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IVF0025320 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025320
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPhotosystem II reaction center protein H
Genome locationchr09:7490948..7491169
RNA-Seq ExpressionIVF0025320
SyntenyIVF0025320
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0050821 - protein stabilization (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0042651 - thylakoid membrane (cellular component)
GO:0042301 - phosphate ion binding (molecular function)
InterPro domainsIPR001056 - Photosystem II reaction centre protein H
IPR036863 - Photosystem II reaction centre protein H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHM91195.1 photosystem II phosphoprotein [Lagenaria siceraria]7.48e-2272.22Show/hide
Query:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEYG-------------VAMGLFAIFLCSILEIYKSSILLDGILS
        M T+ VDDSSRS PRRTIVGDLLKPLNSEYG             VAMGLFAIFLC ILEIY SSILLDGI S
Subjt:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEYG-------------VAMGLFAIFLCSILEIYKSSILLDGILS

QHB75993.1 photosystem II protein H [Cucumis melo subsp. melo]2.14e-2169.44Show/hide
Query:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEYG-------------VAMGLFAIFLCSILEIYKSSILLDGILS
        M T+ VDDSS+S PRRT+VGDLLKPLNSEYG             VAMGLFAIFLC ILEIY SSILLDGI S
Subjt:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEYG-------------VAMGLFAIFLCSILEIYKSSILLDGILS

YP_004841812.1 photosystem II phosphoprotein [Cucumis melo subsp. melo]7.48e-2270.83Show/hide
Query:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEYG-------------VAMGLFAIFLCSILEIYKSSILLDGILS
        M T+ VDDSSRS PRRT+VGDLLKPLNSEYG             VAMGLFAIFLC ILEIY SSILLDGI S
Subjt:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEYG-------------VAMGLFAIFLCSILEIYKSSILLDGILS

YP_009326018.1 photosystem II protein H [Citrullus lanatus]5.26e-2272.22Show/hide
Query:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEYG-------------VAMGLFAIFLCSILEIYKSSILLDGILS
        M T+ VDDSSRS PRRTIVGDLLKPLNSEYG             VAMGLFAIFLC ILEIY SSILLDGI S
Subjt:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEYG-------------VAMGLFAIFLCSILEIYKSSILLDGILS

YP_009346513.1 photosystem II phosphoprotein [Cucumis x hytivus]3.05e-2169.44Show/hide
Query:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEYG-------------VAMGLFAIFLCSILEIYKSSILLDGILS
        M T+ VDDSSRS PRRT+VGDLLKPLNSEYG             VAMGLF IFLC ILEIY SSILLDGI S
Subjt:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEYG-------------VAMGLFAIFLCSILEIYKSSILLDGILS

TrEMBL top hitse value%identityAlignment
A0A1P8LE91 Photosystem II reaction center protein H3.4e-1572.22Show/hide
Query:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEY-------------GVAMGLFAIFLCSILEIYKSSILLDGILS
        M T+ VDDSSRS PRRTIVGDLLKPLNSEY             GVAMGLFAIFLC ILEIY SSILLDGI S
Subjt:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEY-------------GVAMGLFAIFLCSILEIYKSSILLDGILS

A0A1P8LEZ9 Photosystem II reaction center protein H3.4e-1572.22Show/hide
Query:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEY-------------GVAMGLFAIFLCSILEIYKSSILLDGILS
        M T+ VDDSSRS PRRTIVGDLLKPLNSEY             GVAMGLFAIFLC ILEIY SSILLDGI S
Subjt:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEY-------------GVAMGLFAIFLCSILEIYKSSILLDGILS

A0A343A8D9 Photosystem II reaction center protein H3.4e-1572.22Show/hide
Query:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEY-------------GVAMGLFAIFLCSILEIYKSSILLDGILS
        M T+ VDDSSRS PRRTIVGDLLKPLNSEY             GVAMGLFAIFLC ILEIY SSILLDGI S
Subjt:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEY-------------GVAMGLFAIFLCSILEIYKSSILLDGILS

