; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0024982 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024982
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRING/U-box superfamily protein
Genome locationchr11:10746965..10747205
RNA-Seq ExpressionIVF0024982
SyntenyIVF0024982
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038754.1 E3 ubiquitin-protein ligase MBR2 [Cucumis melo var. makuwa]5.41e-1671.15Show/hide
Query:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSSSAFHPFR
        C IC    VS D+VGRL+C+HK+HV CIQQWLRLKN CPICKSS++A HPFR
Subjt:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSSSAFHPFR

XP_004136311.1 uncharacterized protein LOC101218753 [Cucumis sativus]3.97e-1671.15Show/hide
Query:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSSSAFHPFR
        C IC    VS D+VGRLQC+H+YHV CIQQWLRLKN CPICKSS++  HPFR
Subjt:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSSSAFHPFR

XP_016903484.1 PREDICTED: uncharacterized protein LOC103503755 [Cucumis melo]5.43e-1671.15Show/hide
Query:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSSSAFHPFR
        C IC    VS D+VGRL+C+HK+HV CIQQWLRLKN CPICKSS++A HPFR
Subjt:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSSSAFHPFR

XP_022136854.1 probable E3 ubiquitin-protein ligase RHG1A [Momordica charantia]9.04e-1567.31Show/hide
Query:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSSSAFHPFR
        C IC    VS D+VGRL C+HKYHV CIQQWLRLKN CPICK+S+   HPF+
Subjt:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSSSAFHPFR

XP_038898034.1 uncharacterized protein LOC120085870 [Benincasa hispida]8.33e-1760.61Show/hide
Query:  AKGGRENIAPYPLVCQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSSSAFHPFR
        A G  E+++   + C IC    V+ D+VG+LQC HKYHVVCIQQWLRLKN CPICKSS++A HPF+
Subjt:  AKGGRENIAPYPLVCQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSSSAFHPFR

TrEMBL top hitse value%identityAlignment
A0A0A0KVW1 Uncharacterized protein7.8e-1571.43Show/hide
Query:  MAKGGRENIAPYPLVCQICVSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSSSAFHPFR
        MAKG  EN+APYPL  +  VS DKVG LQCKHKYHV  IQQWLRLKN CPI K S++A HPFR
Subjt:  MAKGGRENIAPYPLVCQICVSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSSSAFHPFR

A0A0A0LJG2 RING-type domain-containing protein7.3e-1371.15Show/hide
Query:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSSSAFHPFR
        C IC    VS D+VGRLQC+H+YHV CIQQWLRLKN CPICKSS++  HPFR
Subjt:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSSSAFHPFR

A0A1S4E5I3 uncharacterized protein LOC1035037559.6e-1371.15Show/hide
Query:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSSSAFHPFR
        C IC    VS D+VGRL+C+HK+HV CIQQWLRLKN CPICKSS++A HPFR
Subjt:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSSSAFHPFR

A0A5D3E5H2 E3 ubiquitin-protein ligase MBR29.6e-1371.15Show/hide
Query:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSSSAFHPFR
        C IC    VS D+VGRL+C+HK+HV CIQQWLRLKN CPICKSS++A HPFR
Subjt:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSSSAFHPFR

A0A6J1C5H9 probable E3 ubiquitin-protein ligase RHG1A1.1e-1167.31Show/hide
Query:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSSSAFHPFR
        C IC    VS D+VGRL C+HKYHV CIQQWLRLKN CPICK+S+   HPF+
Subjt:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSSSAFHPFR

SwissProt top hitse value%identityAlignment
F4HZZ4 Receptor homology region, transmembrane domain- and RING domain-containing protein 68.4e-0646.81Show/hide
Query:  LVCQICVSVDKVGR----LQCKHKYHVVCIQQWL-RLKNRCPICKSS
        + C IC+   +VG     L CKHKYH VCI  WL R ++ CP+CK +
Subjt:  LVCQICVSVDKVGR----LQCKHKYHVVCIQQWL-RLKNRCPICKSS

O49500 E3 ubiquitin-protein ligase MBR25.8e-0739.62Show/hide
Query:  AKGGRENIAPYPLVCQICVSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKS
        A G  +++ P  +  +     D +G L C H++H  C++QWL LKN CPICK+
Subjt:  AKGGRENIAPYPLVCQICVSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKS

Q5QLR5 Probable E3 ubiquitin-protein ligase ZFP12.9e-0647.73Show/hide
Query:  LVCQICVSVDK-VGRLQCKHKYHVVCIQQWLRLKNRCPICKSSS
        ++CQ    V + +G L C H+YH  CI+QWL +KN CPICK+++
Subjt:  LVCQICVSVDK-VGRLQCKHKYHVVCIQQWLRLKNRCPICKSSS

Q7XTV7 Probable E3 ubiquitin-protein ligase HIP12.2e-0648.89Show/hide
Query:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSS
        C IC    V  D +G L C H +HV C++QWL +KN CPICK+++
Subjt:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSS

Q9ZQF9 E3 ubiquitin-protein ligase MBR17.6e-0742Show/hide
Query:  ENIAPYPLVCQICVSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSS
        +NI P  +  +  V  D +G L+C H++H  CI+QW+ +KN CPICK+ +
Subjt:  ENIAPYPLVCQICVSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSS

Arabidopsis top hitse value%identityAlignment
AT4G31450.1 RING/U-box superfamily protein7.5e-1053.33Show/hide
Query:  CQICVSV----DKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSS
        C IC       D+VGRL C+H YHV C+Q+WLR+K+ CPICK+++
Subjt:  CQICVSV----DKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSS

AT5G10650.1 RING/U-box superfamily protein2.6e-1055.56Show/hide
Query:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSS
        C IC    V  D++G + C+H YHV C+QQWLR+KN CPICK+S+
Subjt:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSS

AT5G10650.2 RING/U-box superfamily protein2.6e-1055.56Show/hide
Query:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSS
        C IC    V  D++G + C+H YHV C+QQWLR+KN CPICK+S+
Subjt:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSS

AT5G24870.1 RING/U-box superfamily protein2.8e-1261.54Show/hide
Query:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSS-SAFHPF
        C IC    V  D+VG L C+HKYHV C QQWLR+KN CPICK+S+ S  HPF
Subjt:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSS-SAFHPF

AT5G24870.2 RING/U-box superfamily protein2.8e-1261.54Show/hide
Query:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSS-SAFHPF
        C IC    V  D+VG L C+HKYHV C QQWLR+KN CPICK+S+ S  HPF
Subjt:  CQIC----VSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSS-SAFHPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGGGAGGTCGTGAGAATATTGCTCCCTACCCCTTGGTATGCCAAATATGTGTGAGTGTAGATAAAGTTGGCAGATTGCAATGTAAGCACAAGTATCATGTAGT
ATGCATTCAACAATGGTTGAGGTTGAAGAACCGATGCCCCATTTGTAAATCATCATCATCAGCTTTTCACCCTTTCAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGGGAGGTCGTGAGAATATTGCTCCCTACCCCTTGGTATGCCAAATATGTGTGAGTGTAGATAAAGTTGGCAGATTGCAATGTAAGCACAAGTATCATGTAGT
ATGCATTCAACAATGGTTGAGGTTGAAGAACCGATGCCCCATTTGTAAATCATCATCATCAGCTTTTCACCCTTTCAGATGA
Protein sequenceShow/hide protein sequence
MAKGGRENIAPYPLVCQICVSVDKVGRLQCKHKYHVVCIQQWLRLKNRCPICKSSSSAFHPFR