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IVF0025103 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025103
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr06:2045860..2046163
RNA-Seq ExpressionIVF0025103
SyntenyIVF0025103
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]1.90e-2698.21Show/hide
Query:  MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS
        MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHP+GRGLSALEVPDVPPLS
Subjt:  MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS

KAA0050516.1 hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]5.20e-2696.43Show/hide
Query:  MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS
        MAPNLEEEVKEHKDES++SKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS
Subjt:  MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS

KAA0055892.1 hypothetical protein E6C27_scaffold438G00100 [Cucumis melo var. makuwa]7.06e-2696.43Show/hide
Query:  MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS
        MAPNLEEEVK+HKDESDSSKSDRHWKRPLKKAKVSGDHP+GRGLSALEVPDVPPLS
Subjt:  MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS

KAA0063075.1 hypothetical protein E6C27_scaffold468G001930 [Cucumis melo var. makuwa]9.81e-2796.43Show/hide
Query:  MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS
        MAPNLEE+VKEHKD+SDSSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS
Subjt:  MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS

TYK16277.1 hypothetical protein E5676_scaffold21G00460 [Cucumis melo var. makuwa]3.48e-2692.86Show/hide
Query:  MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS
        MA NLEE+V EHKDESDSSKSDRHWKRP KKAKVSGDHPNGRGLSALEVPDVPPLS
Subjt:  MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS

TrEMBL top hitse value%identityAlignment
A0A5A7SQC9 PMD domain-containing protein8.5e-2298.21Show/hide
Query:  MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS
        MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHP+GRGLSALEVPDVPPLS
Subjt:  MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS

A0A5A7U8L3 PMD domain-containing protein1.9e-2196.43Show/hide
Query:  MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS
        MAPNLEEEVKEHKDES++SKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS
Subjt:  MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS

A0A5A7UJ48 PMD domain-containing protein2.5e-2196.43Show/hide
Query:  MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS
        MAPNLEEEVK+HKDESDSSKSDRHWKRPLKKAKVSGDHP+GRGLSALEVPDVPPLS
Subjt:  MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS

A0A5A7VAY8 Uncharacterized protein1.9e-2196.43Show/hide
Query:  MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS
        MAPNLEE+VKEHKD+SDSSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS
Subjt:  MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS

A0A5D3C4E5 PMD domain-containing protein2.5e-2196.43Show/hide
Query:  MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS
        MAPNLEEEVK+HKDESDSSKSDRHWKRPLKKAKVSGDHP+GRGLSALEVPDVPPLS
Subjt:  MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCTAATCTTGAGGAGGAGGTAAAGGAGCATAAAGATGAGAGCGATAGCAGCAAAAGTGATCGTCATTGGAAGAGACCTTTGAAGAAAGCGAAGGTATCAGGTGA
TCATCCCAACGGAAGGGGTTTAAGTGCTTTGGAAGTTCCTGATGTTCCACCACTGAGCCAGACAGTGATGAATCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCTAATCTTGAGGAGGAGGTAAAGGAGCATAAAGATGAGAGCGATAGCAGCAAAAGTGATCGTCATTGGAAGAGACCTTTGAAGAAAGCGAAGGTATCAGGTGA
TCATCCCAACGGAAGGGGTTTAAGTGCTTTGGAAGTTCCTGATGTTCCACCACTGAGCCAGACAGTGATGAATCTTTGA
Protein sequenceShow/hide protein sequence
MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPNGRGLSALEVPDVPPLSQTVMNL