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IVF0024995 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024995
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSpc97/Spc98 family of spindle pole body (SBP) component
Genome locationchr02:2817803..2820686
RNA-Seq ExpressionIVF0024995
SyntenyIVF0024995
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0016020 - membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0005319 - lipid transporter activity (molecular function)
GO:0042626 - ATPase-coupled transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055731.1 hypothetical protein E6C27_scaffold181G001160 [Cucumis melo var. makuwa]6.31e-4059.17Show/hide
Query:  MRDLQIIAKRNRVKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQSAT
        M +   I K NRV+ +S  +L    ES          EL DLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIG V LMEHLKGELRTSDVSDLSQSAT
Subjt:  MRDLQIIAKRNRVKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQSAT

Query:  LNACNLLDSNKEETRKKVGTIYKLLVCIVQEHILEKIEKCHVNYCFVILILHINRGKKLLTTTLPFWYS
        LNACNLLDSN E    K+ +I +++  I  +   +K  K               RGKKLLTTTL FWYS
Subjt:  LNACNLLDSNKEETRKKVGTIYKLLVCIVQEHILEKIEKCHVNYCFVILILHINRGKKLLTTTLPFWYS

KAA0068078.1 uncharacterized protein E6C27_scaffold238G00280 [Cucumis melo var. makuwa]5.40e-3167.54Show/hide
Query:  MRDLQIIAKRNRVKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQSAT
        M +   I K NR++ +S  +L    ES          EL DLLISIKMLVLQRAKAIGHENLAEKFDLKTLR IG V LMEHLKGELRTSDV+DLSQSA 
Subjt:  MRDLQIIAKRNRVKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQSAT

Query:  LNACNLLDSNKEET
        LNACNLLDSN E++
Subjt:  LNACNLLDSNKEET

XP_008450999.1 PREDICTED: uncharacterized protein LOC103492413 [Cucumis melo]1.30e-3471.68Show/hide
Query:  MRDLQIIAKRNRVKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQSAT
        M +   I K NRV+ +S  +L    ES          EL DLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIG V LMEHLKGELRTSDVSDLSQSAT
Subjt:  MRDLQIIAKRNRVKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQSAT

Query:  LNACNLLDSNKEE
        LNACNLLDSN E+
Subjt:  LNACNLLDSNKEE

XP_008460383.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo]6.83e-3167.54Show/hide
Query:  MRDLQIIAKRNRVKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQSAT
        M +   I K NR++ +S  +L    ES          EL DLLISIKMLVLQRAKAIGHENLAEKFDLKTLR IG V LMEHLKGELRTSDV+DLSQSA 
Subjt:  MRDLQIIAKRNRVKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQSAT

Query:  LNACNLLDSNKEET
        LNACNLLDSN E++
Subjt:  LNACNLLDSNKEET

XP_011651663.2 uncharacterized protein LOC101210446 [Cucumis sativus]3.00e-3067.26Show/hide
Query:  MRDLQIIAKRNRVKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQSAT
        M +   I K NR++ +S  +L    ES          EL DLLISIKMLVLQRAKAIGHENLAEKFDL+TLRAIG V LMEHLKG+LRTSDVSDLSQS T
Subjt:  MRDLQIIAKRNRVKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQSAT

Query:  LNACNLLDSNKEE
         NACNLLDSN E+
Subjt:  LNACNLLDSNKEE

TrEMBL top hitse value%identityAlignment
A0A0A0LBP9 Uncharacterized protein5.5e-2364.81Show/hide
Query:  IIAKRNRVKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQSATLNACN
        +I ++  ++  ++I  ++ +E        ++ EL DLLISIKMLVLQRAKAIGHENLAEKFDL+TLRAIG V LMEHLKG+LRTSDVSDLSQS T NACN
Subjt:  IIAKRNRVKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQSATLNACN

Query:  LLDSNKEE
        LLDSN E+
Subjt:  LLDSNKEE

A0A1S3BQH9 uncharacterized protein LOC1034924133.1e-2671.68Show/hide
Query:  MRDLQIIAKRNRVKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQSAT
        M +   I K NRV+ +S  +L    ES          EL DLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIG V LMEHLKGELRTSDVSDLSQSAT
Subjt:  MRDLQIIAKRNRVKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQSAT

