLFSYNIA+DRS+EMKRILGKSAASV
Subjt:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASV

Query:  GLSLPEVYQP
        GL LPE YQP
Subjt:  GLSLPEVYQP

A0A6J1EY92 uncharacterized protein LOC111439884

3.8e-49

93.64

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Query:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASV
        MNSEALQVAK YRQLLKAVKKHIGKEE+KKHFVDYVAQKFR+KS LSKPHSVQQ+IKLARDYTFLLNSVHHQKDLLFSYNIA+DRSDEMKRILGKSAASV
Subjt:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASV

Query:  GLSLPEVYQP
        GL LPEVYQP
Subjt:  GLSLPEVYQP

A0A6J1HS51 uncharacterized protein LOC111467294

1.4e-48

92.73

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Query:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASV
        MNSEALQVAK YRQLLKAVK HIGKEE+KKHFVDYVAQKFR+KS LSKPHSVQQ+IKLARDYTFLLNSVHHQKDLLFSYNIA+DRSDEMKRILGKSAASV
Subjt:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASV

Query:  GLSLPEVYQP
        GL LPEVYQP
Subjt:  GLSLPEVYQP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G51960.1 CONTAINS InterPro DOMAIN/s: Complex 1 LYR protein (InterPro:IPR008011); Has 45 Blast hits to 45 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

3.5e-31

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Query:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASV
        M+ E +  A+ YR LLKAV KH+GKE+ K HF+D+V Q+FR        ++  ++I LAR+YT+LLNS+H  KDLLFSYNIAVDR++EMKR+L KSAASV
Subjt:  MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASV

Query:  GLSLPEVYQP
        GL LPEVY+P
Subjt:  GLSLPEVYQP

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAATTCAGAAGCCTTGCAGGTAGCTAAGGCCTATCGCCAGCTTCTCAAAGCTGTAAAGAAACATATTGGAAAGGAAGAGAGCAAGAAGCATTTTGTGGACTATGTGGC
TCAAAAGTTCAGGGATAAATCCATACTTTCAAAACCCCACTCTGTTCAACAGGAAATCAAGCTTGCTCGGGATTACACATTTCTACTTAACAGTGTGCACCATCAAAAGG
ACTTGCTGTTCTCGTACAACATTGCTGTTGATCGTTCAGATGAAATGAAGCGAATATTGGGGAAGTCTGCAGCAAGTGTGGGGCTTTCACTTCCTGAGGTTTATCAACCC
TGA

mRNA sequence

Show/hide mRNA sequence

GAACAAACCCTAACCACCAAAGCTATCTTTTTTCTGTTACTCATTTCTCTTTCCCTTAAACGACAATTATCCATTTTCCTACCCGACATCAATTTTGCTCTTCCTCCGGC
GGCGCGACACTCACCCACCTGCGTCGACGGGTCGAGCGACCTTCTGTGCTCTGCGTGATTTGAATCTGTTTGGATAGCATCAATGGTAAAGGTCTTTTAATTGGGAAAAG
AAAAAAGAAGAGAGGGTGGGGAGGTTCTTCGACCGGGTTGACAGCATCCGACGGAGTTTAGCCATCAGCATTCTTCCGAGCACATAGAAATTGTTGAGTTTTTGAGTGAC
AAGAAGAGGCCCTTGAAGACTTGGGGGTTTGAAAATGAATTCAGAAGCCTTGCAGGTAGCTAAGGCCTATCGCCAGCTTCTCAAAGCTGTAAAGAAACATATTGGAAAGG
AAGAGAGCAAGAAGCATTTTGTGGACTATGTGGCTCAAAAGTTCAGGGATAAATCCATACTTTCAAAACCCCACTCTGTTCAACAGGAAATCAAGCTTGCTCGGGATTAC
ACATTTCTACTTAACAGTGTGCACCATCAAAAGGACTTGCTGTTCTCGTACAACATTGCTGTTGATCGTTCAGATGAAATGAAGCGAATATTGGGGAAGTCTGCAGCAAG
TGTGGGGCTTTCACTTCCTGAGGTTTATCAACCCTGATGCCCTGTGGTTGTTTGATTAAGAAGAAGCATTTTTTTTCCCCTATCAAAGAAGAATAAGCACTTCGATGAGC
TGCCAACTTGCCAGCAGACTTACATATTGTTGATTTCTTCTACCTTTTGATGCATCAATTCTATGCGCATGGAAAGAAATGAAGGCTTACTGGACACTTTTATCAAATGG
TGAGATATTTCCTTTTATTAGTACTCCCGAGGGTGAATTGAAGCATTCTGGTGTGATGTTTGTTTCATTTCCAATTAATATAAACTTTAATAACGTGAAAAGGAGCTGCT
GAGTTTTGATGGAAAGCACTTTTACTTCACTTTATTACCATTGTCCAGAAATAAATGTTACATCTTGAAAGGCATTGAGTATCAGTATGGAGGTTTTTAAATATCCATGA
TGCTGTTTGGTTTATTGTTGATTTAATAATCATCATTGCAGATAGAATGCCGTGGTGAGTAATTGACTGAGTTACAATTTGCTAAAGGCTCTTTGATGTTGGTTTGTTTG
TAATGCTATATTTTTACTGTACTATGATGTATACAGATAG

Protein sequence

Show/hide protein sequence

MNSEALQVAKAYRQLLKAVKKHIGKEESKKHFVDYVAQKFRDKSILSKPHSVQQEIKLARDYTFLLNSVHHQKDLLFSYNIAVDRSDEMKRILGKSAASVGLSLPEVYQP

IVF0024849 (gene) of Melon (IVF77) v1 genome