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IVF0025390 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025390
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr04:6836189..6836620
RNA-Seq ExpressionIVF0025390
SyntenyIVF0025390
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039550.1 uncharacterized protein E6C27_scaffold744G00190 [Cucumis melo var. makuwa]1.10e-5368.89Show/hide
Query:  MSEEETIFYYNERVLEIANESFILRERIPKSKIVCKMLQSLLSKFDMKVTAIEEAHDITKLKLDELFGSLTTFEMVISNRDDKKGKGVAFKTVYKEETLD
        MSE+E++  YN+RVL+I+NES +  E+IPKSKIV K+L+SLL KFDMKVT IEEAH+ITKLKL ELFGSL TFEM IS+R+DK GKG+AFK++YKEET  
Subjt:  MSEEETIFYYNERVLEIANESFILRERIPKSKIVCKMLQSLLSKFDMKVTAIEEAHDITKLKLDELFGSLTTFEMVISNRDDKKGKGVAFKTVYKEETLD

Query:  HKTTNEVNVNESIALPTKQSSKVVKKFINMNTTGA
        +++ N  NVNESIAL TKQ SKVVKKF  +NTTG+
Subjt:  HKTTNEVNVNESIALPTKQSSKVVKKFINMNTTGA

KAA0048271.1 Receptor-like protein 12 [Cucumis melo var. makuwa]2.96e-5470.37Show/hide
Query:  MSEEETIFYYNERVLEIANESFILRERIPKSKIVCKMLQSLLSKFDMKVTAIEEAHDITKLKLDELFGSLTTFEMVISNRDDKKGKGVAFKTVYKEETLD
        MSE+E++  YNERVLEIANES +L E+IP+SKIV KML+SLL KFDMKVTAIEEAHDITKLKLDELF SL +FE+ ISNR++KKGK VAFK+VY+EE+  
Subjt:  MSEEETIFYYNERVLEIANESFILRERIPKSKIVCKMLQSLLSKFDMKVTAIEEAHDITKLKLDELFGSLTTFEMVISNRDDKKGKGVAFKTVYKEETLD

Query:  HKTTNEVNVNESIALPTKQSSKVVKKFINMNTTGA
        +K+ ++ NVN+SIAL TKQ SK+VKKF NMN  G+
Subjt:  HKTTNEVNVNESIALPTKQSSKVVKKFINMNTTGA

KAA0052069.1 gag-pol polyprotein [Cucumis melo var. makuwa]6.33e-5772.59Show/hide
Query:  MSEEETIFYYNERVLEIANESFILRERIPKSKIVCKMLQSLLSKFDMKVTAIEEAHDITKLKLDELFGSLTTFEMVISNRDDKKGKGVAFKTVYKEETLD
        MSE+E++  YNERVLEIANES +L E+IPKSKIV K+LQSL  KFDMKVTAIEEAHDITKLKLDELFGSL TFE+ IS+++DKKGKG+AFK +Y+EET  
Subjt:  MSEEETIFYYNERVLEIANESFILRERIPKSKIVCKMLQSLLSKFDMKVTAIEEAHDITKLKLDELFGSLTTFEMVISNRDDKKGKGVAFKTVYKEETLD

Query:  HKTTNEVNVNESIALPTKQSSKVVKKFINMNTTGA
        + + N  N+NESIAL TKQ SKVVKKF N+NTTG+
Subjt:  HKTTNEVNVNESIALPTKQSSKVVKKFINMNTTGA

TYJ98757.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]2.94e-6780.42Show/hide
Query:  MSEEETIFYYNERVLEIANESFILRERIPKSKIVCKMLQSLLSKFDMKVTAIEEAHDITKLKLDELFGSLTTFEMVISNRDDKKGKGVAFKTVYKEETLD
        M EEE +  YNERVLEIANESF L ERI +S IVCK+L SL  KFDMKVTAIEEAHDI KLKL+ELFGSLTTFEM  S +DDKKGKGVAFKTVY+EET +
Subjt:  MSEEETIFYYNERVLEIANESFILRERIPKSKIVCKMLQSLLSKFDMKVTAIEEAHDITKLKLDELFGSLTTFEMVISNRDDKKGKGVAFKTVYKEETLD

Query:  HKTTNEVNVNESIALPTKQSSKVVKKFINMNTTGARVIEQNSF
        H TTNEVNVNESIAL TKQ SKVVKKFINMNTTGA V EQNSF
Subjt:  HKTTNEVNVNESIALPTKQSSKVVKKFINMNTTGARVIEQNSF