Query:  LNACNLLDSNKEE
        LNACNLLDSN E+
Subjt:  LNACNLLDSNKEE

A0A1S3CBX7 uncharacterized protein LOC1034992201.9e-2367.54Show/hide
Query:  MRDLQIIAKRNRVKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQSAT
        M +   I K NR++ +S  +L    ES          EL DLLISIKMLVLQRAKAIGHENLAEKFDLKTLR IG V LMEHLKGELRTSDV+DLSQSA 
Subjt:  MRDLQIIAKRNRVKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQSAT

Query:  LNACNLLDSNKEET
        LNACNLLDSN E++
Subjt:  LNACNLLDSNKEET

A0A5A7UQA1 Uncharacterized protein7.2e-3159.17Show/hide
Query:  MRDLQIIAKRNRVKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQSAT
        M +   I K NRV+ +S  +L    ES          EL DLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIG V LMEHLKGELRTSDVSDLSQSAT
Subjt:  MRDLQIIAKRNRVKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQSAT

Query:  LNACNLLDSNKEETRKKVGTIYKLLVCIVQEHILEKIEKCHVNYCFVILILHINRGKKLLTTTLPFWYS
        LNACNLLDSN E    K+ +I +++  I  +   +K  K               RGKKLLTTTL FWYS
Subjt:  LNACNLLDSNKEETRKKVGTIYKLLVCIVQEHILEKIEKCHVNYCFVILILHINRGKKLLTTTLPFWYS

A0A5D3DR89 Uncharacterized protein1.9e-2367.54Show/hide
Query:  MRDLQIIAKRNRVKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQSAT
        M +   I K NR++ +S  +L    ES          EL DLLISIKMLVLQRAKAIGHENLAEKFDLKTLR IG V LMEHLKGELRTSDV+DLSQSA 
Subjt:  MRDLQIIAKRNRVKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQSAT

Query:  LNACNLLDSNKEET
        LNACNLLDSN E++
Subjt:  LNACNLLDSNKEET

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G80245.1 Spc97 / Spc98 family of spindle pole body (SBP) component2.6e-0946.05Show/hide
Query:  DLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSD---VSDLSQSATLNACNLLDSNKEE
        DLLIS+K L +QRAK  GH+ LA+KFDLK LR++G V LMEH +  ++       S + Q   L+ CNLL ++ ++
Subjt:  DLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSD---VSDLSQSATLNACNLLDSNKEE

AT1G80245.2 Spc97 / Spc98 family of spindle pole body (SBP) component2.6e-0946.05Show/hide
Query:  DLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSD---VSDLSQSATLNACNLLDSNKEE
        DLLIS+K L +QRAK  GH+ LA+KFDLK LR++G V LMEH +  ++       S + Q   L+ CNLL ++ ++
Subjt:  DLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSD---VSDLSQSATLNACNLLDSNKEE

AT1G80245.3 Spc97 / Spc98 family of spindle pole body (SBP) component2.6e-0946.05Show/hide
Query:  DLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSD---VSDLSQSATLNACNLLDSNKEE
        DLLIS+K L +QRAK  GH+ LA+KFDLK LR++G V LMEH +  ++       S + Q   L+ CNLL ++ ++
Subjt:  DLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSD---VSDLSQSATLNACNLLDSNKEE

AT4G00695.1 FUNCTIONS IN: molecular_function unknown8.5e-0838.89Show/hide
Query:  VKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENL-AEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQS-----ATLNACNL
        ++ +S+I  +   +    F   ++ EL DLLIS+K LV++RAK  G E+L A+KFDLK LR++G V LME+++   R  D + L+ S     + L++CNL
Subjt:  VKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENL-AEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQS-----ATLNACNL

