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IVF0024878 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024878
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr03:8374679..8375104
RNA-Seq ExpressionIVF0024878
SyntenyIVF0024878
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR019557 - Aminotransferase-like, plant mobile domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]6.33e-7685.11Show/hide
Query:  MLFAELGIRDDLKDETHLATFLSCWLCVFVFPQKGSFLRPEVFRVASLMAASTIYSLAVPVLANIYHGLGLITKVSNSIGCMDFHFSMHFVHSWLAHYFG
        MLFAELGIRDDLKDET+LA FLSCWLC+FVFPQKGSFLRP VFRV SLMAA TIYSLAVPVLANIYHGLGLITK SN IG MDFHF MH+VH WLAHYFG
Subjt:  MLFAELGIRDDLKDETHLATFLSCWLCVFVFPQKGSFLRPEVFRVASLMAASTIYSLAVPVLANIYHGLGLITKVSNSIGCMDFHFSMHFVHSWLAHYFG

Query:  THYSLSTEVQGPKMTNFSSEGGFIYFGKYEARELIHNDVRI
        THY L TEV+GPKMTNFS EG  IYFG+YEARELIHN  RI
Subjt:  THYSLSTEVQGPKMTNFSSEGGFIYFGKYEARELIHNDVRI

KAA0047546.1 hypothetical protein E6C27_scaffold2963G00230 [Cucumis melo var. makuwa]1.79e-7585.11Show/hide
Query:  MLFAELGIRDDLKDETHLATFLSCWLCVFVFPQKGSFLRPEVFRVASLMAASTIYSLAVPVLANIYHGLGLITKVSNSIGCMDFHFSMHFVHSWLAHYFG
        MLFAELGI+DDLKDET+LA FLSCWLC+FVFPQKGSFLRP VFR ASLMAA TIYSLAVPVLANIYHGLGLITK SN IG MDFHF MH+VH WLAHYFG
Subjt:  MLFAELGIRDDLKDETHLATFLSCWLCVFVFPQKGSFLRPEVFRVASLMAASTIYSLAVPVLANIYHGLGLITKVSNSIGCMDFHFSMHFVHSWLAHYFG

Query:  THYSLSTEVQGPKMTNFSSEGGFIYFGKYEARELIHNDVRI
        THY L TEV+GPKMTNFS EGG IYFG+YEARELIHN  RI
Subjt:  THYSLSTEVQGPKMTNFSSEGGFIYFGKYEARELIHNDVRI

KAA0057575.1 hypothetical protein E6C27_scaffold497G00470 [Cucumis melo var. makuwa]5.23e-7885.11Show/hide
Query:  MLFAELGIRDDLKDETHLATFLSCWLCVFVFPQKGSFLRPEVFRVASLMAASTIYSLAVPVLANIYHGLGLITKVSNSIGCMDFHFSMHFVHSWLAHYFG
        MLFAELGIRDDLKDET+LA FLSCWLC+FVFP+KGSFLRPEVFRVASLM A TIYSLAVPVLANIYHGLGLITK SN IG MDFHF MH+VH WLAHYFG
Subjt:  MLFAELGIRDDLKDETHLATFLSCWLCVFVFPQKGSFLRPEVFRVASLMAASTIYSLAVPVLANIYHGLGLITKVSNSIGCMDFHFSMHFVHSWLAHYFG

Query:  THYSLSTEVQGPKMTNFSSEGGFIYFGKYEARELIHNDVRI
        THY L  EV+GPKMTNFS EGG IYFGKYEA ELIHN  RI
Subjt:  THYSLSTEVQGPKMTNFSSEGGFIYFGKYEARELIHNDVRI

TYK06278.1 hypothetical protein E5676_scaffold157G00620 [Cucumis melo var. makuwa]2.96e-7585.11Show/hide
Query:  MLFAELGIRDDLKDETHLATFLSCWLCVFVFPQKGSFLRPEVFRVASLMAASTIYSLAVPVLANIYHGLGLITKVSNSIGCMDFHFSMHFVHSWLAHYFG
        MLFAELGI+DDLKDET+LA FLSCWLC+FVFPQKGSFLRP VFR ASLMAA TIYSLAVPVLANIYHGLGLITK SN IG MDFHF MH+VH WLAHYFG
Subjt:  MLFAELGIRDDLKDETHLATFLSCWLCVFVFPQKGSFLRPEVFRVASLMAASTIYSLAVPVLANIYHGLGLITKVSNSIGCMDFHFSMHFVHSWLAHYFG

