; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0025340 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025340
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionprotein LATERAL ROOT PRIMORDIUM 1
Genome locationchr02:6710131..6712870
RNA-Seq ExpressionIVF0025340
SyntenyIVF0025340
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056003.1 protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa]1.39e-212100Show/hide
Query:  MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDEGGGGIQFNGNNLDGFGILGGGSSLNSGVGTCHDCG
        MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDEGGGGIQFNGNNLDGFGILGGGSSLNSGVGTCHDCG
Subjt:  MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDEGGGGIQFNGNNLDGFGILGGGSSLNSGVGTCHDCG

Query:  NQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSKK
        NQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSKK
Subjt:  NQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSKK

Query:  AKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGGLAGGS
        AKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGGLAGGS
Subjt:  AKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGGLAGGS

Query:  GYGNSIN
        GYGNSIN
Subjt:  GYGNSIN

XP_008450344.1 PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo]1.46e-213100Show/hide
Query:  MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDEGGGGIQFNGNNLDGFGILGGGSSLNSGVGTCHDCG
        MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDEGGGGIQFNGNNLDGFGILGGGSSLNSGVGTCHDCG
Subjt:  MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDEGGGGIQFNGNNLDGFGILGGGSSLNSGVGTCHDCG

Query:  NQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSKK
        NQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSKK
Subjt:  NQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSKK

Query:  AKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGGLAGGS
        AKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGGLAGGS
Subjt:  AKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGGLAGGS

Query:  GYGNSIN
        GYGNSIN
Subjt:  GYGNSIN

XP_011660164.1 protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus]4.67e-21098.05Show/hide
Query:  MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDEGGGGIQFNGNNLDGFGILGGGSSLNSGVGTCHDCG
        MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLL+GLAPSSVGIEEANLMISRGGGGD+GGGGIQFNGNNLDGFGILGGGSSLNSGVGTCHDCG
Subjt:  MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDEGGGGIQFNGNNLDGFGILGGGSSLNSGVGTCHDCG

Query:  NQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSKK
        NQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSKK
Subjt:  NQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSKK

Query:  AKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGGLAGGS
        AKKLPEQIRAPAVFKCVRVTAVEGG+SGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP MSNLHLGDGGSTSSPVIDP+DVYGSS TRGGGLAGGS
Subjt:  AKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGGLAGGS

Query:  GYGNSIN
        GYGNSIN
Subjt:  GYGNSIN

XP_022974160.1 protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Cucurbita maxima]2.41e-17584.49Show/hide
Query:  MWPSS---RPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDEGGGG--IQFNGNNLDGFGILGGGSSLNSGVGT
        MWPSS   RP+   Y HT  P  DMVGLMASG+GVG+SVLPLLTG+APSSVGIEE NLMISRGGGGD GGGG  +QF+GNN DGFG LGGGSSLNSGVGT
Subjt:  MWPSS---RPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDEGGGG--IQFNGNNLDGFGILGGGSSLNSGVGT

Query:  CHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAA-GGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAA
        CHDCGNQAKKDC+HRRCRSCCKSRGFDC+THVKSTWVPAARRRERQ++ AA+ AAA GGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPT SFD  SAA
Subjt:  CHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAA-GGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAA

Query:  DMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLG---DGGSTSSPVIDPSDVYGSSAT
        DMS K+AKKLPEQ+RAPAVFKCVRVTAVEGG SGG NEYAYQAVVKIGGHVFKGYLYDHGVEAR+GFP +S+LHLG   DGGSTSSP+IDPSDVYGSSA 
Subjt:  DMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLG---DGGSTSSPVIDPSDVYGSSAT

Query:  RGGGLAGGSGYGNSIN
        RGGGLAGGSGYGN IN
Subjt:  RGGGLAGGSGYGNSIN

XP_038878596.1 protein LATERAL ROOT PRIMORDIUM 1 [Benincasa hispida]2.16e-19793.18Show/hide
Query:  MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGG-GDEGGGGIQFNGNNLDGFGILGGGSSLNSGVGTCHDC
        MWPSSRPL IGY HT AP  DMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGG G  GGGG+QFNGNNLDGFGILGGGSSLNSG GTCHDC
Subjt:  MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGG-GDEGGGGIQFNGNNLDGFGILGGGSSLNSGVGTCHDC

Query:  GNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSK
        GNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQM+ AASD AAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMS K
Subjt:  GNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSK

