CuGenDBv2

Gene ID	IVF0024948
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	DNA-directed RNA polymerase III subunit RPC3
Genome location	chr06:12061..19346
RNA-Seq Expression	IVF0024948
Synteny	IVF0024948
Gene Ontology terms	GO:0006351 - transcription, DNA-templated (biological process) GO:0005666 - RNA polymerase III complex (cellular component) GO:0003697 - single-stranded DNA binding (molecular function) GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domains	IPR008806 - RNA polymerase III Rpc82, C -terminal IPR013197 - RNA polymerase III subunit RPC82-related, helix-turn-helix IPR036388 - Winged helix-like DNA-binding domain superfamily IPR039748 - DNA-directed RNA polymerase III subunit RPC3

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0033658.1 DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Cucumis melo var. makuwa]

2.91e-310

91.65

Show/hide

Query:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
        MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS

Query:  KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFRPKLKNNLLLEK------EIFEVP
        KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPA      PK++      K      +IFEVP
Subjt:  KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFRPKLKNNLLLEK------EIFEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA
        ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  VKS-------------VLLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEL
        +                 LWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKE+
Subjt:  VKS-------------VLLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEL

TYK22958.1 DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Cucumis melo var. makuwa]

1.02e-310

91.65

Show/hide

Query:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
        MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS

Query:  KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFRPKLKNNLLLEK------EIFEVP
        KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPA      PK++      K      +IFEVP
Subjt:  KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFRPKLKNNLLLEK------EIFEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA
        ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  VKS-------------VLLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEL
        +                 LWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKE+
Subjt:  VKS-------------VLLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEL

XP_008439232.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Cucumis melo]

0.0

92.53

Show/hide

Query:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
        MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS

Query:  KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFRPKLKNNLLLEK------EIFEVP
        KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPA      PK++      K      +IFEVP
Subjt:  KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFRPKLKNNLLLEK------EIFEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA
        ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  VKS-------------VLLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFEK
        +                 LWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFEK
Subjt:  VKS-------------VLLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFEK

Query:  VRNLLRSSLVKLDDALMLFHDF
        VRNLLRSSLVKLDDALMLFHDF
Subjt:  VRNLLRSSLVKLDDALMLFHDF

XP_011651154.1 DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Cucumis sativus]

0.0

89.64

Show/hide

Query:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
        MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDT YLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS

Query:  KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFRPKLKNNLLLEK-----EIFEVPE
        KF+AIASQKLGQDKNCQELLEGLLQNGRLSMEQ+VERAESSGRAGN PI DVVHDSLFKLLNAHFVERCPA      PK++     ++     +I EVPE
Subjt:  KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFRPKLKNNLLLEK-----EIFEVPE

Query:  TLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEAT
        TLEQRLIEAARPVEVLRFSMGDTNPEAEKSEH+SQISGQKRKHD+LEIAQDSG ADG ILWRANYDEFIRCLRHKAC+EHVRSQFDDGVVNVLSA LEAT
Subjt:  TLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEAT

Query:  RSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKV
        RSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRI+EQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK+
Subjt:  RSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKV

Query:  KS-------------VLLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFEKV
                         LWKDEYLYMEKVA+TVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFE V
Subjt:  KS-------------VLLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFEKV

Query:  RNLLRSSLVKLDDALMLFHDF
        RNLLRSSLVKLDDALMLFHDF
Subjt:  RNLLRSSLVKLDDALMLFHDF

XP_038878061.1 DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Benincasa hispida]

3.19e-307

82.38

Show/hide

Query:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
        MVMTQYGIKYAVHI+TAHFGNLVAKVCETLLR+GPLTLRLLIRFTELT SQVNNSLLILIQHNCVQAFT VTEGEFGDAPK DTQYLALFSN+LHRMRFS
Subjt:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS

Query:  KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFRPKLKNNLLLEK------EIFEVP
        KFLAIAS+KL +DK+C+ELLEGLLQNGRLSMEQMVERA+SS  AGNRPIPD+VHDSLFKLLNAHFVERCPA      PK++     +K      +I EVP
Subjt:  KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFRPKLKNNLLLEK------EIFEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA
        ETLEQR++E+ARP+EVLRFSMGDTN EAEKSEHYSQISGQKRKHD+LE+ QDSG AD  ILWRAN+DEFIRCLRHKAC+EHVRSQFDDGVVNVLSA LEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASL++LGCPGMDDY+INLR+I+EQAQ DEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  VKS-------------VLLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFEK
        +                 LWKDEYLYMEKVA+TVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLR A+E+EENKELLSLP DN N+PL+K+    +K
Subjt:  VKS-------------VLLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFEK

Query:  VRNLLRSSLVKLDDALMLFHDF
        VR LL+SSL+KLDDALMLFHDF
Subjt:  VRNLLRSSLVKLDDALMLFHDF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBF3 DNA-directed RNA polymerase III subunit RPC3

7.6e-262

89.64

Show/hide

Query:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
        MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDT YLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS

Query:  KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFRPKLKNNLLLEK-----EIFEVPE
        KF+AIASQKLGQDKNCQELLEGLLQNGRLSMEQ+VERAESSGRAGN PI DVVHDSLFKLLNAHFVERCPA      PK++     ++     +I EVPE
Subjt:  KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFRPKLKNNLLLEK-----EIFEVPE

Query:  TLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEAT
        TLEQRLIEAARPVEVLRFSMGDTNPEAEKSEH+SQISGQKRKHD+LEIAQDSG ADG ILWRANYDEFIRCLRHKAC+EHVRSQFDDGVVNVLSA LEAT
Subjt:  TLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEAT

Query:  RSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKV
        RSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRI+EQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK+
Subjt:  RSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKV

Query:  KS-------------VLLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFEKV
                         LWKDEYLYMEKVA+TVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFE V
Subjt:  KS-------------VLLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFEKV

Query:  RNLLRSSLVKLDDALMLFHDF
        RNLLRSSLVKLDDALMLFHDF
Subjt:  RNLLRSSLVKLDDALMLFHDF

A0A1S3AYY3 DNA-directed RNA polymerase III subunit RPC3

2.6e-270

92.53

Show/hide

Query:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
        MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS

Query:  KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFRPKLKNNLLLEK------EIFEVP
        KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPA      PK++      K      +IFEVP
Subjt:  KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFRPKLKNNLLLEK------EIFEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA
        ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  VKS-------------VLLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFEK
        +                 LWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFEK
Subjt:  VKS-------------VLLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFEK

Query:  VRNLLRSSLVKLDDALMLFHDF
        VRNLLRSSLVKLDDALMLFHDF
Subjt:  VRNLLRSSLVKLDDALMLFHDF

A0A5A7SSU3 DNA-directed RNA polymerase III subunit RPC3

1.4e-244

91.65

Show/hide

Query:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
        MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS

Query:  KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFRPKLKNNLLLEK------EIFEVP
        KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPA      PK++      K      +IFEVP
Subjt:  KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFRPKLKNNLLLEK------EIFEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA
        ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  VKS-------------VLLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEL
        +                 LWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKE+
Subjt:  VKS-------------VLLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEL

A0A5D3DHJ0 DNA-directed RNA polymerase III subunit RPC3

1.4e-244

91.65

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Query:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
        MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS

Query:  KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFRPKLKNNLLLEK------EIFEVP
        KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPA      PK++      K      +IFEVP
Subjt:  KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFRPKLKNNLLLEK------EIFEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA
        ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  VKS-------------VLLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEL
        +                 LWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKE+
Subjt:  VKS-------------VLLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKEL

A0A6J1G256 DNA-directed RNA polymerase III subunit RPC3

6.1e-227

77.39

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Query:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS
        M  TQYGIKYAVHI+TAHFGNLVAKVCETLLR+GPLTLRLL+RFTEL+ SQ+NNSLLILIQHNCVQAFT VTEGEFGDAPK DTQYLALFSNILHRMRFS
Subjt:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFS

Query:  KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFRPKLKNNLLLEK------EIFEVP
        KFLAIAS+KL +DK+C+ELLEGLLQNGRLSMEQ++ERA+SS  AGNRPIPDVV++SL KLLNAHFVERCPA      P+++      K      ++ EVP
Subjt:  KFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFRPKLKNNLLLEK------EIFEVP

Query:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA
         TLEQRL+E+ARP+EV+RFS+G+TN EAE+SEHYS ISGQKRK  +L++ Q+SG ADG ILWRAN+DEF+RCLRHKAC+EHVRSQFDDG VNVLSA LEA
Subjt:  ETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA

Query:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
        TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASL+ALGC GM+DYKINL++I+EQAQ DEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK
Subjt:  TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEK

Query:  VKS-------------VLLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFEK
        +                 LWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLR A+E+E++KELL+LP D    PL K+ +    
Subjt:  VKS-------------VLLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFEK

Query:  VRNLLRSSLVKLDDALMLFHDF
        VR LL SSL+KLDDALMLFHDF
Subjt:  VRNLLRSSLVKLDDALMLFHDF

SwissProt top hits

e value

%identity

Alignment

Q2TBL4 DNA-directed RNA polymerase III subunit RPC3

3.6e-19

24.29

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Query:  MTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKF
        MTQ  IK    ++  HFG +V K+   L+R G   LR++   T  +  QV  +L +LIQHN V          +    +   +Y A  + +L  +R+ ++
Subjt:  MTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKF

Query:  LAIASQKLGQDKNCQELLEGLLQNGRLSMEQMV----ERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFR------PKLKNNLLLEKEIFE
        +  A  K       + ++E LL NG+++M  +V    +R   +   G       V ++  +L++ HFV+RCP             P     ++ EK+++ 
Subjt:  LAIASQKLGQDKNCQELLEGLLQNGRLSMEQMV----ERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFR------PKLKNNLLLEKEIFE

Query:  VPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFL
        VP+     LI   +     R    D +   E      +    K+  D  E   D G     I W+AN D F +  R +A V  V ++ D     ++   L
Subjt:  VPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFL

Query:  EATRSSEKIVKT--EITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRF
           R SE    +    T PLS + I+        + K  + + +TL  D     +   G  G   Y INL + +    T  +ES+V +R+G    R+FR 
Subjt:  EATRSSEKIVKT--EITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRF

Query:  LSKTG----------GLVETEKVKSVL--LWKDEYLYMEKVAITVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELL
        + +             ++  ++ K +L  +  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R   E +ENK LL
Subjt:  LSKTG----------GLVETEKVKSVL--LWKDEYLYMEKVAITVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELL

Q55FJ5 DNA-directed RNA polymerase III subunit rpc3

8.1e-11

27.78

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Query:  YGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTE----LTPSQVNNSLLILIQHNCV---QAFTDVTEGEF-----GDAPKDDTQYLALFSNI
        Y  K A+ I+   FG+ V KV E L+++G  + +++ +       LT  ++   LL+LIQHN V   +    +T+ E      G+    D+ Y A+  N 
Subjt:  YGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTE----LTPSQVNNSLLILIQHNCV---QAFTDVTEGEF-----GDAPKDDTQYLALFSNI

Query:  LHRMRFSKFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVV----HDSLFKLLNAHFVERCPAQNQLFRPKLKNNLLLE
        +HR+RF KF+       G +     +LE L+ +GRL M+ ++++A    R       D +     D+  KL+   F+ R P    +   +  N L  E
Subjt:  LHRMRFSKFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVV----HDSLFKLLNAHFVERCPAQNQLFRPKLKNNLLLE

Q5XIL3 DNA-directed RNA polymerase III subunit RPC3

3.6e-19

23.08

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Query:  MTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKF
        MTQ  IK    ++  HFG +V K+   L+R G   LR++   T+ +  QV  +L +LI HN V          +    +   +Y A  S +L  +R+ ++
Subjt:  MTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKF

Query:  LAIASQKLGQDKNCQELLEGLLQNGRLSMEQMV----ERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCP------AQNQLFRPKLKNNLLLEKEIFE
        +       G     + ++E LL NG+++M  +V    +R   +   G       V ++  +L + HFV+RCP      + +    P   N ++ EK+++ 
Subjt:  LAIASQKLGQDKNCQELLEGLLQNGRLSMEQMV----ERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCP------AQNQLFRPKLKNNLLLEKEIFE

Query:  VPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFL
        VP              ++     G     +++       + + R  D  E   D G     I W+ N D F +  R +A V  V ++ D     ++   L
Subjt:  VPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFL

Query:  EATRSSEKIVKT--EITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRF
           R SE    +    T PLS + I+        + K  + + +TL  D     +   G  G   Y INL + +    T  +ES++ +R+G    R+FR 
Subjt:  EATRSSEKIVKT--EITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRF

Query:  LSKTG----------GLVETEKVKSVL--LWKDEYLYMEKVAITVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELL
        + +             ++  ++ K +L  +  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R   E +ENK LL
Subjt:  LSKTG----------GLVETEKVKSVL--LWKDEYLYMEKVAITVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELL

Q9BUI4 DNA-directed RNA polymerase III subunit RPC3

7.4e-20

23.84

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Query:  MTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKF
        MTQ  IK    ++  HFG +V K+   L+R G   LR++   T  +  QV  +L +L+QHN V          +    +   +Y A  S +L  +R+ ++
Subjt:  MTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKF

Query:  LAIASQKLGQDKNCQELLEGLLQNGRLSMEQMV----ERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFR------PKLKNNLLLEKEIFE
          I + K       + ++E LL NG+L+M  +V    +R   +   G       V ++  +L + HFV+RCP+            P     ++ EK+++ 
Subjt:  LAIASQKLGQDKNCQELLEGLLQNGRLSMEQMV----ERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFR------PKLKNNLLLEKEIFE

Query:  VPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFD---DGVVNVLS
        VP+     LI   +                 +S         K K  +          D  I W+AN D F +  R +A V  V ++ D     +V  + 
Subjt:  VPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFD---DGVVNVLS

Query:  AFLEATRSSEKIVKTEITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFR
           E T SS        T PLS + I+        + K  + + +TL  D     +   G  G   Y INL + +    T  +ES+V +R+G    R+FR
Subjt:  AFLEATRSSEKIVKTEITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFR

Query:  FLSKTG----------GLVETEKVKSVL--LWKDEYLYMEKVAITVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELL
         + +             ++  ++ K +L  +  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R   E +ENK LL
Subjt:  FLSKTG----------GLVETEKVKSVL--LWKDEYLYMEKVAITVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELL

Q9D483 DNA-directed RNA polymerase III subunit RPC3

2.4e-18

22.15

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Query:  MTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKF
        MTQ  IK    ++  HFG +V K+   L+R G   LR++   T+ +  QV  +L +LI HN V          +    +   +Y A  S +L  +R+ ++
Subjt:  MTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKF

Query:  LAIASQKLGQDKNCQELLEGLLQNGRLSMEQMV----ERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCP------AQNQLFRPKLKNNLLLEKEIFE
        +       G     + ++E LL NG+++M  +V    +R   +   G       V ++  +L + HFV+RCP      + ++   P     ++ EK+++ 
Subjt:  LAIASQKLGQDKNCQELLEGLLQNGRLSMEQMV----ERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCP------AQNQLFRPKLKNNLLLEKEIFE

Query:  VPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFL
        VP              ++     G     +++       + + R  D  E + D G     I W+ N D F +  R +A V  V ++ D     ++   L
Subjt:  VPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFL

Query:  EATRSSEKIVKTEITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLS
          +  +        T PLS + I+        + K  + + +TL  D     +   G  G   + INL + +    T  +ES++ +R+G    R+FR + 
Subjt:  EATRSSEKIVKTEITVPLSLDNIYE------EVMKNEVGRSMTL--DRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLS

Query:  KTG----------GLVETEKVKSVL--LWKDEYLYMEKVAITVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELL
        +             ++  ++ K +L  +  + ++ ++++  T P H+      L+ V+  +    +L   Y +  NL  R   E +ENK LL
Subjt:  KTG----------GLVETEKVKSVL--LWKDEYLYMEKVAITVPRHS---LCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELL

Arabidopsis top hits

e value

%identity

Alignment

AT3G49000.1 RNA polymerase III subunit RPC82 family protein

2.4e-111

43.26

Show/hide

Query:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTE--LTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMR
        M M+++GI YA+HI+T  FG++V+KVCE LLRKGPL+ R + R  E  +  ++V + L +LIQHNCVQAF+   E   G   K   QY+ LF+NILHR+R
Subjt:  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTE--LTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMR

Query:  FSKFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFRPK----LKNNLLLEKEIFEVP
        ++KF  I +++L  D  C  +L+GLL NGRL++ Q +ER   S   GN    + + DSL KL+ A FVER P+   +   K     K       +I + P
Subjt:  FSKFLAIASQKLGQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFRPK----LKNNLLLEKEIFEVP

Query:  ETLEQRLIEAARPVEVLRFSM-GDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLE
        ETLE++++EAA PV+ +RF +  + +  +  ++  S I+  KRK  ++    D+  +   ++WR N++EFI  LRHKACVE V+ + D+G   VL A LE
Subjt:  ETLEQRLIEAARPVEVLRFSM-GDTNPEAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLE

Query:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGM----------DDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFL
          RS EK VKT+ + P+S+ +IYEEV+K E GR+M  +RVEA L  L               D Y ++ + I+  AQ DE+E++V++RYG++A+RMFR+L
Subjt:  ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGM----------DDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFL

Query:  SKTGGLVETEKVKSVLL-------------WKDEYLYMEKVAITVP-RHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNN
        S+ G  VET+K+    L             WKD YL+M+K+A+T P  ++  LLW+V++  +   +LDEMYHASLNL LRLAHE+E  KELL LP D   
Subjt:  SKTGGLVETEKVKSVLL-------------WKDEYLYMEKVAITVP-RHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAHEIEENKELLSLPKDNNN

Query:  KPLVKKMHHFEKVRNLLRSSLVKLDDALMLFHDF
         PL +++   +  R LL S++ KLDDA+MLFHDF
Subjt:  KPLVKKMHHFEKVRNLLRSSLVKLDDALMLFHDF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTGATGACTCAGTACGGCATCAAATATGCCGTCCACATTATGACTGCACACTTTGGAAATCTTGTCGCTAAAGTGTGCGAAACCCTGCTTCGAAAGGGACCTCTGAC
TCTGAGACTTCTTATACGATTCACAGAACTTACCCCATCACAGGTCAACAACTCCCTTCTTATTCTCATCCAACATAATTGCGTCCAAGCCTTCACTGATGTGACAGAAG
GTGAGTTTGGAGACGCACCCAAGGATGATACACAATACTTGGCATTGTTTAGTAATATACTTCATCGTATGAGGTTTTCCAAATTCCTGGCAATTGCTTCCCAAAAGCTT
GGGCAAGATAAAAACTGTCAAGAACTTCTCGAGGGTCTGCTGCAGAATGGTAGGCTTTCAATGGAACAAATGGTTGAAAGAGCAGAGTCGAGTGGACGTGCAGGAAACCG
TCCAATTCCAGATGTTGTACATGACAGTCTATTTAAACTTTTGAATGCCCATTTCGTTGAACGCTGTCCAGCCCAGAACCAACTCTTTCGCCCAAAGTTGAAGAACAACC
TCCTCCTAGAAAAAGAGATATTTGAGGTCCCAGAGACCTTAGAACAACGTCTTATAGAAGCTGCACGTCCAGTGGAAGTTCTAAGATTTTCAATGGGTGATACCAACCCA
GAAGCAGAAAAGAGTGAACATTATTCACAAATTTCTGGACAGAAGCGCAAACACGATGAACTAGAGATTGCACAAGATTCTGGACATGCAGATGGTGCTATTCTTTGGCG
TGCCAACTATGACGAGTTTATAAGATGTCTTAGACATAAGGCTTGCGTTGAACATGTTAGATCACAGTTTGATGACGGAGTCGTAAATGTCTTGAGTGCGTTTCTGGAGG
CTACTCGAAGTTCTGAAAAAATTGTGAAAACAGAGATAACAGTACCTTTATCATTGGATAACATATATGAGGAGGTAATGAAGAATGAAGTAGGACGGAGTATGACCTTA
GATCGGGTTGAAGCTTCCCTCGCTGCATTGGGTTGTCCGGGGATGGATGATTATAAAATCAATTTACGGAGGATCGTTGAACAAGCTCAAACTGATGAGGTTGAATCAAT
TGTTTTGAAAAGATATGGAAGGGATGCTTACAGAATGTTCAGATTTCTGTCCAAAACTGGTGGCTTGGTCGAGACAGAAAAGGTAAAGAGTGTTCTGTTGTGGAAGGACG
AGTACCTATACATGGAGAAAGTGGCTATAACAGTACCTAGACATTCACTATGCTTGTTGTGGAGAGTAGACAGATATAACTTATGGGAACACGTTCTGGATGAGATGTAT
CATGCTTCATTGAACTTGCAGCTACGACTGGCTCATGAGATCGAAGAAAACAAAGAGCTTCTAAGTCTTCCAAAAGATAACAACAACAAACCCCTGGTGAAAAAAATGCA
TCATTTTGAGAAAGTCAGAAACCTCCTGCGGTCATCGCTGGTGAAGCTCGATGATGCTCTAATGCTTTTCCATGACTTCTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKFLAIASQKL
GQDKNCQELLEGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAQNQLFRPKLKNNLLLEKEIFEVPETLEQRLIEAARPVEVLRFSMGDTNP
EAEKSEHYSQISGQKRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTL
DRVEASLAALGCPGMDDYKINLRRIVEQAQTDEVESIVLKRYGRDAYRMFRFLSKTGGLVETEKVKSVLLWKDEYLYMEKVAITVPRHSLCLLWRVDRYNLWEHVLDEMY
HASLNLQLRLAHEIEENKELLSLPKDNNNKPLVKKMHHFEKVRNLLRSSLVKLDDALMLFHDF

IVF0024948 (gene) of Melon (IVF77) v1 genome