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IVF0024920 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024920
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr07:16770329..16770496
RNA-Seq ExpressionIVF0024920
SyntenyIVF0024920
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032832.1 retrotransposon protein [Cucumis melo var. makuwa]9.33e-2383.64Show/hide
Query:  MTYYGNVDDVDEEDSTYATTTASEEIHYIETTNEWSQWSDELAESMFTDWQLRNA
        MTY  ++DDVDE DSTYATTTASE+IHYIE TNEWSQW DELAESMFTD QLRNA
Subjt:  MTYYGNVDDVDEEDSTYATTTASEEIHYIETTNEWSQWSDELAESMFTDWQLRNA

KAA0054051.1 retrotransposon protein [Cucumis melo var. makuwa]9.66e-2585.45Show/hide
Query:  MTYYGNVDDVDEEDSTYATTTASEEIHYIETTNEWSQWSDELAESMFTDWQLRNA
        MTY  ++DDVDE DS YATTTASE+IHYIETTNEWSQW DELAESMFTDWQLRNA
Subjt:  MTYYGNVDDVDEEDSTYATTTASEEIHYIETTNEWSQWSDELAESMFTDWQLRNA

TYK07212.1 retrotransposon protein [Cucumis melo var. makuwa]6.40e-2385.45Show/hide
Query:  MTYYGNVDDVDEEDSTYATTTASEEIHYIETTNEWSQWSDELAESMFTDWQLRNA
        MTY  NVDD+DE DSTY TTTASE+IHYIETTNEWSQW DEL ESMFTDWQLRNA
Subjt:  MTYYGNVDDVDEEDSTYATTTASEEIHYIETTNEWSQWSDELAESMFTDWQLRNA

TYK22655.1 retrotransposon protein [Cucumis melo var. makuwa]6.56e-2383.64Show/hide
Query:  MTYYGNVDDVDEEDSTYATTTASEEIHYIETTNEWSQWSDELAESMFTDWQLRNA
        MTY  +VDD DEEDS YATTTASE+I YIETTNEWSQW DEL ESMFTDWQLRNA
Subjt:  MTYYGNVDDVDEEDSTYATTTASEEIHYIETTNEWSQWSDELAESMFTDWQLRNA

TYK30996.1 retrotransposon protein [Cucumis melo var. makuwa]2.05e-2387.27Show/hide
Query:  MTYYGNVDDVDEEDSTYATTTASEEIHYIETTNEWSQWSDELAESMFTDWQLRNA
        MTY  NVDDVDE DSTYATTTASE+I YIETTNEWSQW DELA+SMFTDWQLRNA
Subjt:  MTYYGNVDDVDEEDSTYATTTASEEIHYIETTNEWSQWSDELAESMFTDWQLRNA

TrEMBL top hitse value%identityAlignment
A0A5A7URP2 Retrotransposon protein5.1e-1885.45Show/hide
Query:  MTYYGNVDDVDEEDSTYATTTASEEIHYIETTNEWSQWSDELAESMFTDWQLRNA
        MTY  NVDD+DE DSTY TTTASE+IHYIETTNEWSQW DEL ESMFTDWQLRNA
Subjt:  MTYYGNVDDVDEEDSTYATTTASEEIHYIETTNEWSQWSDELAESMFTDWQLRNA

A0A5A7V4J1 Retrotransposon protein5.1e-1887.27Show/hide
Query:  MTYYGNVDDVDEEDSTYATTTASEEIHYIETTNEWSQWSDELAESMFTDWQLRNA
        MTY  +VDDVDE DSTYATTT SE+IHYIETTNEWSQW DELAESMFTDWQLRNA
Subjt:  MTYYGNVDDVDEEDSTYATTTASEEIHYIETTNEWSQWSDELAESMFTDWQLRNA

A0A5D3BDZ0 Retrotransposon protein5.1e-1885.45Show/hide
Query:  MTYYGNVDDVDEEDSTYATTTASEEIHYIETTNEWSQWSDELAESMFTDWQLRNA
        MTY  ++DDVDE DS YATTTASE+IHYIETTNEWSQW DELAESMFTDWQLRNA
Subjt:  MTYYGNVDDVDEEDSTYATTTASEEIHYIETTNEWSQWSDELAESMFTDWQLRNA

A0A5D3C7D1 Retrotransposon protein5.1e-1885.45Show/hide
Query:  MTYYGNVDDVDEEDSTYATTTASEEIHYIETTNEWSQWSDELAESMFTDWQLRNA
        MTY  NVDD+DE DSTY TTTASE+IHYIETTNEWSQW DEL ESMFTDWQLRNA
Subjt:  MTYYGNVDDVDEEDSTYATTTASEEIHYIETTNEWSQWSDELAESMFTDWQLRNA

A0A5D3E5R9 Retrotransposon protein5.1e-1887.27Show/hide
Query:  MTYYGNVDDVDEEDSTYATTTASEEIHYIETTNEWSQWSDELAESMFTDWQLRNA
        MTY  NVDDVDE DSTYATTTASE+I YIETTNEWSQW DELA+SMFTDWQLRNA
Subjt:  MTYYGNVDDVDEEDSTYATTTASEEIHYIETTNEWSQWSDELAESMFTDWQLRNA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTACGGCAACGTTGACGACGTGGACGAGGAAGACTCCACCTACGCGACGACCACCGCTTCAGAAGAAATTCACTACATTGAGACGACAAACGAGTGGTCTCA
GTGGAGCGACGAACTAGCCGAATCGATGTTCACTGATTGGCAGTTGCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTACGGCAACGTTGACGACGTGGACGAGGAAGACTCCACCTACGCGACGACCACCGCTTCAGAAGAAATTCACTACATTGAGACGACAAACGAGTGGTCTCA
GTGGAGCGACGAACTAGCCGAATCGATGTTCACTGATTGGCAGTTGCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYYGNVDDVDEEDSTYATTTASEEIHYIETTNEWSQWSDELAESMFTDWQLRNA