Query:  THYSLSTEVQGPKMTNFSSEGGFIYFGKYEARELIHNDVRI
        THY L TEV+GPKMTNFS EGG IYFG+YEARELIHN  RI
Subjt:  THYSLSTEVQGPKMTNFSSEGGFIYFGKYEARELIHNDVRI

TYK20969.1 hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa]1.20e-7885.82Show/hide
Query:  MLFAELGIRDDLKDETHLATFLSCWLCVFVFPQKGSFLRPEVFRVASLMAASTIYSLAVPVLANIYHGLGLITKVSNSIGCMDFHFSMHFVHSWLAHYFG
        MLFAELGIRDDLKDET+LA FLSCWLC+FVFPQKGSFLRP VFRVASLMAA TIYSLAVPVLANIYHGLGLITK SN IG MDFHF MH+VH WLA+YFG
Subjt:  MLFAELGIRDDLKDETHLATFLSCWLCVFVFPQKGSFLRPEVFRVASLMAASTIYSLAVPVLANIYHGLGLITKVSNSIGCMDFHFSMHFVHSWLAHYFG

Query:  THYSLSTEVQGPKMTNFSSEGGFIYFGKYEARELIHNDVRI
        THY L TEV+ PKMTNFS EGG IYFGKYEARELIHN  RI
Subjt:  THYSLSTEVQGPKMTNFSSEGGFIYFGKYEARELIHNDVRI

TrEMBL top hitse value%identityAlignment
A0A5A7SHN8 PMD domain-containing protein2.0e-6384.4Show/hide
Query:  MLFAELGIRDDLKDETHLATFLSCWLCVFVFPQKGSFLRPEVFRVASLMAASTIYSLAVPVLANIYHGLGLITKVSNSIGCMDFHFSMHFVHSWLAHYFG
        MLFAELGI+DDLKDET+LA FLSCWLC+F+FPQKGSFLRP VFR ASLMAA TIYSLAVPVLANIYHGLGLITK SN IG MDFHF MH+VH WLAHYFG
Subjt:  MLFAELGIRDDLKDETHLATFLSCWLCVFVFPQKGSFLRPEVFRVASLMAASTIYSLAVPVLANIYHGLGLITKVSNSIGCMDFHFSMHFVHSWLAHYFG

Query:  THYSLSTEVQGPKMTNFSSEGGFIYFGKYEARELIHNDVRI
        THY L TEV+GPKMTNFS EGG IYFG+YEARELIHN  RI
Subjt:  THYSLSTEVQGPKMTNFSSEGGFIYFGKYEARELIHNDVRI

A0A5A7TZZ9 PMD domain-containing protein2.0e-6385.11Show/hide
Query:  MLFAELGIRDDLKDETHLATFLSCWLCVFVFPQKGSFLRPEVFRVASLMAASTIYSLAVPVLANIYHGLGLITKVSNSIGCMDFHFSMHFVHSWLAHYFG
        MLFAELGI+DDLKDET+LA FLSCWLC+FVFPQKGSFLRP VFR ASLMAA TIYSLAVPVLANIYHGLGLITK SN IG MDFHF MH+VH WLAHYFG
Subjt:  MLFAELGIRDDLKDETHLATFLSCWLCVFVFPQKGSFLRPEVFRVASLMAASTIYSLAVPVLANIYHGLGLITKVSNSIGCMDFHFSMHFVHSWLAHYFG

Query:  THYSLSTEVQGPKMTNFSSEGGFIYFGKYEARELIHNDVRI
        THY L TEV+GPKMTNFS EGG IYFG+YEARELIHN  RI
Subjt:  THYSLSTEVQGPKMTNFSSEGGFIYFGKYEARELIHNDVRI

A0A5A7UVI5 PMD domain-containing protein1.6e-6385.11Show/hide
Query:  MLFAELGIRDDLKDETHLATFLSCWLCVFVFPQKGSFLRPEVFRVASLMAASTIYSLAVPVLANIYHGLGLITKVSNSIGCMDFHFSMHFVHSWLAHYFG
        MLFAELGIRDDLKDET+LA FLSCWLC+FVFP+KGSFLRPEVFRVASLM A TIYSLAVPVLANIYHGLGLITK SN IG MDFHF MH+VH WLAHYFG
Subjt:  MLFAELGIRDDLKDETHLATFLSCWLCVFVFPQKGSFLRPEVFRVASLMAASTIYSLAVPVLANIYHGLGLITKVSNSIGCMDFHFSMHFVHSWLAHYFG

Query:  THYSLSTEVQGPKMTNFSSEGGFIYFGKYEARELIHNDVRI
        THY L  EV+GPKMTNFS EGG IYFGKYEA ELIHN  RI
Subjt:  THYSLSTEVQGPKMTNFSSEGGFIYFGKYEARELIHNDVRI

A0A5D3C543 PMD domain-containing protein2.0e-6385.11Show/hide
Query:  MLFAELGIRDDLKDETHLATFLSCWLCVFVFPQKGSFLRPEVFRVASLMAASTIYSLAVPVLANIYHGLGLITKVSNSIGCMDFHFSMHFVHSWLAHYFG
        MLFAELGI+DDLKDET+LA FLSCWLC+FVFPQKGSFLRP VFR ASLMAA TIYSLAVPVLANIYHGLGLITK SN IG MDFHF MH+VH WLAHYFG
Subjt:  MLFAELGIRDDLKDETHLATFLSCWLCVFVFPQKGSFLRPEVFRVASLMAASTIYSLAVPVLANIYHGLGLITKVSNSIGCMDFHFSMHFVHSWLAHYFG

Query:  THYSLSTEVQGPKMTNFSSEGGFIYFGKYEARELIHNDVRI
        THY L TEV+GPKMTNFS EGG IYFG+YEARELIHN  RI
Subjt:  THYSLSTEVQGPKMTNFSSEGGFIYFGKYEARELIHNDVRI

A0A5D3DCE5 PMD domain-containing protein2.7e-6385.82Show/hide
Query:  MLFAELGIRDDLKDETHLATFLSCWLCVFVFPQKGSFLRPEVFRVASLMAASTIYSLAVPVLANIYHGLGLITKVSNSIGCMDFHFSMHFVHSWLAHYFG
        MLFAELGIRDDLKDET+LA FLSCWLC+FVFPQKGSFLRP VFRVASLMAA TIYSLAVPVLANIYHGLGLITK SN IG MDFHF MH+VH WLA+YFG
Subjt:  MLFAELGIRDDLKDETHLATFLSCWLCVFVFPQKGSFLRPEVFRVASLMAASTIYSLAVPVLANIYHGLGLITKVSNSIGCMDFHFSMHFVHSWLAHYFG

Query:  THYSLSTEVQGPKMTNFSSEGGFIYFGKYEARELIHNDVRI
        THY L TEV+ PKMTNFS EGG IYFGKYEARELIHN  RI
Subjt:  THYSLSTEVQGPKMTNFSSEGGFIYFGKYEARELIHNDVRI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATTTGCGGAACTTGGAATCAGGGATGATCTGAAGGATGAAACGCATTTAGCTACCTTCTTATCTTGTTGGTTGTGCGTTTTCGTATTTCCCCAGAAAGGATCATT
TCTTCGCCCCGAAGTATTTAGGGTTGCAAGCTTAATGGCCGCTAGCACTATTTATAGTCTTGCAGTTCCAGTTTTGGCGAACATATATCATGGGCTAGGTTTGATAACCA
AAGTCTCTAATTCGATAGGATGCATGGACTTTCATTTTTCCATGCATTTCGTCCATAGCTGGTTAGCCCATTATTTTGGCACACATTATTCACTTTCCACTGAAGTTCAA
GGCCCCAAGATGACTAACTTTTCAAGCGAAGGCGGGTTTATTTATTTTGGTAAATATGAGGCGCGAGAATTGATCCATAATGATGTAAGAATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTATTTGCGGAACTTGGAATCAGGGATGATCTGAAGGATGAAACGCATTTAGCTACCTTCTTATCTTGTTGGTTGTGCGTTTTCGTATTTCCCCAGAAAGGATCATT
TCTTCGCCCCGAAGTATTTAGGGTTGCAAGCTTAATGGCCGCTAGCACTATTTATAGTCTTGCAGTTCCAGTTTTGGCGAACATATATCATGGGCTAGGTTTGATAACCA
AAGTCTCTAATTCGATAGGATGCATGGACTTTCATTTTTCCATGCATTTCGTCCATAGCTGGTTAGCCCATTATTTTGGCACACATTATTCACTTTCCACTGAAGTTCAA
GGCCCCAAGATGACTAACTTTTCAAGCGAAGGCGGGTTTATTTATTTTGGTAAATATGAGGCGCGAGAATTGATCCATAATGATGTAAGAATTTAG
Protein sequenceShow/hide protein sequence
MLFAELGIRDDLKDETHLATFLSCWLCVFVFPQKGSFLRPEVFRVASLMAASTIYSLAVPVLANIYHGLGLITKVSNSIGCMDFHFSMHFVHSWLAHYFGTHYSLSTEVQ
GPKMTNFSSEGGFIYFGKYEARELIHNDVRI