A0A7T3USX9 Photosystem II phosphoprotein3.4e-1572.22Show/hide
Query:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEY-------------GVAMGLFAIFLCSILEIYKSSILLDGILS
        M T+ VDDSSRS PRRTIVGDLLKPLNSEY             GVAMGLFAIFLC ILEIY SSILLDGI S
Subjt:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEY-------------GVAMGLFAIFLCSILEIYKSSILLDGILS

X2F4E0 Photosystem II reaction center protein H3.4e-1572.22Show/hide
Query:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEY-------------GVAMGLFAIFLCSILEIYKSSILLDGILS
        M T+ VDDSSRS PRRTIVGDLLKPLNSEY             GVAMGLFAIFLC ILEIY SSILLDGI S
Subjt:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEY-------------GVAMGLFAIFLCSILEIYKSSILLDGILS

SwissProt top hitse value%identityAlignment
Q06GN1 Photosystem II reaction center protein H5.5e-1563.38Show/hide
Query:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEY-------------GVAMGLFAIFLCSILEIYKSSILLDGIL
        M T+ V+DSS+S PRRT++GDLLKPLNSEY             GVAM LFAIFL  ILEIY SS+LLDGIL
Subjt:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEY-------------GVAMGLFAIFLCSILEIYKSSILLDGIL

Q2PMQ6 Photosystem II reaction center protein H7.2e-1565.71Show/hide
Query:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEY-------------GVAMGLFAIFLCSILEIYKSSILLDGI
        M T+ V+D+SRS PRRT+VGDLLKPLNSEY             GVAM LFAIFL  ILEIY SSILLDGI
Subjt:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEY-------------GVAMGLFAIFLCSILEIYKSSILLDGI

Q49KW9 Photosystem II reaction center protein H2.7e-1464.29Show/hide
Query:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEY-------------GVAMGLFAIFLCSILEIYKSSILLDGI
        M T+ V+ SSRS PRRTIVGDLLKPLNSEY             GVAM LFA+FL  ILEIY SS+LLDGI
Subjt:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEY-------------GVAMGLFAIFLCSILEIYKSSILLDGI

Q4VZI9 Photosystem II reaction center protein H1.3e-1668.06Show/hide
Query:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEY-------------GVAMGLFAIFLCSILEIYKSSILLDGILS
        M T+ VDDSS+S PRRT+VGDLLKPLNSEY             GVAM LFAIFLC ILEIY SSILLDGI S
Subjt:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEY-------------GVAMGLFAIFLCSILEIYKSSILLDGILS

Q70XX9 Photosystem II reaction center protein H4.2e-1567.14Show/hide
Query:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEY-------------GVAMGLFAIFLCSILEIYKSSILLDGI
        M T+ V+DSSRS PRRTIVGDLLKPLNSEY             GVAM LFAIFL  ILEIY SS+LLDGI
Subjt:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEY-------------GVAMGLFAIFLCSILEIYKSSILLDGI

Arabidopsis top hitse value%identityAlignment
ATCG00710.1 photosystem II reaction center protein H3.7e-1461.43Show/hide
Query:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEY-------------GVAMGLFAIFLCSILEIYKSSILLDGI
        M T+ V+DSSRS PR T VG LLKPLNSEY             GVAM LFA+FL  ILEIY SS+LLDGI
Subjt:  MTTKIVDDSSRSRPRRTIVGDLLKPLNSEY-------------GVAMGLFAIFLCSILEIYKSSILLDGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACAAAAATTGTTGACGATAGTTCTAGATCTAGGCCAAGACGAACTATTGTAGGGGATTTATTAAAACCATTGAATTCAGAATATGGTGTTGCGATGGGTTTATT
TGCGATATTCCTGTGTAGTATTTTGGAGATTTATAAATCTTCCATTTTATTGGATGGAATTTTAAGCATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAACAAAAATTGTTGACGATAGTTCTAGATCTAGGCCAAGACGAACTATTGTAGGGGATTTATTAAAACCATTGAATTCAGAATATGGTGTTGCGATGGGTTTATT
TGCGATATTCCTGTGTAGTATTTTGGAGATTTATAAATCTTCCATTTTATTGGATGGAATTTTAAGCATTTAG
Protein sequenceShow/hide protein sequence
MTTKIVDDSSRSRPRRTIVGDLLKPLNSEYGVAMGLFAIFLCSILEIYKSSILLDGILSI