CuGenDBv2

Gene ID	IVF0025165
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	zinc finger protein JAGGED
Genome location	chr09:10336236..10336837
RNA-Seq Expression	IVF0025165
Synteny	IVF0025165
Gene Ontology terms	GO:0001522 - pseudouridine synthesis (biological process) GO:0007275 - multicellular organism development (biological process) GO:0003723 - RNA binding (molecular function) GO:0009982 - pseudouridine synthase activity (molecular function)
InterPro domains	IPR031113 - Zinc finger protein JAGGED-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0047421.1 zinc finger protein JAGGED [Cucumis melo var. makuwa]

6.18e-106

100

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Query:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS
        MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS
Subjt:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS

Query:  SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF
        SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF
Subjt:  SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF

KGN51212.2 hypothetical protein Csa_008797 [Cucumis sativus]

1.25e-103

97.42

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Query:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS
        MAPANYH+AGGSG+VGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS
Subjt:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS

Query:  SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF
        S VESSSYTCIGAPVGHAA GFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF
Subjt:  SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF

TYK04130.1 zinc finger protein JAGGED [Cucumis melo var. makuwa]

4.58e-106

100

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Query:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS
        MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS
Subjt:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS

Query:  SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF
        SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF
Subjt:  SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF

XP_008465782.1 PREDICTED: zinc finger protein JAGGED [Cucumis melo]

1.31e-106

100

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Query:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS
        MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS
Subjt:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS

Query:  SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF
        SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF
Subjt:  SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF

XP_011655169.1 zinc finger protein JAGGED [Cucumis sativus]

9.88e-104

97.42

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Query:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS
        MAPANYH+AGGSG+VGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS
Subjt:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS

Query:  SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF
        S VESSSYTCIGAPVGHAA GFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF
Subjt:  SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KTC2 C2H2-type domain-containing protein

2.2e-79

97.42

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Query:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS
        MAPANYH+AGGSG+VGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS
Subjt:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS

Query:  SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF
        S VESSSYTCIGAPVGHAA GFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF
Subjt:  SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF

A0A1S3CQ11 zinc finger protein JAGGED

1.4e-81

100

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Query:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS
        MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS
Subjt:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS

Query:  SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF
        SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF
Subjt:  SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF

A0A5A7U1F5 Zinc finger protein JAGGED

1.4e-81

100

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Query:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS
        MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS
Subjt:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS

Query:  SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF
        SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF
Subjt:  SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF

A0A5D3BYD4 Zinc finger protein JAGGED

1.4e-81

100

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Query:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS
        MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS
Subjt:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGS

Query:  SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF
        SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF
Subjt:  SPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF

A0A6J1I6U1 zinc finger protein JAGGED-like

1.6e-56

81.01

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Query:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLL-PQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYG
        MAP +YHTA GSG VGSD TL LRFPTRMF GSSP TLL P P PPP P  HQPYLY+SP+RPSSFPSYYPPPQASINDYYVGHVLGNP+QCSHQT+NYG
Subjt:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLL-PQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYG

Query:  --SSPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF
          SS +ESSSYTCIGAPVG AA  FGGR+ G  GGRDGS QQQRLDVPSSINRFQDGF
Subjt:  --SSPVESSSYTCIGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF

SwissProt top hits

e value

%identity

Alignment

Q6S591 Zinc finger protein JAGGED

8.6e-04

34.55

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Query:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVG--HVLGNPSQCSHQTVNY
        ++P  YH         S  + P+ +P     GSS   L+PQPP PP P  + PY  N  +  + F  YY      +N  + G   +  +P+  +  TV+Y
Subjt:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVG--HVLGNPSQCSHQTVNY

Query:  -GSSPVESSSYTCIGAPVGHAAAGFGGRDGG-------GSGGRDGSQQQQRLD--VPSSINRFQD
           SPVE   YTC+GAP+G    GF  R             GRDG   +QRLD  +   INRFQD
Subjt:  -GSSPVESSSYTCIGAPVGHAAAGFGGRDGG-------GSGGRDGSQQQQRLD--VPSSINRFQD

Arabidopsis top hits

e value

%identity

Alignment

AT1G68480.1 C2H2 and C2HC zinc fingers superfamily protein

6.1e-05

34.55

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Query:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVG--HVLGNPSQCSHQTVNY
        ++P  YH         S  + P+ +P     GSS   L+PQPP PP P  + PY  N  +  + F  YY      +N  + G   +  +P+  +  TV+Y
Subjt:  MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVG--HVLGNPSQCSHQTVNY

Query:  -GSSPVESSSYTCIGAPVGHAAAGFGGRDGG-------GSGGRDGSQQQQRLD--VPSSINRFQD
           SPVE   YTC+GAP+G    GF  R             GRDG   +QRLD  +   INRFQD
Subjt:  -GSSPVESSSYTCIGAPVGHAAAGFGGRDGG-------GSGGRDGSQQQQRLD--VPSSINRFQD

Sequences

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CDS sequence

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ATGGCACCGGCAAACTACCACACTGCCGGCGGCAGTGGAAGCGTAGGAAGTGATTCAACGCTGCCTCTTAGATTCCCAACGAGAATGTTCTCTGGGTCGTCTCCAGGCAC
GCTTCTGCCACAGCCGCCCCCACCACCGCTACCTTCATCGCATCAGCCGTATCTATACAACTCACCGACGCGGCCGTCTAGTTTCCCTTCCTACTATCCTCCTCCACAAG
CCTCGATCAACGACTACTACGTGGGACATGTCTTGGGGAACCCTTCTCAATGCAGCCATCAGACAGTGAACTACGGTTCTAGCCCGGTGGAGTCGAGTAGCTACACTTGC
ATCGGAGCTCCGGTAGGACATGCTGCAGCAGGGTTCGGTGGACGAGATGGTGGTGGGAGTGGCGGTAGAGATGGATCACAGCAGCAGCAGCGCTTGGACGTTCCTTCTTC
GATCAATCGGTTTCAAGATGGATTCTAA

mRNA sequence

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Protein sequence

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MAPANYHTAGGSGSVGSDSTLPLRFPTRMFSGSSPGTLLPQPPPPPLPSSHQPYLYNSPTRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGSSPVESSSYTC
IGAPVGHAAAGFGGRDGGGSGGRDGSQQQQRLDVPSSINRFQDGF

IVF0025165 (gene) of Melon (IVF77) v1 genome