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IVF0024986 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024986
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLate embryogenesis abundant protein (LEA) family protein
Genome locationchr01:22381293..22383758
RNA-Seq ExpressionIVF0024986
SyntenyIVF0024986
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG63946.1 hypothetical protein EZV62_010940 [Acer yangbiense]1.22e-3656.76Show/hide
Query:  MASF-LATSATLPKLQRAGSIIVRNPWSSKVFVSLRPRHGSS--QVSAAADGAAQAVKRTTEKAAE---EVKDKAVSAAEEVTQKTKDVAGKVSETAQDM
        MASF LATS  +PK  +  ++++RNPWSS+VFV +R    SS  + S A D AA+A K+    A E   +VK++A S AE  TQKTKDVAGKVSETAQ +
Subjt:  MASF-LATSATLPKLQRAGSIIVRNPWSSKVFVSLRPRHGSS--QVSAAADGAAQAVKRTTEKAAE---EVKDKAVSAAEEVTQKTKDVAGKVSETAQDM

Query:  AGKAKQTVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNI
          KAKQTV+DAWGSVKDTTQ IK+ V GKAEESK+++K+ A  +K +I
Subjt:  AGKAKQTVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNI

XP_008457975.1 PREDICTED: uncharacterized protein At4g13230 [Cucumis melo]3.43e-8799.32Show/hide
Query:  MASFLATSATLPKLQRAGSIIVRNPWSSKVFVSLRPRHGSSQVSAAADGAAQAVKRTTEKAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGKAKQ
        MASFLATSATLPKLQRAGSIIV NPWSSKVFVSLRPRHGSSQVSAAADGAAQAVKRTTEKAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGKAKQ
Subjt:  MASFLATSATLPKLQRAGSIIVRNPWSSKVFVSLRPRHGSSQVSAAADGAAQAVKRTTEKAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGKAKQ

Query:  TVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKSNC
        TVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKSNC
Subjt:  TVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKSNC

XP_011659168.1 uncharacterized protein At4g13230 [Cucumis sativus]7.07e-7890.48Show/hide
Query:  MASFLATSATLPKLQRAGSIIVRNPWSSKVFVSLRPRHGSSQVSAAA-DGAAQAVKRTTEKAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGKAK
        MASFLATSAT+PKLQRAGSIIV NPWSS VFVSLRPRHGSSQV+AAA D AA  VKRTTE+AAEEVKDKAVSAA+EVTQ+TK+VAGKVSETAQDMAGKAK
Subjt:  MASFLATSATLPKLQRAGSIIVRNPWSSKVFVSLRPRHGSSQVSAAA-DGAAQAVKRTTEKAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGKAK

Query:  QTVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKSNC
        QTVEDAWGSVKDTTQNIK+KVVGKAEESKEAIKDTAENIK NIKSNC
Subjt:  QTVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKSNC

XP_022152517.1 uncharacterized protein At4g13230 [Momordica charantia]8.99e-7081.21Show/hide
Query:  MASFLATSATLPKLQRAGSIIVRNPWSSKVFVSLRPRHGSSQ---VSAAADGAAQAVKRTTEKAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGK
        MAS LA++AT+ KL RAGS++VR+PWSS+VFVS+RPRH SS     +AAADGAAQ VKR TEKAAEEVKDKA SAAEEVTQKTK+VAGKVSETAQD+AGK
Subjt:  MASFLATSATLPKLQRAGSIIVRNPWSSKVFVSLRPRHGSSQ---VSAAADGAAQAVKRTTEKAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGK

Query:  AKQTVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKSNC
        AKQTV++AWGSVKDTTQNIKEKVVGKAEESKEAIKDTA+NIK+ IKSNC
Subjt:  AKQTVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKSNC

XP_038897424.1 uncharacterized protein At4g13230 [Benincasa hispida]4.36e-7285.03Show/hide
Query:  MASFLATSATLPKLQRAGSIIVRNPWSSKVFVSLRPRHGSSQVSAAA-DGAAQAVKRTTEKAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGKAK
        MASFLA SATLPKL RA SI VR PWSSKVFVS+RP+H SS+V+AAA DGAAQ VKR TEKAAE+VKDKAVSAA+EVTQKTK+VAGKVSETAQD+AGKAK
Subjt:  MASFLATSATLPKLQRAGSIIVRNPWSSKVFVSLRPRHGSSQVSAAA-DGAAQAVKRTTEKAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGKAK

Query:  QTVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKSNC
        QTV+DAWGSVKDTTQNIKEKVVGKAEESKEAIKDTA+N+K NIK+NC
Subjt:  QTVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKSNC

