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IVF0024991 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024991
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDNA polymerase epsilon catalytic subunit A, putative
Genome locationchr03:25553372..25554139
RNA-Seq ExpressionIVF0024991
SyntenyIVF0024991
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585589.1 hypothetical protein SDJN03_18322, partial [Cucurbita argyrosperma subsp. sororia]1.19e-6478.36Show/hide
Query:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG
        MGSLMGGW+SPVLDPKSVKFKRNRSLTKEEI+AYWKSKRKLEEEHLRAIS+PVDR   + VGIDYKRSSSFP A   A +  F E+ L+RKNLE+L+K G
Subjt:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG

Query:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVAS
        WW RSNSAFLNEPPVLDGA+KA  S YGV DVAS
Subjt:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVAS

XP_004152691.1 uncharacterized protein LOC101215562 [Cucumis sativus]5.70e-8989.8Show/hide
Query:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVD-RYDREKVGIDYKRSSSFPPARD-VAVESKFVENKLDRKNLEELEK
        MGSLMGGW+SPVLDPKSVKFKRNRSLTKEEI+AYWKSKRKLE+EHLRA+SLPVD RYD E VG+DYKRSSSFPPA+D VAVE+KFVENK+DRKNLEEL+K
Subjt:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVD-RYDREKVGIDYKRSSSFPPARD-VAVESKFVENKLDRKNLEELEK

Query:  VGWWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGA
        +GWWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNH+NGVGA
Subjt:  VGWWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGA

XP_008444729.1 PREDICTED: uncharacterized protein LOC103487979 [Cucumis melo]5.50e-103100Show/hide
Query:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG
        MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG
Subjt:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG

Query:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGACLH
        WWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGACLH
Subjt:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGACLH

XP_023002545.1 uncharacterized protein LOC111496358 [Cucurbita maxima]5.92e-6578.36Show/hide
Query:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG
        MGSLMGGW+SPVLDPKSVKFKRNRSLTKEEI+AYWKSKRKLEEEHLRAIS+PVDR   + VGIDYKRSSSFP A   A +  F E+ L+RKNLE+L+K G
Subjt:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG

Query:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVAS
        WW RSNSAFLNEPPVLDGA+KA  S YGV DVAS
Subjt:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVAS

XP_038886573.1 uncharacterized protein LOC120076743 [Benincasa hispida]1.63e-8181.51Show/hide
Query:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRY-DREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKV
        MGSLM GW+SPVLDPKSVKFKRNRSLTK+EI+AYWKSK+K EEEHLRAIS+PVDRY DRE VGIDYKRSSSFPPA+DV+ E++F EN L+R+NLE+L+K+
Subjt:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRY-DREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKV

Query:  GWWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGA
        GWWTRSNSAFLNEPPVLDGA+K   SLYGVADVASCKLNH+NGVG+
Subjt:  GWWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGA

TrEMBL top hitse value%identityAlignment
A0A0A0LRI3 Uncharacterized protein9.9e-6989.8Show/hide
Query:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPV-DRYDREKVGIDYKRSSSFPPAR-DVAVESKFVENKLDRKNLEELEK
        MGSLMGGW+SPVLDPKSVKFKRNRSLTKEEI+AYWKSKRKLE+EHLRA+SLPV DRYD E VG+DYKRSSSFPPA+ DVAVE+KFVENK+DRKNLEEL+K
Subjt:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPV-DRYDREKVGIDYKRSSSFPPAR-DVAVESKFVENKLDRKNLEELEK

Query:  VGWWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGA
        +GWWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNH+NGVGA
Subjt:  VGWWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGA

A0A1S3BBS7 uncharacterized protein LOC1034879792.8e-79100Show/hide
Query:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG
        MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG
Subjt:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG

Query:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGACLH
        WWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGACLH
Subjt:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGACLH

A0A5A7VD66 Putative DNA polymerase epsilon catalytic subunit A2.8e-79100Show/hide
Query:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG
        MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG
Subjt:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG

Query:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGACLH
        WWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGACLH
Subjt:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVASCKLNHNNGVGACLH

A0A6J1GI71 uncharacterized protein LOC1114544243.9e-4977.61Show/hide
Query:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG
        MGSLMGGW+SPVLDPKSVKFKRNRSLTKEEI+AYWKSKRKLEEEHLRAIS+PV   D + VGIDYKRSSSFP A   A +  F E+ L+RKNLE+L+K G
Subjt:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG

Query:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVAS
        WW RSNSAFLNEPPVLDGA+KA  S YGV DVAS
Subjt:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVAS

A0A6J1KP90 uncharacterized protein LOC1114963583.6e-5078.36Show/hide
Query:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG
        MGSLMGGW+SPVLDPKSVKFKRNRSLTKEEI+AYWKSKRKLEEEHLRAIS+PV   DR+ VGIDYKRSSSFP A   A +  F E+ L+RKNLE+L+K G
Subjt:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVG

Query:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVAS
        WW RSNSAFLNEPPVLDGA+KA  S YGV DVAS
Subjt:  WWTRSNSAFLNEPPVLDGASKACVSLYGVADVAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19530.1 unknown protein2.1e-1539.55Show/hide
Query:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRK-LEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKV
        MGSLM GW S V DPKSV  +R +SLT+EEID +WK+K+K  EEEH++A S  V +                  A+  A E K V++  + ++    +  
Subjt:  MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRK-LEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKV

Query:  GWWTRSNSAFLNEPPVLDGASKACVSLYGVADVA
        GWW ++  AFLNEP   +G     VS + VA +A
Subjt:  GWWTRSNSAFLNEPPVLDGASKACVSLYGVADVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTCTCTAATGGGCGGATGGAGTTCTCCCGTTCTCGATCCTAAATCAGTCAAGTTCAAGAGAAATCGGTCACTTACGAAAGAAGAAATCGACGCATACTGGAAATC
AAAGAGGAAATTGGAGGAAGAACATCTCAGAGCGATTTCTTTGCCGGTGGATCGTTATGATCGCGAAAAAGTCGGAATAGACTACAAAAGATCGAGTTCGTTTCCGCCGG
CGAGGGACGTTGCGGTGGAATCAAAATTTGTAGAGAACAAATTGGACAGGAAAAACCTAGAGGAATTGGAAAAAGTTGGCTGGTGGACGAGGAGCAATTCGGCGTTTCTG
AATGAACCGCCAGTCCTTGACGGCGCTTCAAAAGCTTGCGTGTCGTTGTACGGCGTCGCCGACGTGGCCTCATGTAAGTTGAACCACAATAATGGAGTCGGTGCTTGCTT
ACACTGA
mRNA sequenceShow/hide mRNA sequence
CTCAATTTTTTCCGTGAACCTAAAATTTCAGTAGTAGAGAAATGGGCTCTCTAATGGGCGGATGGAGTTCTCCCGTTCTCGATCCTAAATCAGTCAAGTTCAAGAGAAAT
CGGTCACTTACGAAAGAAGAAATCGACGCATACTGGAAATCAAAGAGGAAATTGGAGGAAGAACATCTCAGAGCGATTTCTTTGCCGGTGGATCGTTATGATCGCGAAAA
AGTCGGAATAGACTACAAAAGATCGAGTTCGTTTCCGCCGGCGAGGGACGTTGCGGTGGAATCAAAATTTGTAGAGAACAAATTGGACAGGAAAAACCTAGAGGAATTGG
AAAAAGTTGGCTGGTGGACGAGGAGCAATTCGGCGTTTCTGAATGAACCGCCAGTCCTTGACGGCGCTTCAAAAGCTTGCGTGTCGTTGTACGGCGTCGCCGACGTGGCC
TCATGTAAGTTGAACCACAATAATGGAGTCGGTGCTTGCTTACACTGAAAGTGTGAAAAAAAAAAGAAGAAGAGA
Protein sequenceShow/hide protein sequence
MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRYDREKVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVGWWTRSNSAFL
NEPPVLDGASKACVSLYGVADVASCKLNHNNGVGACLH