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IVF0025277 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025277
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr02:16568224..16569015
RNA-Seq ExpressionIVF0025277
SyntenyIVF0025277
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040417.1 uncharacterized protein E6C27_scaffold35G00400 [Cucumis melo var. makuwa]6.77e-6559.8Show/hide
Query:  MRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLVSLSSIQTSSLADIQLSVPDPNPVGQSTV
        MRGH FKSTPSRRPY L  EKNQV L DSS++S+HDE + G   +N++SE VVS+S+MSEMDS+ERD+VPL     +    + D+Q SVPDP+ V QS+ 
Subjt:  MRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLVSLSSIQTSSLADIQLSVPDPNPVGQSTV

Query:  NVDENVANNDGENLDEDVGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKIGRKKIPPNIPFAPIDGISFHLEESVQRWKY
        NV        GEN+ E+VGKHVEP +N AP  VEPN + P T+ EQP AD KSK  K Q+ R  +TTK GRKKI PNIP  PIDGISF L+ESVQRWKY
Subjt:  NVDENVANNDGENLDEDVGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKIGRKKIPPNIPFAPIDGISFHLEESVQRWKY

KAA0046513.1 uncharacterized protein E6C27_scaffold114G00110 [Cucumis melo var. makuwa]4.10e-13087.07Show/hide
Query:  MHGVRMRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLVSL---------------------
        MHGVRMRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLVSL                     
Subjt:  MHGVRMRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLVSL---------------------

Query:  -----SSIQTSSLADIQLSVPDPNPVGQSTVNVDENVANNDGENLDEDVGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKI
             SSIQTSSLADIQLSVPDPNPVGQSTVNVDENVANNDGENLDEDVGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKI
Subjt:  -----SSIQTSSLADIQLSVPDPNPVGQSTVNVDENVANNDGENLDEDVGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKI

Query:  GRKKIPPNIPFAPIDGISFHLEESVQRWKYIV
        GRKKIPPNIPFAPIDGISFHLEESVQRW   +
Subjt:  GRKKIPPNIPFAPIDGISFHLEESVQRWKYIV

KAA0046929.1 envelope-like protein [Cucumis melo var. makuwa]1.47e-6457.14Show/hide
Query:  MHGVRMRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLV-----SLSSIQTSSLADIQLS--
        MHGVR+R   F+STP+RRPYC   EKNQVN FD  NLS+HD+   GI  ENV++ESVV +SHMS+MDS+ERDDVPL       L S   S++AD  ++  
Subjt:  MHGVRMRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLV-----SLSSIQTSSLADIQLS--

Query:  ----------VPDPNPVGQSTVNV--------DENVANNDGENLDEDVGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKIG
                  +  P PVGQST NV        D N+A+N  EN +E+V  HVEP DN AP DVEPNVNAPQT+ EQP  + + KGKK QQ+R NITTK G
Subjt:  ----------VPDPNPVGQSTVNV--------DENVANNDGENLDEDVGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKIG

Query:  RKKIPPNIPFAPIDGISFHLEESV
        RKKIP NIP   IDGISFHLEESV
Subjt:  RKKIPPNIPFAPIDGISFHLEESV

TYJ98698.1 uncharacterized protein E5676_scaffold429G00370 [Cucumis melo var. makuwa]3.40e-5557.07Show/hide
Query:  SFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLVSLSSIQTSSLADIQLSVPDPNPVGQSTVNVDENVANNDGENLDED
        S  KNQV L DSS++S+HDE + G   +N++SE VVS+S+MSEMDS+ERD+VPL  LS   +    D+Q SVPDP+ V QS+ NV        GEN+ E+
Subjt:  SFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLVSLSSIQTSSLADIQLSVPDPNPVGQSTVNVDENVANNDGENLDED

Query:  VGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKIGRKKIPPNIPFAPIDGISFHLEESVQRWKYIV
        VGKHVEP +N AP  VEPN + P T+ EQP AD KSK  K Q+ R  +TTK GRKKI PNIP  PIDGISF L+ESVQRW + V
Subjt:  VGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKIGRKKIPPNIPFAPIDGISFHLEESVQRWKYIV