TYK30726.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]3.26e-5463.64Show/hide
Query:  MSEEETIFYYNERVLEIANESFILRERIPKSKIVCKMLQSLLSKFDMKVTAIEEAHDITKLKLDELFGSLTTFEMVISNRDDKKGKGVAFKTVYKEETLD
        M++ E +  YNERVLEIANES +L E++P+SKIVCK+L+SL  KFDMKVTAIEEAH+IT LKLDELF SL TFEM IS+R+ KKGKG+AFK++Y+++T  
Subjt:  MSEEETIFYYNERVLEIANESFILRERIPKSKIVCKMLQSLLSKFDMKVTAIEEAHDITKLKLDELFGSLTTFEMVISNRDDKKGKGVAFKTVYKEETLD

Query:  HKTTNEVNVNESIALPTKQSSKVVKKFINMNTTGARVIEQNSF
        +++ NE NV+ESIAL TKQ SKV++KF NMN TG+     N F
Subjt:  HKTTNEVNVNESIALPTKQSSKVVKKFINMNTTGARVIEQNSF

TrEMBL top hitse value%identityAlignment
A0A5A7T8I2 CCHC-type domain-containing protein2.9e-4168.89Show/hide
Query:  MSEEETIFYYNERVLEIANESFILRERIPKSKIVCKMLQSLLSKFDMKVTAIEEAHDITKLKLDELFGSLTTFEMVISNRDDKKGKGVAFKTVYKEETLD
        MSE+E++  YN+RVL+I+NES +  E+IPKSKIV K+L+SLL KFDMKVT IEEAH+ITKLKL ELFGSL TFEM IS+R+DK GKG+AFK++YKEET  
Subjt:  MSEEETIFYYNERVLEIANESFILRERIPKSKIVCKMLQSLLSKFDMKVTAIEEAHDITKLKLDELFGSLTTFEMVISNRDDKKGKGVAFKTVYKEETLD

Query:  HKTTNEVNVNESIALPTKQSSKVVKKFINMNTTGA
        +++ N  NVNESIAL TKQ SKVVKKF  +NTTG+
Subjt:  HKTTNEVNVNESIALPTKQSSKVVKKFINMNTTGA

A0A5A7U3Y3 Receptor-like protein 121.3e-4170.37Show/hide
Query:  MSEEETIFYYNERVLEIANESFILRERIPKSKIVCKMLQSLLSKFDMKVTAIEEAHDITKLKLDELFGSLTTFEMVISNRDDKKGKGVAFKTVYKEETLD
        MSE+E++  YNERVLEIANES +L E+IP+SKIV KML+SLL KFDMKVTAIEEAHDITKLKLDELF SL +FE+ ISNR++KKGK VAFK+VY+EE+  
Subjt:  MSEEETIFYYNERVLEIANESFILRERIPKSKIVCKMLQSLLSKFDMKVTAIEEAHDITKLKLDELFGSLTTFEMVISNRDDKKGKGVAFKTVYKEETLD

Query:  HKTTNEVNVNESIALPTKQSSKVVKKFINMNTTGA
        +K+ ++ NVN+SIAL TKQ SK+VKKF NMN  G+
Subjt:  HKTTNEVNVNESIALPTKQSSKVVKKFINMNTTGA

A0A5D3BI07 Gag-proteinase polyprotein5.3e-5180.42Show/hide
Query:  MSEEETIFYYNERVLEIANESFILRERIPKSKIVCKMLQSLLSKFDMKVTAIEEAHDITKLKLDELFGSLTTFEMVISNRDDKKGKGVAFKTVYKEETLD
        M EEE +  YNERVLEIANESF L ERI +S IVCK+L SL  KFDMKVTAIEEAHDI KLKL+ELFGSLTTFEM  S +DDKKGKGVAFKTVY+EET +
Subjt:  MSEEETIFYYNERVLEIANESFILRERIPKSKIVCKMLQSLLSKFDMKVTAIEEAHDITKLKLDELFGSLTTFEMVISNRDDKKGKGVAFKTVYKEETLD

Query:  HKTTNEVNVNESIALPTKQSSKVVKKFINMNTTGARVIEQNSF
        H TTNEVNVNESIAL TKQ SKVVKKFINMNTTGA V EQNSF
Subjt:  HKTTNEVNVNESIALPTKQSSKVVKKFINMNTTGARVIEQNSF