Query:  KAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGGLAGG
        KAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQA+VKIGGH+FKGYLYDHGVEARDGFPT+SNLHLGDGGSTSSPVIDP+DVYGSSA RGG LAGG
Subjt:  KAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGGLAGG

Query:  SGYGNSIN
        SGYGN IN
Subjt:  SGYGNSIN

TrEMBL top hitse value%identityAlignment
A0A0A0M099 Transcription factor1.7e-16398.05Show/hide
Query:  MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDEGGGGIQFNGNNLDGFGILGGGSSLNSGVGTCHDCG
        MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLL+GLAPSSVGIEEANLMISRGGGGD+GGGGIQFNGNNLDGFGILGGGSSLNSGVGTCHDCG
Subjt:  MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDEGGGGIQFNGNNLDGFGILGGGSSLNSGVGTCHDCG

Query:  NQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSKK
        NQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSKK
Subjt:  NQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSKK

Query:  AKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGGLAGGS
        AKKLPEQIRAPAVFKCVRVTAVEGG+SGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFP MSNLHLGDGGSTSSPVIDP+DVYGSS TRGGGLAGGS
Subjt:  AKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGGLAGGS

Query:  GYGNSIN
        GYGNSIN
Subjt:  GYGNSIN

A0A1S3BQ17 protein LATERAL ROOT PRIMORDIUM 13.7e-166100Show/hide
Query:  MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDEGGGGIQFNGNNLDGFGILGGGSSLNSGVGTCHDCG
        MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDEGGGGIQFNGNNLDGFGILGGGSSLNSGVGTCHDCG
Subjt:  MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDEGGGGIQFNGNNLDGFGILGGGSSLNSGVGTCHDCG

Query:  NQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSKK
        NQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSKK
Subjt:  NQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSKK

Query:  AKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGGLAGGS
        AKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGGLAGGS
Subjt:  AKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGGLAGGS

Query:  GYGNSIN
        GYGNSIN
Subjt:  GYGNSIN

A0A5A7UJ85 Protein LATERAL ROOT PRIMORDIUM 13.7e-166100Show/hide
Query:  MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDEGGGGIQFNGNNLDGFGILGGGSSLNSGVGTCHDCG
        MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDEGGGGIQFNGNNLDGFGILGGGSSLNSGVGTCHDCG
Subjt:  MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDEGGGGIQFNGNNLDGFGILGGGSSLNSGVGTCHDCG

Query:  NQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSKK
        NQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSKK
Subjt:  NQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSKK

Query:  AKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGGLAGGS
        AKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGGLAGGS
Subjt:  AKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGGLAGGS

Query:  GYGNSIN
        GYGNSIN
Subjt:  GYGNSIN

A0A6J1F4X3 protein LATERAL ROOT PRIMORDIUM 1-like isoform X16.7e-13683.76Show/hide
Query:  MWP---SSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDEGGGGIQFNGNNLDGFGILGGGSSLNSGVGTCH
        MWP   S+RP+   Y HT  P  DMVGLMASG+GVG+SVLPLLTGLAPSSVGIEE NLMISRGG G  GGGG+QF+GNN DGFG LGGGSSLNSGVGTCH
Subjt:  MWP---SSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDEGGGGIQFNGNNLDGFGILGGGSSLNSGVGTCH

Query:  DCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAA-GGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADM
        DCGNQAKKDC+HRRCRSCCKSRGFDC+THVKSTWVPAARRRERQ++ AA+ AAA GGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPT SFD  SAADM
Subjt:  DCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAA-GGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADM

Query:  SSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHL---GDGGSTSSPVIDPSDVYGSSATRG
        S K+AKKLPEQ+RAPAVFKCVRVTAVEGG + GGNEYAYQAVVKIGGHVFKGYLYDHGVEAR+GFP +S+LHL   GDGGSTSSP+IDPSDVYGSSA RG
Subjt:  SSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHL---GDGGSTSSPVIDPSDVYGSSATRG