Query:  LDSNKEET
        L ++ ++T
Subjt:  LDSNKEET

AT4G00695.2 FUNCTIONS IN: molecular_function unknown8.5e-0838.89Show/hide
Query:  VKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENL-AEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQS-----ATLNACNL
        ++ +S+I  +   +    F   ++ EL DLLIS+K LV++RAK  G E+L A+KFDLK LR++G V LME+++   R  D + L+ S     + L++CNL
Subjt:  VKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENL-AEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQS-----ATLNACNL

Query:  LDSNKEET
        L ++ ++T
Subjt:  LDSNKEET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGACTTGCAAATCATCGCGAAACGAAATCGAGTTAAATCAGTTTCGAAGATTTACCTCCACCGTGCTCTAGAATCGCCTCCAATTTTTGATATCTACAATCAATT
AGAGCTTAGAGACCTGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAAAAATTTGATTTGAAGACGCTACGTGCTA
TTGGTAGGGTTTGTTTGATGGAACATCTTAAAGGAGAACTTAGGACATCAGATGTTTCGGATCTTTCTCAATCTGCTACCTTAAATGCGTGCAACTTGTTAGACAGCAAT
AAGGAAGAAACCAGGAAAAAGGTTGGTACGATTTACAAGTTGTTGGTTTGTATTGTTCAAGAGCACATTTTGGAAAAAATAGAGAAATGTCATGTTAATTATTGCTTTGT
TATCTTAATACTTCATATTAACAGGGGAAAAAAACTTTTGACAACTACATTACCCTTTTGGTATTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGAGACTTGCAAATCATCGCGAAACGAAATCGAGTTAAATCAGTTTCGAAGATTTACCTCCACCGTGCTCTAGAATCGCCTCCAATTTTTGATATCTACAATCAATT
AGAGCTTAGAGACCTGCTGATTAGCATTAAAATGCTAGTTCTCCAACGTGCAAAAGCAATTGGTCATGAAAATTTAGCTGAAAAATTTGATTTGAAGACGCTACGTGCTA
TTGGTAGGGTTTGTTTGATGGAACATCTTAAAGGAGAACTTAGGACATCAGATGTTTCGGATCTTTCTCAATCTGCTACCTTAAATGCGTGCAACTTGTTAGACAGCAAT
AAGGAAGAAACCAGGAAAAAGGTTGGTACGATTTACAAGTTGTTGGTTTGTATTGTTCAAGAGCACATTTTGGAAAAAATAGAGAAATGTCATGTTAATTATTGCTTTGT
TATCTTAATACTTCATATTAACAGGGGAAAAAAACTTTTGACAACTACATTACCCTTTTGGTATTCGTAAGGCCTTCTATTCATATTAATTTCATCGTGCATTGGATAGA
TAAGTAGTAGATCAGTTTGATCATGTCTGTTCCTAATATTTTTGCTCCGTCCTCTGGAGTGGTTGTTGTTTCCATTGCGTTTTCTTATTTAGGGTGTTTAGAATCACGTT
GGGAAGATGTGAGGCCTCATGATCATTATATGATACACGAGTTACTTCTCTCGTATGCAATTAGTATAGAGATGGAGATATTCATGTTTATCCTATATGATATTAAATAT
ATGAAGTCCCCTCGGGTATTGTTCCAAAAAAGAAAAAAGAAAAATTTGACCCAAGATAGATGAACCCGAAGAGATCTTGAGAGAGAGGAGGTATGCTGAGGATCTTGCAT
CAGAAAAACTTACCATCATACATGAGTTACCCCGCTCATTATCAACTTATTTTTATAGGAAGTTCTAAGAAGTACTTACTTTCTCACCCCTACATTCTCTGTTTTCTGCC
TTCCTCAAGTGATCGGATTCATTCTGTTCTATTTACAATCGTAGATTTACTAATTCATTTGAGACATAGTCTCAGTAAATA
Protein sequenceShow/hide protein sequence
MRDLQIIAKRNRVKSVSKIYLHRALESPPIFDIYNQLELRDLLISIKMLVLQRAKAIGHENLAEKFDLKTLRAIGRVCLMEHLKGELRTSDVSDLSQSATLNACNLLDSN
KEETRKKVGTIYKLLVCIVQEHILEKIEKCHVNYCFVILILHINRGKKLLTTTLPFWYS