A0A5D3BN48 Gag-pol polyprotein8.2e-4472.59Show/hide
Query:  MSEEETIFYYNERVLEIANESFILRERIPKSKIVCKMLQSLLSKFDMKVTAIEEAHDITKLKLDELFGSLTTFEMVISNRDDKKGKGVAFKTVYKEETLD
        MSE+E++  YNERVLEIANES +L E+IPKSKIV K+LQSL  KFDMKVTAIEEAHDITKLKLDELFGSL TFE+ IS+++DKKGKG+AFK +Y+EET  
Subjt:  MSEEETIFYYNERVLEIANESFILRERIPKSKIVCKMLQSLLSKFDMKVTAIEEAHDITKLKLDELFGSLTTFEMVISNRDDKKGKGVAFKTVYKEETLD

Query:  HKTTNEVNVNESIALPTKQSSKVVKKFINMNTTGA
        + + N  N+NESIAL TKQ SKVVKKF N+NTTG+
Subjt:  HKTTNEVNVNESIALPTKQSSKVVKKFINMNTTGA

A0A5D3E0I8 Gag-pol polyprotein2.9e-4165.73Show/hide
Query:  MSEEETIFYYNERVLEIANESFILRERIPKSKIVCKMLQSLLSKFDMKVTAIEEAHDITKLKLDELFGSLTTFEMVISNRDDKKGKGVAFKTVYKEETLD
        MSE+E++F YNERVLEIANES +L E+IP SKIV K+LQSL  KFD KVTAIE+AHDIT LKLDELFGSL TFEM IS+R++KKGK +AFK+ Y+EE + 
Subjt:  MSEEETIFYYNERVLEIANESFILRERIPKSKIVCKMLQSLLSKFDMKVTAIEEAHDITKLKLDELFGSLTTFEMVISNRDDKKGKGVAFKTVYKEETLD

Query:  HKTTNEVNVNESIALPTKQSSKVVKKFINMNTTGARVIEQNSF
        + + NEVN++ESIAL TKQ SKV ++F NMNTTG      N +
Subjt:  HKTTNEVNVNESIALPTKQSSKVVKKFINMNTTGARVIEQNSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGAAGAAGAGACTATTTTTTACTATAATGAGAGAGTTCTCGAAATTGCAAATGAGTCTTTTATTCTTAGAGAGAGGATTCCTAAGTCAAAGATAGTATGTAAAAT
GTTACAATCTTTGCTTAGTAAGTTTGATATGAAGGTAACTGCTATAGAGGAAGCGCATGACATTACTAAATTAAAATTAGATGAACTTTTTGGATCTCTAACTACTTTTG
AGATGGTCATATCAAACAGAGATGATAAGAAAGGAAAGGGTGTTGCTTTCAAAACTGTGTATAAGGAAGAAACACTTGATCACAAGACCACAAATGAGGTTAATGTAAAT
GAATCTATTGCTCTGCCGACAAAACAATCCTCTAAAGTTGTCAAGAAATTCATAAATATGAACACCACCGGAGCTAGAGTTATAGAACAAAACTCATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGAAGAAGAGACTATTTTTTACTATAATGAGAGAGTTCTCGAAATTGCAAATGAGTCTTTTATTCTTAGAGAGAGGATTCCTAAGTCAAAGATAGTATGTAAAAT
GTTACAATCTTTGCTTAGTAAGTTTGATATGAAGGTAACTGCTATAGAGGAAGCGCATGACATTACTAAATTAAAATTAGATGAACTTTTTGGATCTCTAACTACTTTTG
AGATGGTCATATCAAACAGAGATGATAAGAAAGGAAAGGGTGTTGCTTTCAAAACTGTGTATAAGGAAGAAACACTTGATCACAAGACCACAAATGAGGTTAATGTAAAT
GAATCTATTGCTCTGCCGACAAAACAATCCTCTAAAGTTGTCAAGAAATTCATAAATATGAACACCACCGGAGCTAGAGTTATAGAACAAAACTCATTTTGA
Protein sequenceShow/hide protein sequence
MSEEETIFYYNERVLEIANESFILRERIPKSKIVCKMLQSLLSKFDMKVTAIEEAHDITKLKLDELFGSLTTFEMVISNRDDKKGKGVAFKTVYKEETLDHKTTNEVNVN
ESIALPTKQSSKVVKKFINMNTTGARVIEQNSF