TrEMBL top hitse value%identityAlignment
A0A0A0K9U4 Uncharacterized protein3.2e-5990.48Show/hide
Query:  MASFLATSATLPKLQRAGSIIVRNPWSSKVFVSLRPRHGSSQV-SAAADGAAQAVKRTTEKAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGKAK
        MASFLATSAT+PKLQRAGSIIV NPWSS VFVSLRPRHGSSQV +AAAD AA  VKRTTE+AAEEVKDKAVSAA+EVTQ+TK+VAGKVSETAQDMAGKAK
Subjt:  MASFLATSATLPKLQRAGSIIVRNPWSSKVFVSLRPRHGSSQV-SAAADGAAQAVKRTTEKAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGKAK

Query:  QTVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKSNC
        QTVEDAWGSVKDTTQNIK+KVVGKAEESKEAIKDTAENIK NIKSNC
Subjt:  QTVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKSNC

A0A1S3C7D4 uncharacterized protein At4g132302.7e-6699.32Show/hide
Query:  MASFLATSATLPKLQRAGSIIVRNPWSSKVFVSLRPRHGSSQVSAAADGAAQAVKRTTEKAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGKAKQ
        MASFLATSATLPKLQRAGSIIV NPWSSKVFVSLRPRHGSSQVSAAADGAAQAVKRTTEKAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGKAKQ
Subjt:  MASFLATSATLPKLQRAGSIIVRNPWSSKVFVSLRPRHGSSQVSAAADGAAQAVKRTTEKAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGKAKQ

Query:  TVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKSNC
        TVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKSNC
Subjt:  TVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKSNC

A0A5B7AK94 Uncharacterized protein (Fragment)1.1e-2754.32Show/hide
Query:  MASFLATSATLPKLQRAGSIIVRNPWSSKVFVSLRP-------RHGS-----SQVSAAADGA---AQAVKR---TTEKAAEEVKDKAVSAAEEVTQKTKD
        MAS +A + TL K Q    I VR+PWSS+VFV + P       RH S     S  + AAD A   A A K+     +K  +++K+KA S AE+VT K+KD
Subjt:  MASFLATSATLPKLQRAGSIIVRNPWSSKVFVSLRP-------RHGS-----SQVSAAADGA---AQAVKR---TTEKAAEEVKDKAVSAAEEVTQKTKD

Query:  VAGKVSETAQDMAGKAKQTVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKS
        VAGKVSETAQD+A KAKQT +DAWGSVKDTTQ IKE V GKAEESK++IKD+AEN+K ++ +
Subjt:  VAGKVSETAQDMAGKAKQTVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKS

A0A5C7I5X2 Uncharacterized protein1.1e-2756Show/hide
Query:  MAS-FLATSATLPKLQRAGSIIVRNPWSSKVFVSLRPRHGSS--QVSAAADGAAQAVKRTTEKAAE---EVKDKAVSAAEEVTQKTKDVAGKVSETAQDM
        MAS FLATS  +PK  +  ++++RNPWSS+VFV +R    SS  + S A D AA+A K+    A E   +VK++A S AE  TQKTKDVAGKVSETAQ +
Subjt:  MAS-FLATSATLPKLQRAGSIIVRNPWSSKVFVSLRPRHGSS--QVSAAADGAAQAVKRTTEKAAE---EVKDKAVSAAEEVTQKTKDVAGKVSETAQDM

Query:  AGKAKQTVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKS
          KAKQTV+DAWGSVKDTTQ IK+ V GKAEESK+++K+ A  +K +I +
Subjt:  AGKAKQTVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKS

A0A6J1DGG7 uncharacterized protein At4g132304.4e-5381.21Show/hide
Query:  MASFLATSATLPKLQRAGSIIVRNPWSSKVFVSLRPRHGSSQ---VSAAADGAAQAVKRTTEKAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGK
        MAS LA++AT+ KL RAGS++VR+PWSS+VFVS+RPRH SS     +AAADGAAQ VKR TEKAAEEVKDKA SAAEEVTQKTK+VAGKVSETAQD+AGK
Subjt:  MASFLATSATLPKLQRAGSIIVRNPWSSKVFVSLRPRHGSSQ---VSAAADGAAQAVKRTTEKAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGK

Query:  AKQTVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKSNC
        AKQTV++AWGSVKDTTQNIKEKVVGKAEESKEAIKDTA+NIK+ IKSNC
Subjt:  AKQTVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKSNC

