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IVF0025170 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025170
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr05:5518095..5518319
RNA-Seq ExpressionIVF0025170
SyntenyIVF0025170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054019.1 retrotransposon protein [Cucumis melo var. makuwa]2.06e-2359.72Show/hide
Query:  KCLMNKPFPYYDKLSYLFGKDRAMGGRMETFVDVGSNDASGYKRFPPKDGINMDIPTMYNQEFNMSPEDIRA
        K L+NK FPYYD+L+Y+F KDRA G  +ETF D+GSND S Y+ F P DG +M+IPT+Y+Q FNMS ED++ 
Subjt:  KCLMNKPFPYYDKLSYLFGKDRAMGGRMETFVDVGSNDASGYKRFPPKDGINMDIPTMYNQEFNMSPEDIRA

KAA0065645.1 retrotransposon protein [Cucumis melo var. makuwa]4.04e-36100Show/hide
Query:  MKCLMNKPFPYYDKLSYLFGKDRAMGGRMETFVDVGSNDASGYKRFPPKDGINMDIPTM
        MKCLMNKPFPYYDKLSYLFGKDRAMGGRMETFVDVGSNDASGYKRFPPKDGINMDIPTM
Subjt:  MKCLMNKPFPYYDKLSYLFGKDRAMGGRMETFVDVGSNDASGYKRFPPKDGINMDIPTM

XP_008444620.1 PREDICTED: uncharacterized protein LOC103487886 [Cucumis melo]4.77e-2561.64Show/hide
Query:  KCLMNKPFPYYDKLSYLFGKDRAMGGRMETFVDVGSNDASGYKRFPPKDGINMDIPTMYNQEFNMSPEDIRAP
        K L+NK FPYYD+L+Y+F KDRA G  +ETF D+GSND S Y+ F P DG +M+IPT+Y+Q FNMS ED+ AP
Subjt:  KCLMNKPFPYYDKLSYLFGKDRAMGGRMETFVDVGSNDASGYKRFPPKDGINMDIPTMYNQEFNMSPEDIRAP

XP_031742657.1 uncharacterized protein LOC116404426 [Cucumis sativus]2.72e-2360.27Show/hide
Query:  KCLMNKPFPYYDKLSYLFGKDRAMGGRMETFVDVGSNDASGYKRFPPKDGINMDIPTMYNQEFNMSPEDIRAP
        K L+NKPFPYYDK +Y+FGKDRAMG  +ETF DVGSN   G++ FPP D  +M+IP+M +  FNMS +DI  P
Subjt:  KCLMNKPFPYYDKLSYLFGKDRAMGGRMETFVDVGSNDASGYKRFPPKDGINMDIPTMYNQEFNMSPEDIRAP

XP_031743896.1 uncharacterized protein LOC116404722 [Cucumis sativus]1.12e-2158.9Show/hide
Query:  KCLMNKPFPYYDKLSYLFGKDRAMGGRMETFVDVGSNDASGYKRFPPKDGINMDIPTMYNQEFNMSPEDIRAP
        K L+NKPFPYYDKL+Y+FGKDRA G   ETF DVGSN   G++ FP  D  +M IP+M++  FNMS +DI  P
Subjt:  KCLMNKPFPYYDKLSYLFGKDRAMGGRMETFVDVGSNDASGYKRFPPKDGINMDIPTMYNQEFNMSPEDIRAP

TrEMBL top hitse value%identityAlignment
A0A1S3BAQ2 uncharacterized protein LOC1034878862.3e-1861.64Show/hide
Query:  KCLMNKPFPYYDKLSYLFGKDRAMGGRMETFVDVGSNDASGYKRFPPKDGINMDIPTMYNQEFNMSPEDIRAP
        K L+NK FPYYD+L+Y+F KDRA G  +ETF D+GSND S Y+ F P DG +M+IPT+Y+Q FNMS ED+ AP
Subjt:  KCLMNKPFPYYDKLSYLFGKDRAMGGRMETFVDVGSNDASGYKRFPPKDGINMDIPTMYNQEFNMSPEDIRAP

A0A5A7VIP8 Retrotransposon protein2.1e-27100Show/hide
Query:  MKCLMNKPFPYYDKLSYLFGKDRAMGGRMETFVDVGSNDASGYKRFPPKDGINMDIPTM
        MKCLMNKPFPYYDKLSYLFGKDRAMGGRMETFVDVGSNDASGYKRFPPKDGINMDIPTM
Subjt:  MKCLMNKPFPYYDKLSYLFGKDRAMGGRMETFVDVGSNDASGYKRFPPKDGINMDIPTM

A0A5D3BZU9 Retrotransposon protein8.3e-1658.33Show/hide
Query:  KCLMNKPFPYYDKLSYLFGKDRAMGGRMETFVDVGSNDASGYKRFPPKDGINMDIPTMYNQEFNMSPEDIRA
        K L+NK F YYDKL+Y+F +DRA    +ETF D+GSND SGYK F   D  +++IPT+YNQ FNMS +D+RA
Subjt:  KCLMNKPFPYYDKLSYLFGKDRAMGGRMETFVDVGSNDASGYKRFPPKDGINMDIPTMYNQEFNMSPEDIRA

A0A5D3DB07 Retrotransposon protein1.5e-1760.56Show/hide
Query:  KCLMNKPFPYYDKLSYLFGKDRAMGGRMETFVDVGSNDASGYKRFPPKDGINMDIPTMYNQEFNMSPEDIR
        K L+NK FPYYD+L+Y+F KDRA G  +ETF D+GSND S Y+ F P DG +M+IPT+Y+Q FNMS ED++
Subjt:  KCLMNKPFPYYDKLSYLFGKDRAMGGRMETFVDVGSNDASGYKRFPPKDGINMDIPTMYNQEFNMSPEDIR

A0A5D3DS68 Retrotransposon protein1.9e-1555.56Show/hide
Query:  KCLMNKPFPYYDKLSYLFGKDRAMGGRMETFVDVGSNDASGYKRFPPKDGINMDIPTMYNQEFNMSPEDIRA
        K L+NK F YYD+L+Y+FG+DR MG  +ETF+DVGSND S Y+ F   DG + + P+MY+Q F+MS +D+RA
Subjt:  KCLMNKPFPYYDKLSYLFGKDRAMGGRMETFVDVGSNDASGYKRFPPKDGINMDIPTMYNQEFNMSPEDIRA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATGCCTCATGAACAAGCCTTTCCCCTATTACGACAAACTTTCGTATTTGTTCGGGAAAGATCGTGCAATGGGAGGACGTATGGAAACATTCGTCGATGTTGGGTC
AAACGATGCTAGCGGGTACAAGAGATTTCCACCTAAAGATGGAATCAATATGGACATCCCTACTATGTACAACCAGGAATTTAACATGTCGCCTGAGGACATACGGGCCC
CATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATGCCTCATGAACAAGCCTTTCCCCTATTACGACAAACTTTCGTATTTGTTCGGGAAAGATCGTGCAATGGGAGGACGTATGGAAACATTCGTCGATGTTGGGTC
AAACGATGCTAGCGGGTACAAGAGATTTCCACCTAAAGATGGAATCAATATGGACATCCCTACTATGTACAACCAGGAATTTAACATGTCGCCTGAGGACATACGGGCCC
CATGA
Protein sequenceShow/hide protein sequence
MKCLMNKPFPYYDKLSYLFGKDRAMGGRMETFVDVGSNDASGYKRFPPKDGINMDIPTMYNQEFNMSPEDIRAP