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IVF0025316 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025316
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationchr12:16438009..16438448
RNA-Seq ExpressionIVF0025316
SyntenyIVF0025316
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039600.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]2.04e-4267.61Show/hide
Query:  MDRVAGLGIKGQKRSTEA-------------------------VTRPHP-PSRIAAAHPNFAVRTIPSAFIPTSQFARSLRRSVPAAFTTSLLAVLRFHL
        M RVAGLGIKG+   T+                           +R  P PSRIA AHPNFAV TIPSAFIPTSQFARSLR SVPAAFTTSL  VLRFHL
Subjt:  MDRVAGLGIKGQKRSTEA-------------------------VTRPHP-PSRIAAAHPNFAVRTIPSAFIPTSQFARSLRRSVPAAFTTSLLAVLRFHL

Query:  ATSGGSSFSSRNFRQRSDRNFNFFSSPAFRSTSLQGFFILSK
        ATSG SSFSS NFRQRSDR+FNFFSSPAFRS SLQGFFILSK
Subjt:  ATSGGSSFSSRNFRQRSDRNFNFFSSPAFRSTSLQGFFILSK
TrEMBL top hitse value%identityAlignment
A0A5A7T8M8 Zinc finger BED domain-containing protein RICESLEEPER 2-like2.0e-3566.2Show/hide
Query:  MDRVAGLGIKGQKRSTE--------------------------AVTRPHPPSRIAAAHPNFAVRTIPSAFIPTSQFARSLRRSVPAAFTTSLLAVLRFHL
        M RVAGLGIKG+   T+                          +  +   PSRIA AHPNFAV TIPSAFIPTSQFARSLR SVPAAFTTSL  VLRFHL
Subjt:  MDRVAGLGIKGQKRSTE--------------------------AVTRPHPPSRIAAAHPNFAVRTIPSAFIPTSQFARSLRRSVPAAFTTSLLAVLRFHL

Query:  ATSGGSSFSSRNFRQRSDRNFNFFSSPAFRSTSLQGFFILSK
        ATSG SSFSS NFRQRSDR+FNFFSSPAFRS SLQGFFILSK
Subjt:  ATSGGSSFSSRNFRQRSDRNFNFFSSPAFRSTSLQGFFILSK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCGGGTTGCAGGGTTGGGAATTAAGGGCCAGAAGAGAAGCACTGAAGCAGTCACACGACCCCATCCCCCTTCGCGAATCGCGGCCGCGCATCCCAACTTCGCAGT
TCGCACGATCCCTTCGGCGTTCATCCCAACTTCGCAGTTCGCACGATCCCTTCGACGTTCAGTTCCGGCGGCCTTCACAACTTCACTTCTGGCGGTTCTTCGTTTTCATC
TCGCAACTTCCGGCGGTTCTTCGTTCTCATCTCGCAACTTCCGACAGCGTTCAGATCGCAACTTCAATTTCTTTTCATCTCCCGCATTCCGATCGACGTCTCTCCAAGGG
TTCTTCATTTTGTCCAAGGTTTGTTCTTTGTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACCGGGTTGCAGGGTTGGGAATTAAGGGCCAGAAGAGAAGCACTGAAGCAGTCACACGACCCCATCCCCCTTCGCGAATCGCGGCCGCGCATCCCAACTTCGCAGT
TCGCACGATCCCTTCGGCGTTCATCCCAACTTCGCAGTTCGCACGATCCCTTCGACGTTCAGTTCCGGCGGCCTTCACAACTTCACTTCTGGCGGTTCTTCGTTTTCATC
TCGCAACTTCCGGCGGTTCTTCGTTCTCATCTCGCAACTTCCGACAGCGTTCAGATCGCAACTTCAATTTCTTTTCATCTCCCGCATTCCGATCGACGTCTCTCCAAGGG
TTCTTCATTTTGTCCAAGGTTTGTTCTTTGTTCTGA
Protein sequenceShow/hide protein sequence
MDRVAGLGIKGQKRSTEAVTRPHPPSRIAAAHPNFAVRTIPSAFIPTSQFARSLRRSVPAAFTTSLLAVLRFHLATSGGSSFSSRNFRQRSDRNFNFFSSPAFRSTSLQG
FFILSKVCSLF