Query:  GGLAGGSGYGNSIN
        GGLAG SGYGN IN
Subjt:  GGLAGGSGYGNSIN

A0A6J1ID91 protein LATERAL ROOT PRIMORDIUM 1-like isoform X13.6e-13784.49Show/hide
Query:  MWP---SSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGD--EGGGGIQFNGNNLDGFGILGGGSSLNSGVGT
        MWP   SSRP+   Y HT  P  DMVGLMASG+GVG+SVLPLLTG+APSSVGIEE NLMISRGGGGD   GGGG+QF+GNN DGFG LGGGSSLNSGVGT
Subjt:  MWP---SSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGD--EGGGGIQFNGNNLDGFGILGGGSSLNSGVGT

Query:  CHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAA-GGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAA
        CHDCGNQAKKDC+HRRCRSCCKSRGFDC+THVKSTWVPAARRRERQ++ AA+ AAA GGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPT SFD  SAA
Subjt:  CHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAA-GGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAA

Query:  DMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHL---GDGGSTSSPVIDPSDVYGSSAT
        DMS K+AKKLPEQ+RAPAVFKCVRVTAVEGG S GGNEYAYQAVVKIGGHVFKGYLYDHGVEAR+GFP +S+LHL   GDGGSTSSP+IDPSDVYGSSA 
Subjt:  DMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHL---GDGGSTSSPVIDPSDVYGSSAT

Query:  RGGGLAGGSGYGNSIN
        RGGGLAGGSGYGN IN
Subjt:  RGGGLAGGSGYGNSIN

SwissProt top hitse value%identityAlignment
O65517 Protein SHI RELATED SEQUENCE 22.5e-3143.28Show/hide
Query:  TCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAA
        +C DCGNQAKKDC+H RCR+CCKSRGFDCSTHV+STW+P ARRRERQ     S +  GG S    +GG    +           ++S++  PS  A    
Subjt:  TCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAA

Query:  DMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGG
          +S      P ++ + A+F+CV+++ V+    GG  +YAYQ  V IGGH+FKG LYD G       P  S +  G GG         SD   SSA  GG
Subjt:  DMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGG

Query:  G
        G
Subjt:  G

Q94CK9 Protein LATERAL ROOT PRIMORDIUM 16.0e-5749.48Show/hide
Query:  ASGFGVGVSVLPLLTGLAPSSVGIEEANLMIS------RGGGGDEGGGGIQFNGNNLDGFGIL---GGGSSLNSGVGTCHDCGNQAKKDCSHRRCRSCCK
        A+   +GV V+PLLT   P    +E++++         +    +     + F   N    G      G  S  SG  TC DCGNQAKK+C  RRCR+CCK
Subjt:  ASGFGVGVSVLPLLTGLAPSSVGIEEANLMIS------RGGGGDEGGGGIQFNGNNLDGFGIL---GGGSSLNSGVGTCHDCGNQAKKDCSHRRCRSCCK

Query:  SRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAV
        SRGFDCSTHVKSTWV AARRRERQ+M   ++  A G+S  ++SG KKPR++ S    Q    SHTSTSNTP  SF+ SS+        +  P Q+RA AV
Subjt:  SRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAV

Query:  FKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLG------DGGSTSSPVIDPSD-VYGSSATRGGG
        FKCVRVTAVE G     +EYAYQAVVKIGGHVFKG+LYD G+E ++GFP+MS+LHLG      +G S S+P++DP + VYG     GGG
Subjt:  FKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLG------DGGSTSSPVIDPSD-VYGSSATRGGG

Q9LQZ5 Protein SHI RELATED SEQUENCE 51.2e-2838.12Show/hide
Query:  GGGSSLNSGVGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSH------
        GG +    G   C DCGNQAKKDC H RCR+CCKSRGF C THVKSTWVPAA+RRER  +   +       SS  T   K+ R  +     +        
Subjt:  GGGSSLNSGVGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSH------

Query:  -TSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGF--------PTMSNLH
         ++ +NT   + +++S  ++S    + LP ++ +PA+F+CVRV+++E         YAYQ  V IGGH+FKG LYD G E +D           T +N+ 
Subjt:  -TSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGF--------PTMSNLH

Query:  -----LGDGGSTSSPVIDPSDVY
                G + +  ++DPS +Y
Subjt:  -----LGDGGSTSSPVIDPSDVY

Q9SD40 Protein SHI RELATED SEQUENCE 11.4e-2939.29Show/hide
Query:  ILGGGSSLNSGVGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTS
        I  GGS   SG  +C DCGNQAKKDCSH RCR+CCKSRGF+CSTHV+STWVPAA+RRERQ   A                  + +L   ++    H    
Subjt:  ILGGGSSLNSGVGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTS

Query:  NTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDG----FPTMSNLHLGDGGSTSS
           + S   +     S  +    P ++ + AVF+CVRV++VE G      E+AYQ  V IGGH+FKG LYD G  +  G             G GG+   
Subjt:  NTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDG----FPTMSNLHLGDGGSTSS

Query:  PVIDPSDVYGSSATRGGGLAGGSG
         +I    V  ++A+      GG G
Subjt:  PVIDPSDVYGSSATRGGGLAGGSG

Q9XGX0 Protein SHORT INTERNODES3.1e-2942.11Show/hide
Query:  SSLNSGVGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTP
        S   SG  +C DCGNQ+KKDCSH RCR+CCKSRG DC THVKSTWVPAA+RRERQ   +               GG  P+    +    S TS + T  P
Subjt:  SSLNSGVGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTP

Query:  SFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARD----GFPTMSNLHLGDGGSTSSPVIDP
        S + S        +    P ++ + AVF+CVRV++V+        EYAY+  V IGGHVFKG LYD G   R     G   ++ +  G   S+SSP +  
Subjt:  SFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARD----GFPTMSNLHLGDGGSTSSPVIDP

Query:  SD-VYGSSA
        ++ V GS++
Subjt:  SD-VYGSSA

Arabidopsis top hitse value%identityAlignment
AT3G51060.1 Lateral root primordium (LRP) protein-related9.9e-3139.29Show/hide
Query:  ILGGGSSLNSGVGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTS
        I  GGS   SG  +C DCGNQAKKDCSH RCR+CCKSRGF+CSTHV+STWVPAA+RRERQ   A                  + +L   ++    H    
Subjt:  ILGGGSSLNSGVGTCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTS

Query:  NTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDG----FPTMSNLHLGDGGSTSS
           + S   +     S  +    P ++ + AVF+CVRV++VE G      E+AYQ  V IGGH+FKG LYD G  +  G             G GG+   
Subjt:  NTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDG----FPTMSNLHLGDGGSTSS

Query:  PVIDPSDVYGSSATRGGGLAGGSG
         +I    V  ++A+      GG G
Subjt:  PVIDPSDVYGSSATRGGGLAGGSG

AT4G36260.1 Lateral root primordium (LRP) protein-related1.8e-3243.28Show/hide
Query:  TCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAA
        +C DCGNQAKKDC+H RCR+CCKSRGFDCSTHV+STW+P ARRRERQ     S +  GG S    +GG    +           ++S++  PS  A    
Subjt:  TCHDCGNQAKKDCSHRRCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAA

Query:  DMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGG
          +S      P ++ + A+F+CV+++ V+    GG  +YAYQ  V IGGH+FKG LYD G       P  S +  G GG         SD   SSA  GG
Subjt:  DMSSKKAKKLPEQIRAPAVFKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGG

Query:  G
        G
Subjt:  G

AT5G12330.1 Lateral root primordium (LRP) protein-related4.3e-5849.48Show/hide
Query:  ASGFGVGVSVLPLLTGLAPSSVGIEEANLMIS------RGGGGDEGGGGIQFNGNNLDGFGIL---GGGSSLNSGVGTCHDCGNQAKKDCSHRRCRSCCK
        A+   +GV V+PLLT   P    +E++++         +    +     + F   N    G      G  S  SG  TC DCGNQAKK+C  RRCR+CCK
Subjt:  ASGFGVGVSVLPLLTGLAPSSVGIEEANLMIS------RGGGGDEGGGGIQFNGNNLDGFGIL---GGGSSLNSGVGTCHDCGNQAKKDCSHRRCRSCCK

Query:  SRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAV
        SRGFDCSTHVKSTWV AARRRERQ+M   ++  A G+S  ++SG KKPR++ S    Q    SHTSTSNTP  SF+ SS+        +  P Q+RA AV
Subjt:  SRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAV

Query:  FKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLG------DGGSTSSPVIDPSD-VYGSSATRGGG
        FKCVRVTAVE G     +EYAYQAVVKIGGHVFKG+LYD G+E ++GFP+MS+LHLG      +G S S+P++DP + VYG     GGG
Subjt:  FKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLG------DGGSTSSPVIDPSD-VYGSSATRGGG

