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IVF0025383 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025383
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr02:16999825..17000022
RNA-Seq ExpressionIVF0025383
SyntenyIVF0025383
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054460.1 retrotransposon protein [Cucumis melo var. makuwa]1.32e-2786.15Show/hide
Query:  MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQANE
        M D NE FPPVYSQGIDLSQ DV ASRPSR SKGRTGSSGSKRKRGSQR+ DVEAIHLALDQ NE
Subjt:  MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQANE
KAA0062570.1 retrotransposon protein [Cucumis melo var. makuwa]1.44e-36100Show/hide
Query:  MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQANE
        MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQANE
Subjt:  MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQANE
TYJ99310.1 retrotransposon protein [Cucumis melo var. makuwa]1.74e-2784.62Show/hide
Query:  MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQANE
        M D NE+FPPVYSQGIDLSQ DV ASRPSR S+GRTGSSGSKRKRGSQR+ DVEAIHLALDQ NE
Subjt:  MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQANE
TYK28790.1 retrotransposon protein [Cucumis melo var. makuwa]1.26e-33100Show/hide
Query:  MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQANE
        MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQANE
Subjt:  MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQANE
TYK29656.1 retrotransposon protein [Cucumis melo var. makuwa]3.54e-2987.5Show/hide
Query:  MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQAN
        M D+NEEFPPVYSQGIDLSQ DVHASRPSR S+GRT SSGSKRKRGSQREVDVE IHLALDQ N
Subjt:  MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQAN
TrEMBL top hitse value%identityAlignment
A0A5A7U8I3 Retrotransposon protein4.4e-2186.15Show/hide
Query:  MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQANE
        M D+NEEFPPVYSQGIDLSQ DV ASRPSR S+GRTGSSGSKRKRGSQR+ DVEAIHLALDQ NE
Subjt:  MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQANE
A0A5A7V5R4 Retrotransposon protein1.2e-26100Show/hide
Query:  MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQANE
        MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQANE
Subjt:  MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQANE
A0A5D3C8P0 Retrotransposon protein4.4e-2186.15Show/hide
Query:  MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQANE
        M D+NEEFPPVYSQGIDLSQ DV ASRPSR S+GRTGSSGSKRKRGSQR+ DVEAIHLALDQ NE
Subjt:  MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQANE
A0A5D3DZW5 Retrotransposon protein1.2e-26100Show/hide
Query:  MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQANE
        MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQANE
Subjt:  MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQANE
A0A5D3E168 Retrotransposon protein2.6e-2187.5Show/hide
Query:  MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQAN
        M D+NEEFPPVYSQGIDLSQ DVHASRPSR S+GRT SSGSKRKRGSQREVDVE IHLALDQ N
Subjt:  MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQAN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATAAAAACGAGGAGTTCCCGCCCGTGTACAGCCAGGGGATTGACCTGTCGCAACACGATGTACACGCCTCACGACCTTCTCGCGGTTCAAAAGGTAGGACCGG
ATCAAGTGGATCCAAAAGGAAGAGGGGAAGTCAAAGAGAGGTGGATGTTGAAGCCATACATTTGGCGCTCGACCAAGCAAACGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGATAAAAACGAGGAGTTCCCGCCCGTGTACAGCCAGGGGATTGACCTGTCGCAACACGATGTACACGCCTCACGACCTTCTCGCGGTTCAAAAGGTAGGACCGG
ATCAAGTGGATCCAAAAGGAAGAGGGGAAGTCAAAGAGAGGTGGATGTTGAAGCCATACATTTGGCGCTCGACCAAGCAAACGAGTAA
Protein sequenceShow/hide protein sequence
MADKNEEFPPVYSQGIDLSQHDVHASRPSRGSKGRTGSSGSKRKRGSQREVDVEAIHLALDQANE