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IVF0025243 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025243
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr12:6217990..6218301
RNA-Seq ExpressionIVF0025243
SyntenyIVF0025243
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051780.1 uncharacterized protein E6C27_scaffold60G001840 [Cucumis melo var. makuwa]1.13e-68100Show/hide
Query:  MKAHPLKKFFPTLGHPPTTYKEAGQSECSPSVRFSIQVDPLVDDQHSVPDSDFIGESIENLGGNFADPANQNPVNVNAHVEPTDTCAPKNVKLEVNVESQ
        MKAHPLKKFFPTLGHPPTTYKEAGQSECSPSVRFSIQVDPLVDDQHSVPDSDFIGESIENLGGNFADPANQNPVNVNAHVEPTDTCAPKNVKLEVNVESQ
Subjt:  MKAHPLKKFFPTLGHPPTTYKEAGQSECSPSVRFSIQVDPLVDDQHSVPDSDFIGESIENLGGNFADPANQNPVNVNAHVEPTDTCAPKNVKLEVNVESQ

Query:  PET
        PET
Subjt:  PET

KAA0059910.1 envelope-like protein [Cucumis melo var. makuwa]5.33e-3177.22Show/hide
Query:  FFPTLGHPPTTYKEAGQSECSPSVRFSIQVDPLVDDQHSVPDSDFIGESIENLGGNFADPANQNPVNVNAHVEPTDTCA
        F PT GHPPTT  E GQS CSP VR SI+VDPLVDDQHSVPD D +GESIENLGGNF D ANQNPV+V+AH+EPTDT A
Subjt:  FFPTLGHPPTTYKEAGQSECSPSVRFSIQVDPLVDDQHSVPDSDFIGESIENLGGNFADPANQNPVNVNAHVEPTDTCA

KAA0067162.1 uncharacterized protein E6C27_scaffold38G002370 [Cucumis melo var. makuwa]1.54e-3266.29Show/hide
Query:  FFPTLGHPPTTYKEAGQSECSPSVRFSIQVDPLVDDQHSVPDSDFIGESIENLGGNFADPANQNPVNVNAHVEPTDTCAPKNVKLEVNV
        F PT  HPPTT  E GQ  CSP +R SI VDP VDDQHS+P+SD +GES ENLGGNF D ANQNP NV+AHV+PT+TC P NV+ ++NV
Subjt:  FFPTLGHPPTTYKEAGQSECSPSVRFSIQVDPLVDDQHSVPDSDFIGESIENLGGNFADPANQNPVNVNAHVEPTDTCAPKNVKLEVNV

TYJ98315.1 uncharacterized protein E5676_scaffold232G00330 [Cucumis melo var. makuwa]7.74e-3172.41Show/hide
Query:  PTLGHPPTTYKEAGQSECSPSVRFSIQVDPLVDDQHSVPDSDFIGESIENLGGNFADPANQNPVNVNAHVEPTDTCAPKNVKLEVNV
        PTLG PP   KEA QS  SP VR  I VDPLVDDQHSVPDSD +GESIENLGGNFA  ANQNP +V+ HV+PTDTCAP NV+ +VNV
Subjt:  PTLGHPPTTYKEAGQSECSPSVRFSIQVDPLVDDQHSVPDSDFIGESIENLGGNFADPANQNPVNVNAHVEPTDTCAPKNVKLEVNV

TYK24860.1 uncharacterized protein E5676_scaffold184G001290 [Cucumis melo var. makuwa]2.26e-3077.22Show/hide
Query:  FFPTLGHPPTTYKEAGQSECSPSVRFSIQVDPLVDDQHSVPDSDFIGESIENLGGNFADPANQNPVNVNAHVEPTDTCA
        F PT GHPPTT  E GQS CSP VR SI+VDPLVDDQHSVPD D +GESIENLGGNF D ANQNPV+V+AH+EPTDT A
Subjt:  FFPTLGHPPTTYKEAGQSECSPSVRFSIQVDPLVDDQHSVPDSDFIGESIENLGGNFADPANQNPVNVNAHVEPTDTCA

TrEMBL top hitse value%identityAlignment
A0A5A7UXN3 Envelope-like protein1.6e-2577.22Show/hide
Query:  FFPTLGHPPTTYKEAGQSECSPSVRFSIQVDPLVDDQHSVPDSDFIGESIENLGGNFADPANQNPVNVNAHVEPTDTCA
        F PT GHPPTT  E GQS CSP VR SI+VDPLVDDQHSVPD D +GESIENLGGNF D ANQNPV+V+AH+EPTDT A
Subjt:  FFPTLGHPPTTYKEAGQSECSPSVRFSIQVDPLVDDQHSVPDSDFIGESIENLGGNFADPANQNPVNVNAHVEPTDTCA