AT5G12330.2 Lateral root primordium (LRP) protein-related4.3e-5849.48Show/hide
Query:  ASGFGVGVSVLPLLTGLAPSSVGIEEANLMIS------RGGGGDEGGGGIQFNGNNLDGFGIL---GGGSSLNSGVGTCHDCGNQAKKDCSHRRCRSCCK
        A+   +GV V+PLLT   P    +E++++         +    +     + F   N    G      G  S  SG  TC DCGNQAKK+C  RRCR+CCK
Subjt:  ASGFGVGVSVLPLLTGLAPSSVGIEEANLMIS------RGGGGDEGGGGIQFNGNNLDGFGIL---GGGSSLNSGVGTCHDCGNQAKKDCSHRRCRSCCK

Query:  SRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAV
        SRGFDCSTHVKSTWV AARRRERQ+M   ++  A G+S  ++SG KKPR++ S    Q    SHTSTSNTP  SF+ SS+        +  P Q+RA AV
Subjt:  SRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAV

Query:  FKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLG------DGGSTSSPVIDPSD-VYGSSATRGGG
        FKCVRVTAVE G     +EYAYQAVVKIGGHVFKG+LYD G+E ++GFP+MS+LHLG      +G S S+P++DP + VYG     GGG
Subjt:  FKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLG------DGGSTSSPVIDPSD-VYGSSATRGGG

AT5G12330.4 Lateral root primordium (LRP) protein-related4.3e-5849.48Show/hide
Query:  ASGFGVGVSVLPLLTGLAPSSVGIEEANLMIS------RGGGGDEGGGGIQFNGNNLDGFGIL---GGGSSLNSGVGTCHDCGNQAKKDCSHRRCRSCCK
        A+   +GV V+PLLT   P    +E++++         +    +     + F   N    G      G  S  SG  TC DCGNQAKK+C  RRCR+CCK
Subjt:  ASGFGVGVSVLPLLTGLAPSSVGIEEANLMIS------RGGGGDEGGGGIQFNGNNLDGFGIL---GGGSSLNSGVGTCHDCGNQAKKDCSHRRCRSCCK

Query:  SRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAV
        SRGFDCSTHVKSTWV AARRRERQ+M   ++  A G+S  ++SG KKPR++ S    Q    SHTSTSNTP  SF+ SS+        +  P Q+RA AV
Subjt:  SRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIAS----QTTTNSHTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAV

Query:  FKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLG------DGGSTSSPVIDPSD-VYGSSATRGGG
        FKCVRVTAVE G     +EYAYQAVVKIGGHVFKG+LYD G+E ++GFP+MS+LHLG      +G S S+P++DP + VYG     GGG
Subjt:  FKCVRVTAVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLG------DGGSTSSPVIDPSD-VYGSSATRGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCCCTCATCCAGACCCCTCACTATCGGTTATAACCACACGCCGGCGCCGACGCCGGATATGGTGGGTCTCATGGCCTCAGGCTTCGGAGTCGGCGTTAGCGTTTT
GCCTCTCCTTACCGGCCTCGCGCCGTCAAGTGTAGGAATTGAAGAAGCTAACTTAATGATCAGCCGTGGCGGCGGCGGCGATGAAGGTGGGGGGGGAATTCAATTCAATG
GGAATAATTTAGATGGGTTTGGGATTTTGGGAGGTGGGTCGAGTTTGAATTCGGGCGTCGGAACTTGCCATGATTGTGGGAACCAAGCCAAGAAAGATTGTAGTCACCGG
CGGTGCCGGAGCTGCTGTAAAAGCCGTGGATTTGATTGTTCAACTCACGTGAAAAGCACGTGGGTGCCGGCAGCTAGAAGGAGAGAACGTCAGATGATGGGTGCGGCGTC
GGATGCAGCGGCCGGCGGGACATCGTCGGGGTCTACGTCCGGCGGGAAGAAGCCGAGGTTGATTGCTTCACAGACGACTACTAATTCTCATACTTCCACTTCAAATACTC
CAACACCAAGCTTTGACGCTTCCTCAGCCGCTGATATGAGTAGTAAAAAGGCAAAAAAGCTGCCGGAACAAATCCGAGCGCCGGCGGTGTTCAAATGCGTCCGGGTAACA
GCAGTGGAGGGCGGCAGTAGCGGCGGAGGGAATGAATATGCATATCAAGCCGTCGTGAAGATCGGCGGCCATGTTTTTAAAGGTTATTTGTACGACCATGGAGTAGAAGC
TAGAGATGGGTTTCCGACGATGTCGAATTTGCATCTTGGAGATGGCGGTTCAACTTCGTCACCGGTCATTGATCCTTCTGATGTTTACGGCAGCTCCGCCACCCGCGGTG
GGGGACTGGCTGGGGGCTCTGGCTATGGAAATTCCATAAATTGA
mRNA sequenceShow/hide mRNA sequence
GTTTCTTCAAATTCATTCACAAACCAAATTCATCCTCTCTCAATTTCTCAATTCTCCTTCTCTCAAGATTACCAAATAATAAATAACATTTCATAGATCCATGTTGCTTC
ATCAGTAAACCTTAGATCAAATTTAGATCTTTTTTTATATTAAAAAAAATCAATTTAGGGTTTTTGTTCCTCTCTGCCAGAGATTCACCAGCTGTGGCTGCCGCACGCCG
TCTTCCTTCCGATTCCGGTGCCTTCGCCGACTGGGTGGCTCCTCCCTCTGCCATCGTCGCCGATGAACTCTCCCTCGGTTTCAATTCTGCCTCCTCCATTCCATCACCCC
GGATGTGGCCCTCATCCAGACCCCTCACTATCGGTTATAACCACACGCCGGCGCCGACGCCGGATATGGTGGGTCTCATGGCCTCAGGCTTCGGAGTCGGCGTTAGCGTT
TTGCCTCTCCTTACCGGCCTCGCGCCGTCAAGTGTAGGAATTGAAGAAGCTAACTTAATGATCAGCCGTGGCGGCGGCGGCGATGAAGGTGGGGGGGGAATTCAATTCAA
TGGGAATAATTTAGATGGGTTTGGGATTTTGGGAGGTGGGTCGAGTTTGAATTCGGGCGTCGGAACTTGCCATGATTGTGGGAACCAAGCCAAGAAAGATTGTAGTCACC
GGCGGTGCCGGAGCTGCTGTAAAAGCCGTGGATTTGATTGTTCAACTCACGTGAAAAGCACGTGGGTGCCGGCAGCTAGAAGGAGAGAACGTCAGATGATGGGTGCGGCG
TCGGATGCAGCGGCCGGCGGGACATCGTCGGGGTCTACGTCCGGCGGGAAGAAGCCGAGGTTGATTGCTTCACAGACGACTACTAATTCTCATACTTCCACTTCAAATAC
TCCAACACCAAGCTTTGACGCTTCCTCAGCCGCTGATATGAGTAGTAAAAAGGCAAAAAAGCTGCCGGAACAAATCCGAGCGCCGGCGGTGTTCAAATGCGTCCGGGTAA
CAGCAGTGGAGGGCGGCAGTAGCGGCGGAGGGAATGAATATGCATATCAAGCCGTCGTGAAGATCGGCGGCCATGTTTTTAAAGGTTATTTGTACGACCATGGAGTAGAA
GCTAGAGATGGGTTTCCGACGATGTCGAATTTGCATCTTGGAGATGGCGGTTCAACTTCGTCACCGGTCATTGATCCTTCTGATGTTTACGGCAGCTCCGCCACCCGCGG
TGGGGGACTGGCTGGGGGCTCTGGCTATGGAAATTCCATAAATTGATCCATATTGTTTAAACATTTTAATTTCAATGTTTGGTTTATAGCTTTTGAATTTGTTTAGTGGA
AAAATAAGGAATAGAAGAGAAGCCCTTACTTTATGCATGGTTTATTTTTATTTGTATATTTATATTGCTTACAAATATAAATATATTCTATTAATATTTCA
Protein sequenceShow/hide protein sequence
MWPSSRPLTIGYNHTPAPTPDMVGLMASGFGVGVSVLPLLTGLAPSSVGIEEANLMISRGGGGDEGGGGIQFNGNNLDGFGILGGGSSLNSGVGTCHDCGNQAKKDCSHR
RCRSCCKSRGFDCSTHVKSTWVPAARRRERQMMGAASDAAAGGTSSGSTSGGKKPRLIASQTTTNSHTSTSNTPTPSFDASSAADMSSKKAKKLPEQIRAPAVFKCVRVT
AVEGGSSGGGNEYAYQAVVKIGGHVFKGYLYDHGVEARDGFPTMSNLHLGDGGSTSSPVIDPSDVYGSSATRGGGLAGGSGYGNSIN