SwissProt top hitse value%identityAlignment
Q8LFD5 Uncharacterized protein At4g132301.7e-0941.76Show/hide
Query:  VKRTTEKAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGKAKQTVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKS
        V  TT    + V DKA  A ++V +K  + A  +S+ A ++  KAK T E+AW  VKDTT+ IK+ V GK EE+KE+IK TA+ ++ ++ +
Subjt:  VKRTTEKAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGKAKQTVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKS

Arabidopsis top hitse value%identityAlignment
AT1G04670.1 unknown protein3.8e-0434.31Show/hide
Query:  KVFVSLRPR--------HGSSQVSAAADGAAQAVKRTTEKAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGKAKQTVEDAWGSVKDTTQNIKEKV
        + FVS  PR            +V  AA+   +  K+  E   E ++D A + A  VT+ TKDV  KV+ET   +  KAK +V    G+ K+ T  IK K+
Subjt:  KVFVSLRPR--------HGSSQVSAAADGAAQAVKRTTEKAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGKAKQTVEDAWGSVKDTTQNIKEKV

Query:  VG
        +G
Subjt:  VG

AT4G13230.1 Late embryogenesis abundant protein (LEA) family protein1.2e-1041.76Show/hide
Query:  VKRTTEKAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGKAKQTVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKS
        V  TT    + V DKA  A ++V +K  + A  +S+ A ++  KAK T E+AW  VKDTT+ IK+ V GK EE+KE+IK TA+ ++ ++ +
Subjt:  VKRTTEKAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGKAKQTVEDAWGSVKDTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGCTTTTTGGCAACATCAGCAACCCTTCCAAAGCTTCAACGTGCTGGATCTATTATTGTACGCAACCCATGGAGTTCTAAAGTTTTTGTCTCTCTCAGACCAAG
ACACGGAAGTTCACAGGTTAGTGCAGCAGCTGATGGAGCTGCCCAAGCTGTGAAGCGAACCACCGAGAAGGCCGCCGAAGAAGTAAAAGATAAGGCCGTCTCTGCCGCCG
AGGAGGTGACTCAAAAAACAAAGGATGTAGCAGGGAAGGTGAGTGAAACAGCACAAGATATGGCTGGAAAGGCAAAGCAAACAGTTGAAGATGCATGGGGATCAGTGAAG
GATACAACTCAAAACATTAAAGAGAAAGTGGTTGGCAAAGCTGAAGAATCCAAAGAAGCCATTAAAGACACTGCAGAAAACATAAAAAACAATATCAAGTCTAACTGTTG
A
mRNA sequenceShow/hide mRNA sequence
ATTTTCATCAGCTGAGATCTGAATGTGATTATAAGTATAAAAAAAGTGAAAAATCTAATTAATTAGAGATTAAAAAGAAAATTTGTTGGATTGAAGAATGGCAAGCTTTT
TGGCAACATCAGCAACCCTTCCAAAGCTTCAACGTGCTGGATCTATTATTGTACGCAACCCATGGAGTTCTAAAGTTTTTGTCTCTCTCAGACCAAGACACGGAAGTTCA
CAGGTTAGTGCAGCAGCTGATGGAGCTGCCCAAGCTGTGAAGCGAACCACCGAGAAGGCCGCCGAAGAAGTAAAAGATAAGGCCGTCTCTGCCGCCGAGGAGGTGACTCA
AAAAACAAAGGATGTAGCAGGGAAGGTGAGTGAAACAGCACAAGATATGGCTGGAAAGGCAAAGCAAACAGTTGAAGATGCATGGGGATCAGTGAAGGATACAACTCAAA
ACATTAAAGAGAAAGTGGTTGGCAAAGCTGAAGAATCCAAAGAAGCCATTAAAGACACTGCAGAAAACATAAAAAACAATATCAAGTCTAACTGTTGATCATCCTTTAGA
TTTCTTCTATATTATTATTGCATTTGCGTCTATCAAATTTTCTATAATGCTTTTTCATTAAGTTCCCCATTTCATACAAAAATGGGAAATTTTTGTTTCTCTACCATATT
CAACATTAGTGCCCATTAATTGGTATATTAAATAAAATTCTCACTATTTTCTTTA
Protein sequenceShow/hide protein sequence
MASFLATSATLPKLQRAGSIIVRNPWSSKVFVSLRPRHGSSQVSAAADGAAQAVKRTTEKAAEEVKDKAVSAAEEVTQKTKDVAGKVSETAQDMAGKAKQTVEDAWGSVK
DTTQNIKEKVVGKAEESKEAIKDTAENIKNNIKSNC