XP_008462765.1 PREDICTED: uncharacterized protein LOC103501050 [Cucumis melo]1.15e-12588Show/hide
Query:  MHGVRMRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLVSL---------------------
        MHGVRMRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLVSL                     
Subjt:  MHGVRMRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLVSL---------------------

Query:  -----SSIQTSSLADIQLSVPDPNPVGQSTVNVDENVANNDGENLDEDVGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKI
             SSIQTSSLADIQLSVPDPNPVGQSTVNVDENVANNDGENLDEDVGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKI
Subjt:  -----SSIQTSSLADIQLSVPDPNPVGQSTVNVDENVANNDGENLDEDVGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKI

Query:  GRKKIPPNIPFAPIDGISFHLEESV
        GRKKIPPNIPFAPIDGISFHLEES+
Subjt:  GRKKIPPNIPFAPIDGISFHLEESV

TrEMBL top hitse value%identityAlignment
A0A1S3CHR6 uncharacterized protein LOC1035010503.4e-9988Show/hide
Query:  MHGVRMRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLVSL---------------------
        MHGVRMRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLVSL                     
Subjt:  MHGVRMRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLVSL---------------------

Query:  -----SSIQTSSLADIQLSVPDPNPVGQSTVNVDENVANNDGENLDEDVGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKI
             SSIQTSSLADIQLSVPDPNPVGQSTVNVDENVANNDGENLDEDVGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKI
Subjt:  -----SSIQTSSLADIQLSVPDPNPVGQSTVNVDENVANNDGENLDEDVGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKI

Query:  GRKKIPPNIPFAPIDGISFHLEESV
        GRKKIPPNIPFAPIDGISFHLEES+
Subjt:  GRKKIPPNIPFAPIDGISFHLEESV

A0A5A7TFT6 Uncharacterized protein5.3e-5260.3Show/hide
Query:  MRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLVSLSSIQTSSLADIQLSVPDPNPVGQSTV
        MRGH FKSTPSRRPY L  EKNQV L DSS++S+HDE + G   +N++SE VVS+S+MSEMDS+ERD+VPL + S   +    D+Q SVPDP+ V QS+ 
Subjt:  MRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLVSLSSIQTSSLADIQLSVPDPNPVGQSTV

Query:  NVDENVANNDGENLDEDVGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKIGRKKIPPNIPFAPIDGISFHLEESVQRWKY
        NV        GEN+ E+VGKHVEP +N AP  VEPN + P T+ EQP AD KSK  K Q+ R  +TTK GRKKI PNIP  PIDGISF L+ESVQRWKY
Subjt:  NVDENVANNDGENLDEDVGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKIGRKKIPPNIPFAPIDGISFHLEESVQRWKY

A0A5A7TSJ3 Uncharacterized protein3.3e-10287.07Show/hide
Query:  MHGVRMRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLVSL---------------------
        MHGVRMRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLVSL                     
Subjt:  MHGVRMRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLVSL---------------------

Query:  -----SSIQTSSLADIQLSVPDPNPVGQSTVNVDENVANNDGENLDEDVGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKI
             SSIQTSSLADIQLSVPDPNPVGQSTVNVDENVANNDGENLDEDVGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKI
Subjt:  -----SSIQTSSLADIQLSVPDPNPVGQSTVNVDENVANNDGENLDEDVGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKI

Query:  GRKKIPPNIPFAPIDGISFHLEESVQRWKYIV
        GRKKIPPNIPFAPIDGISFHLEESVQRW   +
Subjt:  GRKKIPPNIPFAPIDGISFHLEESVQRWKYIV

A0A5A7U0B3 Envelope-like protein1.8e-5257.14Show/hide
Query:  MHGVRMRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLV-----SLSSIQTSSLADIQLS--
        MHGVR+R   F+STP+RRPYC   EKNQVN FD  NLS+HD+   GI  ENV++ESVV +SHMS+MDS+ERDDVPL       L S   S++AD  ++  
Subjt:  MHGVRMRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLV-----SLSSIQTSSLADIQLS--

Query:  ----------VPDPNPVGQST--------VNVDENVANNDGENLDEDVGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKIG
                  +  P PVGQST         NVD N+A+N  EN +E+V  HVEP DN AP DVEPNVNAPQT+ EQP  + + KGKK QQ+R NITTK G
Subjt:  ----------VPDPNPVGQST--------VNVDENVANNDGENLDEDVGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKIG

Query:  RKKIPPNIPFAPIDGISFHLEESV
        RKKIP NIP   IDGISFHLEESV
Subjt:  RKKIPPNIPFAPIDGISFHLEESV

A0A5D3BKG6 Uncharacterized protein4.1e-4457.07Show/hide
Query:  SFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLVSLSSIQTSSLADIQLSVPDPNPVGQSTVNVDENVANNDGENLDED
        S  KNQV L DSS++S+HDE + G   +N++SE VVS+S+MSEMDS+ERD+VPL  LS   +    D+Q SVPDP+ V QS+ NV        GEN+ E+
Subjt:  SFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLVSLSSIQTSSLADIQLSVPDPNPVGQSTVNVDENVANNDGENLDED

Query:  VGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKIGRKKIPPNIPFAPIDGISFHLEESVQRWKYIV
        VGKHVEP +N AP  VEPN + P T+ EQP AD KSK  K Q+ R  +TTK GRKKI PNIP  PIDGISF L+ESVQRW + V
Subjt:  VGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKIGRKKIPPNIPFAPIDGISFHLEESVQRWKYIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGGCGTTCGCATGAGAGGTCATCGATTTAAAAGCACTCCCTCTCGAAGACCTTATTGCCTATCGTTTGAAAAGAATCAAGTAAATCTTTTTGATAGCTCAAATTT
ATCTGTGCATGATGAGAAGATGGTTGGTATTGTTGCTGAGAATGTCGAATCTGAATCGGTTGTCTCTAAGTCTCATATGTCTGAAATGGATTCGAATGAAAGAGATGATG
TTCCACTAGTTAGCTTGTCTTCTATTCAGACTAGTTCACTAGCTGATATCCAACTGTCTGTTCCTGATCCTAACCCTGTGGGTCAGTCTACTGTTAATGTTGATGAGAAC
GTTGCTAATAATGACGGTGAAAACCTAGATGAAGATGTTGGTAAGCATGTTGAACCAACTGATAATGGTGCACCTGGTGATGTTGAACCTAATGTGAATGCTCCTCAAAC
TAAATCTGAACAACCTAGTGCTGACCCAAAATCAAAAGGGAAGAAATTACAACAAAATCGTCATAACATTACTACGAAAATTGGGAGGAAGAAGATTCCACCGAATATTC
CATTTGCCCCCATTGATGGAATCTCATTTCATCTCGAAGAAAGTGTGCAACGGTGGAAGTATATAGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCATGGCGTTCGCATGAGAGGTCATCGATTTAAAAGCACTCCCTCTCGAAGACCTTATTGCCTATCGTTTGAAAAGAATCAAGTAAATCTTTTTGATAGCTCAAATTT
ATCTGTGCATGATGAGAAGATGGTTGGTATTGTTGCTGAGAATGTCGAATCTGAATCGGTTGTCTCTAAGTCTCATATGTCTGAAATGGATTCGAATGAAAGAGATGATG
TTCCACTAGTTAGCTTGTCTTCTATTCAGACTAGTTCACTAGCTGATATCCAACTGTCTGTTCCTGATCCTAACCCTGTGGGTCAGTCTACTGTTAATGTTGATGAGAAC
GTTGCTAATAATGACGGTGAAAACCTAGATGAAGATGTTGGTAAGCATGTTGAACCAACTGATAATGGTGCACCTGGTGATGTTGAACCTAATGTGAATGCTCCTCAAAC
TAAATCTGAACAACCTAGTGCTGACCCAAAATCAAAAGGGAAGAAATTACAACAAAATCGTCATAACATTACTACGAAAATTGGGAGGAAGAAGATTCCACCGAATATTC
CATTTGCCCCCATTGATGGAATCTCATTTCATCTCGAAGAAAGTGTGCAACGGTGGAAGTATATAGTGTAG
Protein sequenceShow/hide protein sequence
MHGVRMRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSKSHMSEMDSNERDDVPLVSLSSIQTSSLADIQLSVPDPNPVGQSTVNVDEN
VANNDGENLDEDVGKHVEPTDNGAPGDVEPNVNAPQTKSEQPSADPKSKGKKLQQNRHNITTKIGRKKIPPNIPFAPIDGISFHLEESVQRWKYIV