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IVF0025184 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025184
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNBS-LRR type resistance protein
Genome locationchr01:25187074..25187277
RNA-Seq ExpressionIVF0025184
SyntenyIVF0025184
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031930.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]1.86e-0466.67Show/hide
Query:  CP--HVEAGMVTADAAPPRQRRPIAGRARGTQKKDGRGRLSL
        CP  +V+A   T DAA  RQRRP+A RARGTQKKDGR RL L
Subjt:  CP--HVEAGMVTADAAPPRQRRPIAGRARGTQKKDGRGRLSL

KAA0066232.1 transposase [Cucumis melo var. makuwa]3.36e-1085.29Show/hide
Query:  MACPHVEAGMVTADAAPPRQRRPIAGRARGTQKK
        MACP+V+AGM TADAAPPRQRRP+AGRARGT+KK
Subjt:  MACPHVEAGMVTADAAPPRQRRPIAGRARGTQKK

KAA0067956.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]1.07e-1075Show/hide
Query:  MACP--HVEAGMVTADAAPPRQRRPIAGRARGTQKKDGRGRLSL
        MACP  +V+A   TADA PPRQ+RP+AGRARGTQKK+GRGRLSL
Subjt:  MACP--HVEAGMVTADAAPPRQRRPIAGRARGTQKKDGRGRLSL

TYK17960.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.23e-0568.42Show/hide
Query:  HVEAGMVTADAAPPRQRRPIAGRARGTQKKDGRGRLSL
        +V+A   T D   PRQRRP+AGRARGTQKKDGR RL L
Subjt:  HVEAGMVTADAAPPRQRRPIAGRARGTQKKDGRGRLSL

TrEMBL top hitse value%identityAlignment
A0A5A7VD11 Transposase3.8e-0785.29Show/hide
Query:  MACPHVEAGMVTADAAPPRQRRPIAGRARGTQKK
        MACP+V+AGM TADAAPPRQRRP+AGRARGT+KK
Subjt:  MACPHVEAGMVTADAAPPRQRRPIAGRARGTQKK

A0A5A7VN13 NBS-LRR type resistance protein1.3e-0775Show/hide
Query:  MACP--HVEAGMVTADAAPPRQRRPIAGRARGTQKKDGRGRLSL
        MACP  +V+A   TADA PPRQ+RP+AGRARGTQKK+GRGRLSL
Subjt:  MACP--HVEAGMVTADAAPPRQRRPIAGRARGTQKKDGRGRLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGCCCTCACGTCGAAGCTGGTATGGTGACAGCCGACGCCGCACCACCGAGGCAGAGACGGCCGATAGCTGGCCGTGCACGCGGAACCCAGAAGAAGGACGGTCG
TGGACGGCTGTCGCTGTGGCTTCCCGTCGGTGAGGTGCGGATGGAGAGAAACGGCGGTCGTCGAAGGCGCACGGACGGAAGGAGAAAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGCCCTCACGTCGAAGCTGGTATGGTGACAGCCGACGCCGCACCACCGAGGCAGAGACGGCCGATAGCTGGCCGTGCACGCGGAACCCAGAAGAAGGACGGTCG
TGGACGGCTGTCGCTGTGGCTTCCCGTCGGTGAGGTGCGGATGGAGAGAAACGGCGGTCGTCGAAGGCGCACGGACGGAAGGAGAAAAGAATGA
Protein sequenceShow/hide protein sequence
MACPHVEAGMVTADAAPPRQRRPIAGRARGTQKKDGRGRLSLWLPVGEVRMERNGGRRRRTDGRRKE