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IVF0025292 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025292
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr12:6328183..6328377
RNA-Seq ExpressionIVF0025292
SyntenyIVF0025292
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045334.1 hypothetical protein E6C27_scaffold316G001090 [Cucumis melo var. makuwa]4.98e-2184.62Show/hide
Query:  MVEKFRLKYLPTLARYSQTDMVGGKCNLVGLNRIRTLHQNKEEERHQKTQKQ
        MVEK  LKYL TLARY QTDMVGGKCNLVGLNR RTLHQNKEEE HQK Q+Q
Subjt:  MVEKFRLKYLPTLARYSQTDMVGGKCNLVGLNRIRTLHQNKEEERHQKTQKQ

KAA0054399.1 hypothetical protein E6C27_scaffold24G001450 [Cucumis melo var. makuwa]9.92e-1260.94Show/hide
Query:  MRNPKGAKSFSTMVEKFRLKYLPTLARYSQTDMVGGKCNLVGLNRIRTLHQNKEEERHQKTQKQ
        M++ K    F + VEK  LKYLPTLA+Y Q  M  G+ NL GL+RI +LHQNKEEER QKTQKQ
Subjt:  MRNPKGAKSFSTMVEKFRLKYLPTLARYSQTDMVGGKCNLVGLNRIRTLHQNKEEERHQKTQKQ

KAA0060350.1 hypothetical protein E6C27_scaffold22G001410 [Cucumis melo var. makuwa]4.13e-1363.16Show/hide
Query:  KGAKSFSTMVEKFRLKYLPTLARYSQTDMVGGKCNLVGLNRIRTLHQNKEEERHQKT
        +GAK F T +EK   KYLPTLARY + +M GG+ NL GLNR+RTLH NKEEE  Q T
Subjt:  KGAKSFSTMVEKFRLKYLPTLARYSQTDMVGGKCNLVGLNRIRTLHQNKEEERHQKT

KAA0063168.1 hypothetical protein E6C27_scaffold381G00540 [Cucumis melo var. makuwa]3.90e-2078.57Show/hide
Query:  MRNPKGAKSFSTMVEKFRLKYLPTLARYSQTDMVGGKCNLVGLNRIRTLHQNKEEE
        MRNPKG+KSF TM +KF  KYL TLARY QTDMVGGKCN+  LNRIRTL+QNKEEE
Subjt:  MRNPKGAKSFSTMVEKFRLKYLPTLARYSQTDMVGGKCNLVGLNRIRTLHQNKEEE

KGN57724.1 hypothetical protein Csa_010778 [Cucumis sativus]2.99e-1357.81Show/hide
Query:  MRNPKGAKSFSTMVEKFRLKYLPTLARYSQTDMVGGKCNLVGLNRIRTLHQNKEEERHQKTQKQ
        M++PK  K F T VEK   KYLPT  RY Q +M GG+ NL GLNR+R++H NKE    QKTQKQ
Subjt:  MRNPKGAKSFSTMVEKFRLKYLPTLARYSQTDMVGGKCNLVGLNRIRTLHQNKEEERHQKTQKQ

TrEMBL top hitse value%identityAlignment
A0A0A0L9R5 Uncharacterized protein5.0e-0957.81Show/hide
Query:  MRNPKGAKSFSTMVEKFRLKYLPTLARYSQTDMVGGKCNLVGLNRIRTLHQNKEEERHQKTQKQ
        M++PK  K F T VEK   KYLPT  RY Q +M GG+ NL GLNR+R++H NKE    QKTQKQ
Subjt:  MRNPKGAKSFSTMVEKFRLKYLPTLARYSQTDMVGGKCNLVGLNRIRTLHQNKEEERHQKTQKQ

A0A5A7TQD8 Uncharacterized protein4.7e-1584.62Show/hide
Query:  MVEKFRLKYLPTLARYSQTDMVGGKCNLVGLNRIRTLHQNKEEERHQKTQKQ
        MVEK  LKYL TLARY QTDMVGGKCNLVGLNR RTLHQNKEEE HQK Q+Q
Subjt:  MVEKFRLKYLPTLARYSQTDMVGGKCNLVGLNRIRTLHQNKEEERHQKTQKQ

A0A5A7ULS0 Uncharacterized protein5.0e-0960.94Show/hide
Query:  MRNPKGAKSFSTMVEKFRLKYLPTLARYSQTDMVGGKCNLVGLNRIRTLHQNKEEERHQKTQKQ
        M++ K    F + VEK  LKYLPTLA+Y Q  M  G+ NL GL+RI +LHQNKEEER QKTQKQ
Subjt:  MRNPKGAKSFSTMVEKFRLKYLPTLARYSQTDMVGGKCNLVGLNRIRTLHQNKEEERHQKTQKQ

A0A5A7V6C0 Uncharacterized protein1.6e-1572.58Show/hide
Query:  MRNPKGAKSFSTMVEKFRLKYLPTLARYSQTDMVGGKCNLVGLNRIRTLHQNKEEERHQKTQ
        MRNPKG+KSF TM +KF  KYL TLARY QTDMVGGKCN+  LNRIRTL+QNKEEE   K +
Subjt:  MRNPKGAKSFSTMVEKFRLKYLPTLARYSQTDMVGGKCNLVGLNRIRTLHQNKEEERHQKTQ

A0A5D3DFD3 Uncharacterized protein3.8e-0963.16Show/hide
Query:  KGAKSFSTMVEKFRLKYLPTLARYSQTDMVGGKCNLVGLNRIRTLHQNKEEERHQKT
        +GAK F T +EK   KYLPTLARY + +M GG+ NL GLNR+RTLH NKEEE  Q T
Subjt:  KGAKSFSTMVEKFRLKYLPTLARYSQTDMVGGKCNLVGLNRIRTLHQNKEEERHQKT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAACCCTAAAGGCGCCAAGTCGTTCTCGACAATGGTAGAGAAATTCAGACTGAAATATTTGCCTACCCTCGCGAGATACTCCCAGACTGATATGGTGGGAGGCAA
GTGTAACTTGGTAGGCCTCAATCGCATAAGAACCCTCCATCAAAACAAGGAGGAAGAACGCCACCAAAAGACACAAAAGCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAACCCTAAAGGCGCCAAGTCGTTCTCGACAATGGTAGAGAAATTCAGACTGAAATATTTGCCTACCCTCGCGAGATACTCCCAGACTGATATGGTGGGAGGCAA
GTGTAACTTGGTAGGCCTCAATCGCATAAGAACCCTCCATCAAAACAAGGAGGAAGAACGCCACCAAAAGACACAAAAGCAATAA
Protein sequenceShow/hide protein sequence
MRNPKGAKSFSTMVEKFRLKYLPTLARYSQTDMVGGKCNLVGLNRIRTLHQNKEEERHQKTQKQ