A0A5D3BU81 Uncharacterized protein2.1e-2566.32Show/hide
Query:  KKFFPTLGHPPTTYKEAGQSECSPSVRFSIQVDPLVDDQHSVPDSDFIGESIENLGGNFADPANQNPVNVNAHVEPTDTCAPKNVKLEVNVESQP
        + F PT GHPPTT  E GQS  SP VR SI+VDPLVDDQHSVPD D IGESIENLG NF DPANQN  +V+AH+E TDTCAP NV+ +   +  P
Subjt:  KKFFPTLGHPPTTYKEAGQSECSPSVRFSIQVDPLVDDQHSVPDSDFIGESIENLGGNFADPANQNPVNVNAHVEPTDTCAPKNVKLEVNVESQP

A0A5D3DCS1 Uncharacterized protein2.0e-52100Show/hide
Query:  MKAHPLKKFFPTLGHPPTTYKEAGQSECSPSVRFSIQVDPLVDDQHSVPDSDFIGESIENLGGNFADPANQNPVNVNAHVEPTDTCAPKNVKLEVNVESQ
        MKAHPLKKFFPTLGHPPTTYKEAGQSECSPSVRFSIQVDPLVDDQHSVPDSDFIGESIENLGGNFADPANQNPVNVNAHVEPTDTCAPKNVKLEVNVESQ
Subjt:  MKAHPLKKFFPTLGHPPTTYKEAGQSECSPSVRFSIQVDPLVDDQHSVPDSDFIGESIENLGGNFADPANQNPVNVNAHVEPTDTCAPKNVKLEVNVESQ

Query:  PET
        PET
Subjt:  PET

A0A5D3DNK5 Uncharacterized protein1.6e-2577.22Show/hide
Query:  FFPTLGHPPTTYKEAGQSECSPSVRFSIQVDPLVDDQHSVPDSDFIGESIENLGGNFADPANQNPVNVNAHVEPTDTCA
        F PT GHPPTT  E GQS CSP VR SI+VDPLVDDQHSVPD D +GESIENLGGNF D ANQNPV+V+AH+EPTDT A
Subjt:  FFPTLGHPPTTYKEAGQSECSPSVRFSIQVDPLVDDQHSVPDSDFIGESIENLGGNFADPANQNPVNVNAHVEPTDTCA

A0A5D3DR40 Uncharacterized protein2.1e-2566.29Show/hide
Query:  FFPTLGHPPTTYKEAGQSECSPSVRFSIQVDPLVDDQHSVPDSDFIGESIENLGGNFADPANQNPVNVNAHVEPTDTCAPKNVKLEVNV
        F PT  HPPTT  E GQ  CSP +R SI VDP VDDQHS+P+SD +GES ENLGGNF D ANQNP NV+AHV+PT+TC P NV+ ++NV
Subjt:  FFPTLGHPPTTYKEAGQSECSPSVRFSIQVDPLVDDQHSVPDSDFIGESIENLGGNFADPANQNPVNVNAHVEPTDTCAPKNVKLEVNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCTCATCCGCTGAAGAAATTTTTTCCAACGCTTGGTCATCCTCCTACGACATATAAAGAAGCTGGTCAATCTGAGTGCTCTCCATCAGTTAGGTTTTCGATTCA
GGTCGATCCTTTAGTTGATGATCAGCATTCAGTTCCTGACTCAGATTTTATTGGTGAATCTATTGAGAATCTGGGTGGAAATTTTGCGGATCCTGCAAATCAGAACCCTG
TTAATGTTAATGCACATGTTGAACCTACTGATACTTGTGCACCCAAAAATGTAAAACTAGAAGTAAATGTTGAATCTCAACCAGAGACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCTCATCCGCTGAAGAAATTTTTTCCAACGCTTGGTCATCCTCCTACGACATATAAAGAAGCTGGTCAATCTGAGTGCTCTCCATCAGTTAGGTTTTCGATTCA
GGTCGATCCTTTAGTTGATGATCAGCATTCAGTTCCTGACTCAGATTTTATTGGTGAATCTATTGAGAATCTGGGTGGAAATTTTGCGGATCCTGCAAATCAGAACCCTG
TTAATGTTAATGCACATGTTGAACCTACTGATACTTGTGCACCCAAAAATGTAAAACTAGAAGTAAATGTTGAATCTCAACCAGAGACTTAA
Protein sequenceShow/hide protein sequence
MKAHPLKKFFPTLGHPPTTYKEAGQSECSPSVRFSIQVDPLVDDQHSVPDSDFIGESIENLGGNFADPANQNPVNVNAHVEPTDTCAPKNVKLEVNVESQPET