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IVF0025381 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025381
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptioncytochrome c6, chloroplastic
Genome locationchr08:133278..135702
RNA-Seq ExpressionIVF0025381
SyntenyIVF0025381
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0005506 - iron ion binding (molecular function)
GO:0009055 - electron transfer activity (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR009056 - Cytochrome c-like domain
IPR023655 - Cytochrome c6
IPR036909 - Cytochrome c-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134523.1 cytochrome c6, chloroplastic [Cucumis sativus]5.83e-10488.76Show/hide
Query:  MQLLSVTSDFVGPISSPHSFPLNGNRRTIVCQIRTHVKILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATL
        M LLSVTS FV P +SP+ FP  G RRT VCQIRT VKIL+ L PPLIALLLPLSPLNKT GCLVLAET EIERGGALFNQ+CIGCHDGGGNIIQPGATL
Subjt:  MQLLSVTSDFVGPISSPHSFPLNGNRRTIVCQIRTHVKILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATL

Query:  FSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        FSSDLERNGADAEEEIYRITY GKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
Subjt:  FSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

XP_008439440.1 PREDICTED: cytochrome c6, chloroplastic [Cucumis melo]9.84e-123100Show/hide
Query:  MQLLSVTSDFVGPISSPHSFPLNGNRRTIVCQIRTHVKILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATL
        MQLLSVTSDFVGPISSPHSFPLNGNRRTIVCQIRTHVKILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATL
Subjt:  MQLLSVTSDFVGPISSPHSFPLNGNRRTIVCQIRTHVKILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATL

Query:  FSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        FSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
Subjt:  FSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

XP_022926876.1 cytochrome c6, chloroplastic [Cucurbita moschata]5.22e-9781.66Show/hide
Query:  MQLLSVTSDFVGPISSPHSFPLNGNRRTIVCQIRTHVKILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATL
        M+ LSVTSDF     SPH FPL   RRT VCQ+R  VKIL+TLAPPLIA+L+ L PLNKTPGC  LA++ EIERGGALF+ ACIGCHD GGNIIQPGATL
Subjt:  MQLLSVTSDFVGPISSPHSFPLNGNRRTIVCQIRTHVKILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATL

Query:  FSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        FSSDLERNGAD+EEEIY+ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVKIQADRGWPNP
Subjt:  FSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

XP_023517564.1 cytochrome c6, chloroplastic [Cucurbita pepo subsp. pepo]4.29e-9681.07Show/hide
Query:  MQLLSVTSDFVGPISSPHSFPLNGNRRTIVCQIRTHVKILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATL
        M+ LSVTSDF     SPH FPL   RRT VCQ+R  V IL+TLAPPLIA+L+ L PLNKTPGC  LA++ EIERGGALF+ ACIGCHD GGNIIQPGATL
Subjt:  MQLLSVTSDFVGPISSPHSFPLNGNRRTIVCQIRTHVKILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATL

Query:  FSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        FSSDLERNGAD+EEEIY+ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVKIQADRGWPNP
Subjt:  FSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

XP_038877732.1 cytochrome c6, chloroplastic [Benincasa hispida]1.70e-10285.21Show/hide
Query:  MQLLSVTSDFVGPISSPHSFPLNGNRRTIVCQIRTHVKILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATL
        M LLS TS+F     +PH FPL   RRT+VCQIRT VKIL +LAPPLIA+ L LSPLN+TPGCL LA+T EIERGGALFNQACIGCHDGGGNIIQPGATL
Subjt:  MQLLSVTSDFVGPISSPHSFPLNGNRRTIVCQIRTHVKILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATL

Query:  FSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        FSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVK+QADRGWPNP
Subjt:  FSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

TrEMBL top hitse value%identityAlignment
A0A0A0KPD1 Cytochrome c domain-containing protein6.9e-7492.57Show/hide
Query:  LNGNRRTIVCQIRTHVKILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITY
        L+G RRT VCQIRT VKIL+ L PPLIALLLPLSPLNKT GCLVLAET EIERGGALFNQ+CIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITY
Subjt:  LNGNRRTIVCQIRTHVKILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITY

Query:  YGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
         GKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
Subjt:  YGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

A0A1S3AYD3 cytochrome c6, chloroplastic2.7e-94100Show/hide
Query:  MQLLSVTSDFVGPISSPHSFPLNGNRRTIVCQIRTHVKILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATL
        MQLLSVTSDFVGPISSPHSFPLNGNRRTIVCQIRTHVKILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATL
Subjt:  MQLLSVTSDFVGPISSPHSFPLNGNRRTIVCQIRTHVKILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATL

Query:  FSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        FSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
Subjt:  FSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

A0A6J1CXZ2 cytochrome c6, chloroplastic1.8e-6677.06Show/hide
Query:  MQLLSVTSDFVGPISSPHSFPLNGNRRTIVCQIR-THVKILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGAT
        M LLS  SDF   I+S H F + G R T VCQ R   +KI ++ APPLIA+L+ LSP+ KTPGC  LA+T EIERGGALF+Q+CIGCHDGGGNIIQPGAT
Subjt:  MQLLSVTSDFVGPISSPHSFPLNGNRRTIVCQIR-THVKILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGAT

Query:  LFSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        LFSSDLERNGAD EEEIY ITYYGKGRMPGFGENCKPRGQCTFGPRLQE+EIRLLAKFVKIQADRGW NP
Subjt:  LFSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

A0A6J1EG38 cytochrome c6, chloroplastic1.1e-7481.66Show/hide
Query:  MQLLSVTSDFVGPISSPHSFPLNGNRRTIVCQIRTHVKILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATL
        M+ LSVTSDF     SPH FPL   RRT VCQ+R  VKIL+TLAPPLIA+L+ L PLNKTPGC  LA++ EIERGGALF+ ACIGCHD GGNIIQPGATL
Subjt:  MQLLSVTSDFVGPISSPHSFPLNGNRRTIVCQIRTHVKILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATL

Query:  FSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        FSSDLERNGAD+EEEIY+ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVKIQADRGWPNP
Subjt:  FSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

A0A6J1KPJ4 cytochrome c6, chloroplastic9.9e-7379.88Show/hide
Query:  MQLLSVTSDFVGPISSPHSFPLNGNRRTIVCQIRTHVKILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATL
        M+LLSV SDF     SPH F L   RRT VC++R  VK L+ LAPPLIA+L+ L PLNKTPGC  LA++ EIERGGALF+ ACIGCHDGGGNIIQPGATL
Subjt:  MQLLSVTSDFVGPISSPHSFPLNGNRRTIVCQIRTHVKILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATL

Query:  FSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP
        FSSDLERNGAD+EEEIY+ITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIR+LAKFVKIQADRGWPNP
Subjt:  FSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP

SwissProt top hitse value%identityAlignment
P00110 Cytochrome c61.2e-0937.11Show/hide
Query:  EIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADAEEEI-YRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGW
        +IE G  +F   C  CH GG N+I P  TL    LE NG +A   I Y++T  GK  MP             FG RL + +I  +A +V  Q+++GW
Subjt:  EIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADAEEEI-YRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGW

P00114 Cytochrome c67.5e-0932.29Show/hide
Query:  EIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGW
        ++  G  +F+  C  CH GGGN++    TL    LE+ G ++E+ I     +GK  MP             F  RL +E+I+ +A +V  QA +GW
Subjt:  EIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGW

P07497 Cytochrome c63.0e-1030.23Show/hide
Query:  KILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPR
        +IL T    L+ LL  ++P          A+  ++  GG +F+  C  CH GG N++ P  TL  +DL++ G  + E I      GKG MP FG      
Subjt:  KILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPR

Query:  GQCTFGPRLQEEEIRLLAKFVKIQADRGW
               +L  ++I  +A +V  Q+++GW
Subjt:  GQCTFGPRLQEEEIRLLAKFVKIQADRGW

P25935 Cytochrome c63.0e-1030.23Show/hide
Query:  KILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPR
        +IL T    L+ LL  ++P          A+  ++  GG +F+  C  CH GG N++ P  TL  +DL++ G  + E I      GKG MP FG      
Subjt:  KILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPR

Query:  GQCTFGPRLQEEEIRLLAKFVKIQADRGW
               +L  ++I  +A +V  Q+++GW
Subjt:  GQCTFGPRLQEEEIRLLAKFVKIQADRGW

Q93VA3 Cytochrome c6, chloroplastic1.8e-5071.32Show/hide
Query:  ILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRG
        +L+ LAPPL A+LL +SP+   P    L +T +I+RG  LFN+ACIGCHD GGNIIQPGATLF+ DLERNG D EEEIYR+TY+GKGRMPGFGE C PRG
Subjt:  ILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRG

Query:  QCTFGPRLQEEEIRLLAKFVKIQADRGWP
        QCTFGPRLQ+EEI+LLA+FVK QAD+GWP
Subjt:  QCTFGPRLQEEEIRLLAKFVKIQADRGWP

Arabidopsis top hitse value%identityAlignment
AT5G45040.1 Cytochrome c1.2e-5171.32Show/hide
Query:  ILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRG
        +L+ LAPPL A+LL +SP+   P    L +T +I+RG  LFN+ACIGCHD GGNIIQPGATLF+ DLERNG D EEEIYR+TY+GKGRMPGFGE C PRG
Subjt:  ILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGADAEEEIYRITYYGKGRMPGFGENCKPRG

Query:  QCTFGPRLQEEEIRLLAKFVKIQADRGWP
        QCTFGPRLQ+EEI+LLA+FVK QAD+GWP
Subjt:  QCTFGPRLQEEEIRLLAKFVKIQADRGWP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACTTCTCTCCGTAACTTCAGATTTTGTTGGGCCTATCAGTAGCCCTCATTCCTTCCCACTAAATGGAAACCGACGGACCATAGTTTGTCAAATTCGTACACACGT
TAAGATTCTTCAGACCTTGGCTCCCCCTTTGATTGCGCTGCTTCTACCATTATCCCCCCTCAACAAAACCCCAGGATGTCTTGTGCTCGCCGAAACGACAGAAATAGAAA
GAGGAGGTGCATTGTTTAATCAAGCTTGCATTGGCTGCCATGATGGAGGGGGAAACATAATTCAGCCCGGTGCCACACTCTTTTCAAGTGATCTCGAAAGAAATGGAGCT
GATGCCGAAGAGGAGATCTACCGTATTACATATTATGGGAAAGGAAGAATGCCTGGTTTTGGTGAGAACTGTAAACCAAGGGGTCAGTGCACATTTGGTCCACGTTTGCA
GGAGGAAGAAATTAGGCTTCTGGCGAAATTTGTAAAGATACAGGCAGATCGGGGGTGGCCAAACCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGCAACTTCTCTCCGTAACTTCAGATTTTGTTGGGCCTATCAGTAGCCCTCATTCCTTCCCACTAAATGGAAACCGACGGACCATAGTTTGTCAAATTCGTACACACGT
TAAGATTCTTCAGACCTTGGCTCCCCCTTTGATTGCGCTGCTTCTACCATTATCCCCCCTCAACAAAACCCCAGGATGTCTTGTGCTCGCCGAAACGACAGAAATAGAAA
GAGGAGGTGCATTGTTTAATCAAGCTTGCATTGGCTGCCATGATGGAGGGGGAAACATAATTCAGCCCGGTGCCACACTCTTTTCAAGTGATCTCGAAAGAAATGGAGCT
GATGCCGAAGAGGAGATCTACCGTATTACATATTATGGGAAAGGAAGAATGCCTGGTTTTGGTGAGAACTGTAAACCAAGGGGTCAGTGCACATTTGGTCCACGTTTGCA
GGAGGAAGAAATTAGGCTTCTGGCGAAATTTGTAAAGATACAGGCAGATCGGGGGTGGCCAAACCCATAG
Protein sequenceShow/hide protein sequence
MQLLSVTSDFVGPISSPHSFPLNGNRRTIVCQIRTHVKILQTLAPPLIALLLPLSPLNKTPGCLVLAETTEIERGGALFNQACIGCHDGGGNIIQPGATLFSSDLERNGA
DAEEEIYRITYYGKGRMPGFGENCKPRGQCTFGPRLQEEEIRLLAKFVKIQADRGWPNP