; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0025378 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025378
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr02:7538373..7538540
RNA-Seq ExpressionIVF0025378
SyntenyIVF0025378
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054051.1 retrotransposon protein [Cucumis melo var. makuwa]5.13e-2987.27Show/hide
Query:  MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQLRNA
        MTYCDD+DDVDEGD AYATTT  E+IHYIE TNEWSQWRD+LAESMFTDWQLRNA
Subjt:  MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQLRNA

KAA0055933.1 retrotransposon protein [Cucumis melo var. makuwa]8.00e-28100Show/hide
Query:  MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQL
        MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQL
Subjt:  MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQL

KAA0066137.1 retrotransposon protein [Cucumis melo var. makuwa]5.43e-2990.91Show/hide
Query:  MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQLRNA
        MTYCD+VDDVDEGD AYATTTTIE+IHYIEMTNEWSQW +KLAESMFTDWQLRNA
Subjt:  MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQLRNA

TYK28139.1 retrotransposon protein [Cucumis melo var. makuwa]5.30e-30100Show/hide
Query:  MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQL
        MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQL
Subjt:  MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQL

XP_008450472.1 PREDICTED: uncharacterized protein LOC103492066 [Cucumis melo]2.57e-32100Show/hide
Query:  MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQLRNA
        MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQLRNA
Subjt:  MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQLRNA

TrEMBL top hitse value%identityAlignment
A0A1S3BNP1 uncharacterized protein LOC1034920662.8e-24100Show/hide
Query:  MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQLRNA
        MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQLRNA
Subjt:  MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQLRNA

A0A5A7UJ27 Retrotransposon protein2.0e-22100Show/hide
Query:  MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQL
        MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQL
Subjt:  MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQL

A0A5A7VGD3 Retrotransposon protein2.2e-2190.91Show/hide
Query:  MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQLRNA
        MTYCD+VDDVDEGD AYATTTTIE+IHYIEMTNEWSQW +KLAESMFTDWQLRNA
Subjt:  MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQLRNA

A0A5D3BDZ0 Retrotransposon protein1.9e-2087.27Show/hide
Query:  MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQLRNA
        MTYCDD+DDVDEGD AYATTT  E+IHYIE TNEWSQWRD+LAESMFTDWQLRNA
Subjt:  MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQLRNA

A0A5D3DXP6 Retrotransposon protein2.0e-22100Show/hide
Query:  MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQL
        MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQL
Subjt:  MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGTGATGACGTTGATGACGTGGACGAGGGGGACTTCGCGTACGCGACGACCACCACTATAGAAGAAATTCACTACATTGAGATGACAAACGAGTGGTCTCA
GTGGCGCGACAAACTAGCTGAATCGATGTTCACAGACTGGCAGTTACGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGTGATGACGTTGATGACGTGGACGAGGGGGACTTCGCGTACGCGACGACCACCACTATAGAAGAAATTCACTACATTGAGATGACAAACGAGTGGTCTCA
GTGGCGCGACAAACTAGCTGAATCGATGTTCACAGACTGGCAGTTACGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYCDDVDDVDEGDFAYATTTTIEEIHYIEMTNEWSQWRDKLAESMFTDWQLRNA