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IVF0025116 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025116
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLPS-induced tumor necrosis factor alpha factor
Genome locationchr02:18689444..18689725
RNA-Seq ExpressionIVF0025116
SyntenyIVF0025116
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054811.1 hypothetical protein E6C27_scaffold437G00990 [Cucumis melo var. makuwa]6.33e-1375.44Show/hide
Query:  MADVSAALKMAADCAPAVATGASVVMTVAPMLTPVVAPVMVAANVVTSVTVVLRVLG
        M DVSA LKMA DCA AVA GASVVMTVAPMLTPVVAPVM +  V TSVT V+ +LG
Subjt:  MADVSAALKMAADCAPAVATGASVVMTVAPMLTPVVAPVMVAANVVTSVTVVLRVLG

KAA0068093.1 LPS-induced tumor necrosis factor alpha factor [Cucumis melo var. makuwa]1.28e-0880.43Show/hide
Query:  ADCAPAVATGASVVMTVAPMLTPVVAPVMVAANVVTSVTVVLRVLG
        ADCAP VATGASVVMTVAPMLTPVVAPVM AA V TS+T V+ +LG
Subjt:  ADCAPAVATGASVVMTVAPMLTPVVAPVMVAANVVTSVTVVLRVLG

KGN65426.1 hypothetical protein Csa_019847 [Cucumis sativus]4.78e-1860.22Show/hide
Query:  MAIYTKEPTT-YFSSPIKIYNTRKRRGELYIYIYTKMADVSAALKMAADCAPAVATGASVVMTVAPMLTPVVAPVMVAANVVTSVTVVLRVLG
        MAIYTK+P++ YFSSPIK                  M D   ALK+AADCAPAVAT ++VVMTVAP L PVVAPVMVAA VVTSVT VL++ G
Subjt:  MAIYTKEPTT-YFSSPIKIYNTRKRRGELYIYIYTKMADVSAALKMAADCAPAVATGASVVMTVAPMLTPVVAPVMVAANVVTSVTVVLRVLG

TYJ99647.1 hypothetical protein E5676_scaffold562G00240 [Cucumis melo var. makuwa]2.21e-1377.19Show/hide
Query:  MADVSAALKMAADCAPAVATGASVVMTVAPMLTPVVAPVMVAANVVTSVTVVLRVLG
        M DVSA LKMA DCA AVA GASVVMTVAPMLTPVVAPVM A  V TSVT V+ +LG
Subjt:  MADVSAALKMAADCAPAVATGASVVMTVAPMLTPVVAPVMVAANVVTSVTVVLRVLG

TYK09492.1 hypothetical protein E5676_scaffold499G00920 [Cucumis melo var. makuwa]4.01e-23100Show/hide
Query:  MADVSAALKMAADCAPAVATGASVVMTVAPMLTPVVAPVMVAANVVTSVTVVLRVLGM
        MADVSAALKMAADCAPAVATGASVVMTVAPMLTPVVAPVMVAANVVTSVTVVLRVLGM
Subjt:  MADVSAALKMAADCAPAVATGASVVMTVAPMLTPVVAPVMVAANVVTSVTVVLRVLGM

TrEMBL top hitse value%identityAlignment
A0A0A0LZP7 Uncharacterized protein8.3e-1359.57Show/hide
Query:  MAIYTKEPTT-YFSSPIKIYNTRKRRGELYIYIYTKMADVSAALKMAADCAPAVATGASVVMTVAPMLTPVVAPVMVAANVVTSVTVVLRVLGM
        MAIYTK+P++ YFSSPI                  KM D   ALK+AADCAPAVAT ++VVMTVAP L PVVAPVMVAA VVTSVT VL++ G+
Subjt:  MAIYTKEPTT-YFSSPIKIYNTRKRRGELYIYIYTKMADVSAALKMAADCAPAVATGASVVMTVAPMLTPVVAPVMVAANVVTSVTVVLRVLGM

A0A5A7UMM6 Uncharacterized protein1.2e-0875.44Show/hide
Query:  MADVSAALKMAADCAPAVATGASVVMTVAPMLTPVVAPVMVAANVVTSVTVVLRVLG
        M DVSA LKMA DCA AVA GASVVMTVAPMLTPVVAPVM +  V TSVT V+ +LG
Subjt:  MADVSAALKMAADCAPAVATGASVVMTVAPMLTPVVAPVMVAANVVTSVTVVLRVLG

A0A5D3BKI7 Uncharacterized protein5.6e-0977.19Show/hide
Query:  MADVSAALKMAADCAPAVATGASVVMTVAPMLTPVVAPVMVAANVVTSVTVVLRVLG
        M DVSA LKMA DCA AVA GASVVMTVAPMLTPVVAPVM A  V TSVT V+ +LG
Subjt:  MADVSAALKMAADCAPAVATGASVVMTVAPMLTPVVAPVMVAANVVTSVTVVLRVLG

A0A5D3CE01 Uncharacterized protein2.1e-16100Show/hide
Query:  MADVSAALKMAADCAPAVATGASVVMTVAPMLTPVVAPVMVAANVVTSVTVVLRVLGM
        MADVSAALKMAADCAPAVATGASVVMTVAPMLTPVVAPVMVAANVVTSVTVVLRVLGM
Subjt:  MADVSAALKMAADCAPAVATGASVVMTVAPMLTPVVAPVMVAANVVTSVTVVLRVLGM

A0A5D3DRF6 LPS-induced tumor necrosis factor alpha factor2.0e-0678.72Show/hide
Query:  ADCAPAVATGASVVMTVAPMLTPVVAPVMVAANVVTSVTVVLRVLGM
        ADCAP VATGASVVMTVAPMLTPVVAPVM AA V TS+T V+ +LG+
Subjt:  ADCAPAVATGASVVMTVAPMLTPVVAPVMVAANVVTSVTVVLRVLGM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATATATACGAAGGAACCTACTACTTATTTTTCATCGCCAATCAAAATATATAATACAAGAAAAAGAAGAGGAGAGCTATATATATACATATACACAAAAATGGC
CGATGTATCGGCTGCTTTGAAGATGGCAGCTGACTGTGCACCGGCAGTGGCAACTGGAGCATCGGTCGTGATGACAGTGGCACCAATGTTGACCCCCGTTGTTGCACCTG
TAATGGTCGCAGCCAATGTTGTTACATCCGTCACGGTCGTTTTGAGGGTTTTAGGAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTATATATACGAAGGAACCTACTACTTATTTTTCATCGCCAATCAAAATATATAATACAAGAAAAAGAAGAGGAGAGCTATATATATACATATACACAAAAATGGC
CGATGTATCGGCTGCTTTGAAGATGGCAGCTGACTGTGCACCGGCAGTGGCAACTGGAGCATCGGTCGTGATGACAGTGGCACCAATGTTGACCCCCGTTGTTGCACCTG
TAATGGTCGCAGCCAATGTTGTTACATCCGTCACGGTCGTTTTGAGGGTTTTAGGAATGTAA
Protein sequenceShow/hide protein sequence
MAIYTKEPTTYFSSPIKIYNTRKRRGELYIYIYTKMADVSAALKMAADCAPAVATGASVVMTVAPMLTPVVAPVMVAANVVTSVTVVLRVLGM