CuGenDBv2

Gene ID	IVF0024882
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Atp synthase subunit alpha
Genome location	chr12:4430545..4430781
RNA-Seq Expression	IVF0024882
Synteny	IVF0024882
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005739 - mitochondrion (cellular component) GO:0009507 - chloroplast (cellular component) GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component) GO:0005524 - ATP binding (molecular function) GO:0043531 - ADP binding (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domains	IPR004100 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain IPR023366 - ATP synthase subunit alpha, N-terminal domain-like superfamily IPR036121 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0059487.1 atp synthase subunit alpha [Cucumis melo var. makuwa]

4.40e-49

100

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Query:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPARLCLGVWSAPWEHLLMEEGLSAIMSEDVSK
        MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPARLCLGVWSAPWEHLLMEEGLSAIMSEDVSK
Subjt:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPARLCLGVWSAPWEHLLMEEGLSAIMSEDVSK

KAA0063172.1 ATP synthase subunit 1 [Cucumis melo var. makuwa]

1.13e-23

79.66

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Query:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPA-RLCLGVWSAP
        MVEF + VKGIALNLENENV IVVFGSD AIKEGDLVKHTGSI+D+P  RLC G+WS P
Subjt:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPA-RLCLGVWSAP

KAE8648350.1 hypothetical protein Csa_023147 [Cucumis sativus]

7.58e-27

76.47

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Query:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDI-PARLCLGVWSAPWEHLLMEEG
        +VEF +GVKGIALNLENENV I++FGSD AIKEGDLVK T SIVD+   RLCLGVWS PW++LLMEEG
Subjt:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDI-PARLCLGVWSAPWEHLLMEEG

KAF7138639.1 hypothetical protein RHSIM_Rhsim07G0202400 [Rhododendron simsii]

2.59e-20

72.46

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Query:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPA-RLCLGVWSAPWEHLLMEEGL
        MVEF S VKGIALNLENENV IV FGSD  IKEGDLVK TGSIVD+PA +  LG      E LLMEEGL
Subjt:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPA-RLCLGVWSAPWEHLLMEEGL

KAG0450464.1 hypothetical protein HPP92_026907 [Vanilla planifolia]

1.57e-20

61.45

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Query:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPARLCL-----GVWSAPWEHLLMEEGLSAIMSEDVSK
        MVEF SGVKGIALNLENENV I+VFGSD  I+E DLVKHTGSIVD+PAR  +      V+  P + +    G S IM+EDV K
Subjt:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPARLCL-----GVWSAPWEHLLMEEGLSAIMSEDVSK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KT56 ATP-synt_ab_N domain-containing protein

5.3e-21

79.41

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Query:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDI-PARLCLGVWSAPWEHLLMEEG
        MVEF SGVKGIALNLENENV I++FGSD AIKEGDLVK T SIVD+   RLCLGVWS PW++LLMEEG
Subjt:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDI-PARLCLGVWSAPWEHLLMEEG

A0A5A7UCL8 ATPase subunit 1 (Mitochondrion)

2.0e-15

89.8

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Query:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPAR
        MVEFV+GVKGIALNLENE+VWIVVFGSD AIKEGDLVK TGSI+DIPAR
Subjt:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPAR

A0A5A7V4K1 ATP synthase subunit 1 (Mitochondrion)

7.9e-17

79.66

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Query:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIP-ARLCLGVWSAP
        MVEF + VKGIALNLENENV IVVFGSD AIKEGDLVKHTGSI+D+P  RLC G+WS P
Subjt:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIP-ARLCLGVWSAP

A0A5D3DCM8 Atp synthase subunit alpha

2.0e-36

100

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Query:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPARLCLGVWSAPWEHLLMEEGLSAIMSEDVSK
        MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPARLCLGVWSAPWEHLLMEEGLSAIMSEDVSK
Subjt:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPARLCLGVWSAPWEHLLMEEGLSAIMSEDVSK

A0A803MZD4 Uncharacterized protein

3.3e-15

91.84

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Query:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPAR
        MVEF SGVKGIALNLENENV IVVFGSDIAIKEGDLVK TGSIVD+PAR
Subjt:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPAR

SwissProt top hits

e value

%identity

Alignment

P05492 ATP synthase subunit alpha, mitochondrial

1.7e-16

89.58

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Query:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPA
        MVEF SGVKGIALNLENENV IVVFGSD AIKEGDLVK TGSIVD+PA
Subjt:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPA

P05494 ATP synthase subunit alpha, mitochondrial

1.7e-16

89.58

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Query:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPA
        MVEF SGVKGIALNLENENV IVVFGSD AIKEGDLVK TGSIVD+PA
Subjt:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPA

P05495 ATP synthase subunit alpha, mitochondrial

1.7e-16

89.58

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Query:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPA
        MVEF SGVKGIALNLENENV IVVFGSD AIKEGDLVK TGSIVD+PA
Subjt:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPA

P18260 ATP synthase subunit alpha, mitochondrial

1.7e-16

89.58

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Query:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPA
        MVEF SGVKGIALNLENENV IVVFGSD AIKEGDLVK TGSIVD+PA
Subjt:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPA

Q06735 ATP synthase subunit alpha, mitochondrial

1.7e-16

89.58

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Query:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPA
        MVEF SGVKGIALNLENENV IVVFGSD AIKEGDLVK TGSIVD+PA
Subjt:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPA

Arabidopsis top hits

e value

%identity

Alignment

AT2G07698.1 ATPase, F1 complex, alpha subunit protein

1.5e-15

81.25

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Query:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPA
        MV F +GVKG+ALNLENENV IVVFG D AIKEGDLVK TGSIVD+PA
Subjt:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPA

ATCG00120.1 ATP synthase subunit alpha

2.5e-07

53.19

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Query:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIP
        +VEF  G  GIALNLE+ NV +V+ G  + I+EG  VK TG I  IP
Subjt:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIP

ATMG01190.1 ATP synthase subunit 1

1.5e-15

81.25

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Query:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPA
        MV F +GVKG+ALNLENENV IVVFG D AIKEGDLVK TGSIVD+PA
Subjt:  MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPA

Sequences

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CDS sequence

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ATGGTAGAATTTGTCAGTGGTGTCAAAGGAATAGCCTTAAATCTTGAGAATGAGAATGTATGGATTGTTGTCTTTGGTAGTGATATCGCTATTAAAGAAGGAGATCTTGT
CAAGCACACTGGATCGATTGTGGATATTCCAGCAAGGTTATGCTTGGGTGTATGGTCGGCACCTTGGGAGCACCTATTGATGGAAGAGGGGCTTTCAGCGATCATGAGCG
AAGACGTATCAAAGTGA

mRNA sequence

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Protein sequence

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MVEFVSGVKGIALNLENENVWIVVFGSDIAIKEGDLVKHTGSIVDIPARLCLGVWSAPWEHLLMEEGLSAIMSEDVSK

IVF0024882 (gene) of Melon (IVF77) v1 genome