CuGenDBv2

Gene ID	IVF0025267
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Lipoxygenase
Genome location	chr05:704149..706189
RNA-Seq Expression	IVF0025267
Synteny	IVF0025267
Gene Ontology terms	GO:0006633 - fatty acid biosynthetic process (biological process) GO:0031408 - oxylipin biosynthetic process (biological process) GO:0005737 - cytoplasm (cellular component) GO:0005515 - protein binding (molecular function) GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000907 - Lipoxygenase IPR036392 - PLAT/LH2 domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0041368.1 linoleate 13S-lipoxygenase 2-1 [Cucumis melo var. makuwa]

5.90e-124

99.49

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Query:  MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNLGGS
        MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVE+KENSTERFIDTIFIKNLGGS
Subjt:  MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNLGGS

Query:  TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK
        TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK
Subjt:  TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK

KAA0041370.1 linoleate 13S-lipoxygenase 2-1 [Cucumis melo var. makuwa]

1.96e-113

92.93

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Query:  MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNLGGS
        MGVSKIA+VDVIPKINE+FPSDDTLFLKFASSDLDSDGKEKALIEGVA IHKKSDQKYNYVAKIEVPEGFGEIGAVIVE+KENSTERFIDTI IKNLGGS
Subjt:  MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNLGGS

Query:  TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK
        TIEPGETDGL GMIRRIYTYLVVLFAI+R V ESV RCIKSLFR PP QQGSTTTGALGSPLNANCSTS+TPVTFSC+SWIQPKNLIPDQRRIFFSTK
Subjt:  TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK

TYK21649.1 linoleate 13S-lipoxygenase 2-1 [Cucumis melo var. makuwa]

2.11e-124

100

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Query:  MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNLGGS
        MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNLGGS
Subjt:  MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNLGGS

Query:  TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK
        TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK
Subjt:  TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK

XP_016900736.1 PREDICTED: lipoxygenase 7, chloroplastic-like, partial [Cucumis melo]

2.58e-119

92.93

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Query:  MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNLGGS
        MGVSKIA+VDVIPKINE+FPSDDTLFLKFASSDLDSDGKEKALIEGVA IHKKSDQKYNYVAKIEVPEGFGEIGAVIVE+KENSTERFIDTI IKNLGGS
Subjt:  MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNLGGS

Query:  TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK
        TIEPGETDGL GMIRRIYTYLVVLFAI+R V ESV RCIKSLFR PP QQGSTTTGALGSPLNANCSTS+TPVTFSC+SWIQPKNLIPDQRRIFFSTK
Subjt:  TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK

XP_016900737.1 PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis melo]

4.51e-126

99.49

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Query:  MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNLGGS
        MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVE+KENSTERFIDTIFIKNLGGS
Subjt:  MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNLGGS

Query:  TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK
        TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK
Subjt:  TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KZ84 Uncharacterized protein

2.2e-96

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Query:  MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNLGGS
        MGV KI SVDVIPKINE+FPSDDTLFLKFASSDLDSDG+EKALIEGVAKIHKKSDQKYNY AKIEVPEGFGEIGAVIVE+KE STERFIDTIF+ NLGGS
Subjt:  MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNLGGS

Query:  TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTKIQ
        TI  GETDGL G+IRRIYTYLVVLF+IIRLV +SV RC K  FRAPP QQ STT G LGSPL+ANCSTS+  VTFSCNSW+QPKNLIPDQRRIFFSTKIQ
Subjt:  TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTKIQ

Query:  VQKKELRETFTFQETKHSQR
        VQ +ELRE F FQETKHSQR
Subjt:  VQKKELRETFTFQETKHSQR

A0A1S4DXN4 linoleate 13S-lipoxygenase 2-1, chloroplastic-like

1.8e-103

99.49

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Query:  MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNLGGS
        MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVE+KENSTERFIDTIFIKNLGGS
Subjt:  MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNLGGS

Query:  TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK
        TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK
Subjt:  TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK

A0A5A7TDJ5 Lipoxygenase

3.2e-95

92.93

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Query:  MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNLGGS
        MGVSKIA+VDVIPKINE+FPSDDTLFLKFASSDLDSDGKEKALIEGVA IHKKSDQKYNYVAKIEVPEGFGEIGAVIVE+KENSTERFIDTI IKNLGGS
Subjt:  MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNLGGS

Query:  TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK
        TIEPGETDGL GMIRRIYTYLVVLFAI+R V ESV RCIKSLFR PP QQGSTTTGALGSPLNANCSTS+TPVTFSC+SWIQPKNLIPDQRRIFFSTK
Subjt:  TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK

A0A5A7TEK5 Lipoxygenase

1.8e-103

99.49

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Query:  MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNLGGS
        MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVE+KENSTERFIDTIFIKNLGGS
Subjt:  MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNLGGS

Query:  TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK
        TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK
Subjt:  TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK

A0A5D3DE91 Lipoxygenase

8.3e-104

100

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Query:  MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNLGGS
        MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNLGGS
Subjt:  MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNLGGS

Query:  TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK
        TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK
Subjt:  TIEPGETDGLSGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTK

SwissProt top hits

e value

%identity

Alignment

Q84YK8 Probable lipoxygenase 8, chloroplastic

7.2e-04

37.5

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Query:  TLFLKFASSDLDS-DGKEKALIEGVAKIHKKSDQKY---NYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFI---KNLGGSTIEP
        +LFL+  SS+L++  GK+KA +   A  HK  D  +    Y A  +VP GFG IGAV+V   E   E F++ + +      G ST+ P
Subjt:  TLFLKFASSDLDS-DGKEKALIEGVAKIHKKSDQKY---NYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFI---KNLGGSTIEP

R9WS04 Lipoxygenase 2, chloroplastic

1.3e-05

40.79

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Query:  TLFLKFASSDLDSDGKEKALIEGVAKIHK--KSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNL
        +  L+  SSDLDS GKEK  ++  A   +  K  + Y Y  + EVP+ FGEIGAV+V+      ER  D  ++KN+
Subjt:  TLFLKFASSDLDSDGKEKALIEGVAKIHK--KSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNL

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGGGGTTAGCAAAATTGCAAGTGTTGATGTGATACCCAAGATCAATGAACAGTTTCCTTCCGATGATACCCTCTTTCTTAAGTTTGCTAGCTCCGATTTGGATAGCGA
TGGGAAAGAAAAGGCATTGATCGAAGGTGTGGCAAAAATACATAAGAAATCAGATCAGAAGTACAACTACGTCGCCAAAATTGAAGTTCCAGAAGGTTTTGGAGAGATTG
GAGCTGTGATTGTCGAAGTGAAAGAAAACTCGACTGAGAGATTCATCGATACTATTTTTATTAAGAATCTGGGCGGATCCACGATTGAGCCAGGAGAGACGGATGGCCTG
TCTGGAATGATTAGGCGTATATATACATATTTAGTTGTTCTGTTTGCTATAATAAGACTTGTTCTTGAATCAGTGACGAGGTGCATAAAATCGTTGTTTCGTGCCCCCCC
AGTACAGCAGGGTTCAACGACAACAGGAGCTTTGGGTTCGCCACTGAATGCAAACTGCTCAACATCTGAAACCCCAGTTACGTTCAGCTGTAATTCATGGATCCAACCCA
AAAATCTTATTCCTGACCAACGAAGGATCTTCTTTTCCACTAAGATCCAAGTTCAGAAAAAAGAGTTGAGGGAGACTTTTACGTTCCAAGAGACGAAGCATTCTCAGAGG
TGA

mRNA sequence

Show/hide mRNA sequence

GAAATATTCCAAGTTCCAAAAGATGGGGGTTAGCAAAATTGCAAGTGTTGATGTGATACCCAAGATCAATGAACAGTTTCCTTCCGATGATACCCTCTTTCTTAAGTTTG
CTAGCTCCGATTTGGATAGCGATGGGAAAGAAAAGGCATTGATCGAAGGTGTGGCAAAAATACATAAGAAATCAGATCAGAAGTACAACTACGTCGCCAAAATTGAAGTT
CCAGAAGGTTTTGGAGAGATTGGAGCTGTGATTGTCGAAGTGAAAGAAAACTCGACTGAGAGATTCATCGATACTATTTTTATTAAGAATCTGGGCGGATCCACGATTGA
GCCAGGAGAGACGGATGGCCTGTCTGGAATGATTAGGCGTATATATACATATTTAGTTGTTCTGTTTGCTATAATAAGACTTGTTCTTGAATCAGTGACGAGGTGCATAA
AATCGTTGTTTCGTGCCCCCCCAGTACAGCAGGGTTCAACGACAACAGGAGCTTTGGGTTCGCCACTGAATGCAAACTGCTCAACATCTGAAACCCCAGTTACGTTCAGC
TGTAATTCATGGATCCAACCCAAAAATCTTATTCCTGACCAACGAAGGATCTTCTTTTCCACTAAGATCCAAGTTCAGAAAAAAGAGTTGAGGGAGACTTTTACGTTCCA
AGAGACGAAGCATTCTCAGAGGTGA

Protein sequence

Show/hide protein sequence

MGVSKIASVDVIPKINEQFPSDDTLFLKFASSDLDSDGKEKALIEGVAKIHKKSDQKYNYVAKIEVPEGFGEIGAVIVEVKENSTERFIDTIFIKNLGGSTIEPGETDGL
SGMIRRIYTYLVVLFAIIRLVLESVTRCIKSLFRAPPVQQGSTTTGALGSPLNANCSTSETPVTFSCNSWIQPKNLIPDQRRIFFSTKIQVQKKELRETFTFQETKHSQR

IVF0025267 (gene) of Melon (IVF77) v1 genome