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IVF0024997 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024997
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionElf4 domain-containing protein
Genome locationchr10:9217032..9218131
RNA-Seq ExpressionIVF0024997
SyntenyIVF0024997
Gene Ontology termsGO:0000122 - negative regulation of transcription by RNA polymerase II (biological process)
GO:0009649 - entrainment of circadian clock (biological process)
GO:0009909 - regulation of flower development (biological process)
GO:0010017 - red or far-red light signaling pathway (biological process)
GO:0010114 - response to red light (biological process)
GO:0042753 - positive regulation of circadian rhythm (biological process)
GO:0048573 - photoperiodism, flowering (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005667 - transcription factor complex (cellular component)
GO:0042803 - protein homodimerization activity (molecular function)
InterPro domainsIPR009741 - Protein EARLY FLOWERING 4 domain
IPR040462 - Protein EARLY FLOWERING 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031907.1 protein EARLY FLOWERING 4 [Cucumis melo var. makuwa]1.70e-83100Show/hide
Query:  MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
        MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM

Query:  YSDFSSDFSTAFHNHKPRSGKRGTTNPDA
        YSDFSSDFSTAFHNHKPRSGKRGTTNPDA
Subjt:  YSDFSSDFSTAFHNHKPRSGKRGTTNPDA

KAE8648025.1 hypothetical protein Csa_005775 [Cucumis sativus]1.27e-7196.61Show/hide
Query:  MKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTA
        MKPSATTTTTTTTTTSDD PH AFPDEYD EVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTA
Subjt:  MKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTA

Query:  FHNHKPRSGKRGTTNPDA
        FHNHKPR+GKRGTTNPDA
Subjt:  FHNHKPRSGKRGTTNPDA

XP_004149248.1 protein EARLY FLOWERING 4 [Cucumis sativus]5.42e-8096.9Show/hide
Query:  MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
        MADNNPRRKSKMKPSATTTTTTTTTTSDD PH AFPDEYD EVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM

Query:  YSDFSSDFSTAFHNHKPRSGKRGTTNPDA
        YSDFSSDFSTAFHNHKPR+GKRGTTNPDA
Subjt:  YSDFSSDFSTAFHNHKPRSGKRGTTNPDA

XP_008463236.2 PREDICTED: uncharacterized protein LOC103501440 [Cucumis melo]1.51e-138100Show/hide
Query:  MYSLSFTSLFPRAVSFAWGQWLHVPSYTDNGSSQYLVITTAFFPSSIKPFPFFQKTQSNYPIPNYPFPFMADNNPRRKSKMKPSATTTTTTTTTTSDDPP
        MYSLSFTSLFPRAVSFAWGQWLHVPSYTDNGSSQYLVITTAFFPSSIKPFPFFQKTQSNYPIPNYPFPFMADNNPRRKSKMKPSATTTTTTTTTTSDDPP
Subjt:  MYSLSFTSLFPRAVSFAWGQWLHVPSYTDNGSSQYLVITTAFFPSSIKPFPFFQKTQSNYPIPNYPFPFMADNNPRRKSKMKPSATTTTTTTTTTSDDPP

Query:  HDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSGKRGTTNPDA
        HDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSGKRGTTNPDA
Subjt:  HDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSGKRGTTNPDA

XP_038892867.1 protein EARLY FLOWERING 4-like [Benincasa hispida]2.90e-7392.37Show/hide
Query:  MADNNPRRKSKMKPSATTTTTTTTTT-SDDPPHDA-FPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVV
        MADNNPRRKSKMKPSATTTTTTTTTT SDD PHD  FPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVV
Subjt:  MADNNPRRKSKMKPSATTTTTTTTTT-SDDPPHDA-FPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVV

Query:  SMYSDFSSDFSTAFHNHKPRSGKRGTTNPDA
        SMYSDFSSDFS+AF NHKPR+GKRG+ NP+A
Subjt:  SMYSDFSSDFSTAFHNHKPRSGKRGTTNPDA

TrEMBL top hitse value%identityAlignment
A0A0A0KM35 Elf4 domain-containing protein2.1e-6196.9Show/hide
Query:  MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
        MADNNPRRKSKMKPSATTTTTTTTTTSDD PH AFPDEYD EVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM

Query:  YSDFSSDFSTAFHNHKPRSGKRGTTNPDA
        YSDFSSDFSTAFHNHKPR+GKRGTTNPDA
Subjt:  YSDFSSDFSTAFHNHKPRSGKRGTTNPDA

A0A1S3CIT1 uncharacterized protein LOC1035014401.9e-107100Show/hide
Query:  MYSLSFTSLFPRAVSFAWGQWLHVPSYTDNGSSQYLVITTAFFPSSIKPFPFFQKTQSNYPIPNYPFPFMADNNPRRKSKMKPSATTTTTTTTTTSDDPP
        MYSLSFTSLFPRAVSFAWGQWLHVPSYTDNGSSQYLVITTAFFPSSIKPFPFFQKTQSNYPIPNYPFPFMADNNPRRKSKMKPSATTTTTTTTTTSDDPP
Subjt:  MYSLSFTSLFPRAVSFAWGQWLHVPSYTDNGSSQYLVITTAFFPSSIKPFPFFQKTQSNYPIPNYPFPFMADNNPRRKSKMKPSATTTTTTTTTTSDDPP

Query:  HDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSGKRGTTNPDA
        HDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSGKRGTTNPDA
Subjt:  HDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSGKRGTTNPDA

A0A5A7SR92 Protein EARLY FLOWERING 44.4e-64100Show/hide
Query:  MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
        MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM

Query:  YSDFSSDFSTAFHNHKPRSGKRGTTNPDA
        YSDFSSDFSTAFHNHKPRSGKRGTTNPDA
Subjt:  YSDFSSDFSTAFHNHKPRSGKRGTTNPDA

A0A6J1GYX8 protein EARLY FLOWERING 4-like4.6e-5387.6Show/hide
Query:  MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
        MAD NPRRKSK KPSATTTTTTTTTTSDD  HD FPDE DA+VWASFDQTFRQVQSVLDRNR LIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM

Query:  YSDFSSDFSTAFHNHKPRSGKRGTTNPDA
        YSDFSSDFS+ F+N+K R+GKRG++NPDA
Subjt:  YSDFSSDFSTAFHNHKPRSGKRGTTNPDA

A0A6J1IH33 protein EARLY FLOWERING 4-like8.7e-5286.05Show/hide
Query:  MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
        MA+ N RRKSK KPSATTTTTTTTTTSDD  HD FPDE D +VWASFDQTFRQVQSVLDRNR LIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM

Query:  YSDFSSDFSTAFHNHKPRSGKRGTTNPDA
        YSDFSSDFS+ F+NHK R+GKRG++NPDA
Subjt:  YSDFSSDFSTAFHNHKPRSGKRGTTNPDA

SwissProt top hitse value%identityAlignment
O04211 Protein EARLY FLOWERING 41.1e-2268.83Show/hide
Query:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHK
        D  +W + D+ FRQVQSVLDRNR+LIQQVN+NHQSR+  NM  NVALIQELNGNISKVV+MYSD ++ FS+ FH  K
Subjt:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHK

O80877 Protein ELF4-LIKE 12.1e-1551.16Show/hide
Query:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSGKRGTT
        D EVW +    F++ Q  LD+NR LIQ+VNENH SRIP N+  NV LI E+NGNIS+V+ +YSD S +F+  F + + R+ K G T
Subjt:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSGKRGTT

Q570U6 Protein ELF4-LIKE 41.1e-1147.14Show/hide
Query:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS
        D ++  SF ++F  VQ +LD+NR LI ++N+NH+S+ P N+  NV LI+ELN NI +V S+Y D S  F+
Subjt:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS

Q8S8F5 Protein ELF4-LIKE 35.8e-1339.33Show/hide
Query:  EYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSGKRGTTN
        + D ++  +F+++F QVQ++LD NR LI ++N+NH+S+IP N+  NV LI+ELN N+ +V  +Y D S++FS +           G  N
Subjt:  EYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSGKRGTTN

Q94BS8 Protein ELF4-LIKE 24.6e-1041.25Show/hide
Query:  HDAFPDEY--DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS
        +  F + Y  D ++  +F ++F QVQ +LD+NR LI ++N+NH+S+   ++  NV LI+ELN NI  V S+Y D S  F+
Subjt:  HDAFPDEY--DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS

Arabidopsis top hitse value%identityAlignment
AT1G17455.1 ELF4-like 47.8e-1347.14Show/hide
Query:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS
        D ++  SF ++F  VQ +LD+NR LI ++N+NH+S+ P N+  NV LI+ELN NI +V S+Y D S  F+
Subjt:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS

AT1G17455.2 ELF4-like 47.8e-1347.14Show/hide
Query:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS
        D ++  SF ++F  VQ +LD+NR LI ++N+NH+S+ P N+  NV LI+ELN NI +V S+Y D S  F+
Subjt:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS

AT2G06255.1 ELF4-like 34.2e-1439.33Show/hide
Query:  EYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSGKRGTTN
        + D ++  +F+++F QVQ++LD NR LI ++N+NH+S+IP N+  NV LI+ELN N+ +V  +Y D S++FS +           G  N
Subjt:  EYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSGKRGTTN

AT2G29950.1 ELF4-like 11.5e-1651.16Show/hide
Query:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSGKRGTT
        D EVW +    F++ Q  LD+NR LIQ+VNENH SRIP N+  NV LI E+NGNIS+V+ +YSD S +F+  F + + R+ K G T
Subjt:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSGKRGTT

AT2G40080.1 Protein of unknown function (DUF1313)7.6e-2468.83Show/hide
Query:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHK
        D  +W + D+ FRQVQSVLDRNR+LIQQVN+NHQSR+  NM  NVALIQELNGNISKVV+MYSD ++ FS+ FH  K
Subjt:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTCTCTCTCTTTTACATCTTTATTCCCACGCGCTGTTAGTTTCGCGTGGGGCCAATGGCTCCACGTCCCGAGCTACACCGATAATGGTTCCTCTCAGTATTTAGT
CATCACCACCGCCTTTTTCCCTTCTTCAATCAAACCTTTCCCTTTTTTTCAAAAAACTCAATCCAACTATCCAATACCAAACTACCCTTTTCCTTTCATGGCCGATAACA
ATCCCCGCCGCAAATCCAAAATGAAGCCTTCAGCAACCACCACCACCACCACTACCACCACCACCAGCGACGACCCCCCACATGACGCTTTTCCTGACGAATACGACGCC
GAGGTATGGGCCTCTTTTGACCAAACCTTCCGGCAAGTCCAATCAGTGCTGGACAGAAACAGAACTCTGATTCAACAAGTGAATGAGAATCACCAATCTCGAATCCCAAG
CAACATGGTTGACAACGTTGCTTTAATCCAAGAACTTAATGGAAACATCTCTAAAGTTGTTTCCATGTACTCTGATTTCTCCTCTGATTTCTCCACTGCTTTCCATAACC
ACAAACCCAGAAGTGGTAAAAGAGGCACCACCAACCCAGATGCTTGA
mRNA sequenceShow/hide mRNA sequence
CAGCCAAGTTTTTGAAAACGATGATGCAACCTTTAACCCCCTTGTGCTTGCAATCTTGACCTGACTCCTCGAGTTCAAGTTCAACTAATCTAATACAATAGTGATTTCAC
ATGTTAGAACTCACTATATCAATGTCTATTTACACAACAAATATAGATACTAATGGACTACTTCCGAAAGATATTTTGTCATTAGTTTGGGATTTAAAAGTTTGACTCTA
AAGATATAAATTTATTTATGTATTCTCTCTCTTTTACATCTTTATTCCCACGCGCTGTTAGTTTCGCGTGGGGCCAATGGCTCCACGTCCCGAGCTACACCGATAATGGT
TCCTCTCAGTATTTAGTCATCACCACCGCCTTTTTCCCTTCTTCAATCAAACCTTTCCCTTTTTTTCAAAAAACTCAATCCAACTATCCAATACCAAACTACCCTTTTCC
TTTCATGGCCGATAACAATCCCCGCCGCAAATCCAAAATGAAGCCTTCAGCAACCACCACCACCACCACTACCACCACCACCAGCGACGACCCCCCACATGACGCTTTTC
CTGACGAATACGACGCCGAGGTATGGGCCTCTTTTGACCAAACCTTCCGGCAAGTCCAATCAGTGCTGGACAGAAACAGAACTCTGATTCAACAAGTGAATGAGAATCAC
CAATCTCGAATCCCAAGCAACATGGTTGACAACGTTGCTTTAATCCAAGAACTTAATGGAAACATCTCTAAAGTTGTTTCCATGTACTCTGATTTCTCCTCTGATTTCTC
CACTGCTTTCCATAACCACAAACCCAGAAGTGGTAAAAGAGGCACCACCAACCCAGATGCTTGAACAATTCAACCCACAGCAAAAAACAAAAAACAAAAACAGAAACAAA
TTTCCCCAATTACCTCATTTTCACTCCAGACCATTGTTTTTCTATCCGTTTCATCATCATTCATCATCGTCATCAGAATCATCATCAGTATCAGCATCGGCATTGGTTAG
AAATAAAAGTTGGGTTAGGTTGTGTGGGAAATGTGAGAGATTGAAGAACTTCTCACAGGTGGCGTATGTGTATGCTTGTGGTGGTGTGAGTTTTTTTTTTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MYSLSFTSLFPRAVSFAWGQWLHVPSYTDNGSSQYLVITTAFFPSSIKPFPFFQKTQSNYPIPNYPFPFMADNNPRRKSKMKPSATTTTTTTTTTSDDPPHDAFPDEYDA
EVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRSGKRGTTNPDA