CuGenDBv2

Gene ID	IVF0025425
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Reverse transcriptase
Genome location	chr06:12477313..12483182
RNA-Seq Expression	IVF0025425
Synteny	IVF0025425
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:0008270 - zinc ion binding (molecular function) GO:0008194 - UDP-glycosyltransferase activity (molecular function) GO:0004519 - endonuclease activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR043502 - DNA/RNA polymerase superfamily IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR041588 - Integrase zinc-binding domain IPR041373 - Reverse transcriptase, RNase H-like domain IPR036397 - Ribonuclease H superfamily IPR012337 - Ribonuclease H-like superfamily IPR001584 - Integrase, catalytic core IPR000477 - Reverse transcriptase domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025998.1 pol protein [Cucumis melo var. makuwa]

0.0

77.86

Show/hide

Query:  MDWLSTNHASIDCFGKEVVFNPLSGPSFKFRGAGIVCIPKVISGMKASKLLNQGTWGILASVVDTREPEVSLSSKPVVREYPDVFSDELLGLPPPREIDF
        MDWLS NHA+IDCFGKEVVFNP SG SFKFRGAG+VCIPKVIS MKASKLL+QGTWGILASVVD REPEVSLSS+PVVREYPDVF DEL GLPPPRE+DF
Subjt:  MDWLSTNHASIDCFGKEVVFNPLSGPSFKFRGAGIVCIPKVISGMKASKLLNQGTWGILASVVDTREPEVSLSSKPVVREYPDVFSDELLGLPPPREIDF

Query:  AIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKID
        AIEL+  TAPISRAPY+MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT KNRYPLPRIDDLFDQLQGATVFSKID
Subjt:  AIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKID

Query:  LRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMVFKDFLDS-------------------------------------------
        LRSGYHQLRIRD DIPKTAFRSRY HY+++VMSFGLTNAPA+FMDLMN VFKDFLDS                                           
Subjt:  LRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMVFKDFLDS-------------------------------------------

Query:  ---------------------------------------------------RFVEGFSRIASPLTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMP
                                                           RFVE FSRIASPLTQLTRKGTPFVWSPACE SF+ELKQKLVTAPVLT+P
Subjt:  ---------------------------------------------------RFVEGFSRIASPLTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMP

Query:  DGSRSFVIYSDACKKELGYVLMQQGK--------LKSHEQNYPTHDLELATVVFALNLWRHYLYGEKIQIFTDHKSLKYFLTQKELNMRQRRWLELVKDY
        DGS +FVIYSDA KK LG VLMQQGK        LK HEQNYPTHDLELA VVFAL +WRHYLYGEKIQI+TDHKSLKYF TQKELNMRQRRWLELVKDY
Subjt:  DGSRSFVIYSDACKKELGYVLMQQGK--------LKSHEQNYPTHDLELATVVFALNLWRHYLYGEKIQIFTDHKSLKYFLTQKELNMRQRRWLELVKDY

Query:  DYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEIAVSVGE----------------------LNDPYWVEKRRLVETRQGEDFSISSDDG
        D EILYHP KANVVADALSRKV HSAALITKQ PLLRDFERAEIAVSVGE                      L+DPY  EKRR+VET QGE FSISSDDG
Subjt:  DYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEIAVSVGE----------------------LNDPYWVEKRRLVETRQGEDFSISSDDG

Query:  LMFKGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRN------KKREVADFVSRCLVCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLP
        LMF+GRLCV EDS VK ELLTEAHSSPFTMHPGSTKMYQDLR+       KR+VADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGLP
Subjt:  LMFKGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRN------KKREVADFVSRCLVCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLP

Query:  RTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTSKFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYM
        +TLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDA FTSKFWKGLQ+ALGTRLDFST FHPQT+GQTERLNQ+LE M
Subjt:  RTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTSKFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYM

Query:  LRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE
        LRA VL+F GSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRS VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE
Subjt:  LRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE

KAA0062342.1 pol protein [Cucumis melo var. makuwa]

0.0

77.64

Show/hide

Query:  MDWLSTNHASIDCFGKEVVFNPLSGPSFKFRGAGIVCIPKVISGMKASKLLNQGTWGILASVVDTREPEVSLSSKPVVREYPDVFSDELLGLPPPREIDF
        MDWLS NHA+IDC+GKEVVFNP S  SFKFRGAG+VCIPKVIS MKASKLL+QGTWGILASVVD REPEVSLSS+PVVREYPDVF DEL GLPPPRE+DF
Subjt:  MDWLSTNHASIDCFGKEVVFNPLSGPSFKFRGAGIVCIPKVISGMKASKLLNQGTWGILASVVDTREPEVSLSSKPVVREYPDVFSDELLGLPPPREIDF

Query:  AIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKID
        AIEL+  TAPISRAPY+MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT KNRYPLPRIDDLFDQLQGATVFSKID
Subjt:  AIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKID

Query:  LRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMVFKDFLDS-------------------------------------------
        LRSGYHQLRIRD DIPKTAFRSRY HY+++VMSFGLTNAPA+FMDLMN VFKDFLDS                                           
Subjt:  LRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMVFKDFLDS-------------------------------------------

Query:  ---------------------------------------------------RFVEGFSRIASPLTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMP
                                                           RFVE FSRIASPLTQLTRKGTPFVWSPACE SF+ELKQKLVTAPVLT+P
Subjt:  ---------------------------------------------------RFVEGFSRIASPLTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMP

Query:  DGSRSFVIYSDACKKELGYVLMQQGK--------LKSHEQNYPTHDLELATVVFALNLWRHYLYGEKIQIFTDHKSLKYFLTQKELNMRQRRWLELVKDY
        DGS +FVIYSDA KK LG VLMQQGK        LK HEQNYPTHDLELA VVFAL +WRHYLYGEKIQI+TDHKSLKYF TQKELNMRQRRWLELVKDY
Subjt:  DGSRSFVIYSDACKKELGYVLMQQGK--------LKSHEQNYPTHDLELATVVFALNLWRHYLYGEKIQIFTDHKSLKYFLTQKELNMRQRRWLELVKDY

Query:  DYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEIAVSVGE----------------------LNDPYWVEKRRLVETRQGEDFSISSDDG
        D EILYHP KANVVADALSRKV HSAALITKQ PLLRDFERAEIAVSVGE                      L+DPY  EKRR+VET QGE FSISSDDG
Subjt:  DYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEIAVSVGE----------------------LNDPYWVEKRRLVETRQGEDFSISSDDG

Query:  LMFKGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRN------KKREVADFVSRCLVCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLP
        LMF+GRLCV EDS VK ELLTEAHSSPFTMHPGSTKMYQDLR+       KR+VADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGLP
Subjt:  LMFKGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRN------KKREVADFVSRCLVCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLP

Query:  RTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTSKFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYM
        +TLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDA FTSKFWKGLQ+ALGTRLDFST FHPQT+GQTERLNQ+LE M
Subjt:  RTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTSKFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYM

Query:  LRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE
        LRA VL+F GSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRS VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE
Subjt:  LRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE

TYK01576.1 pol protein [Cucumis melo var. makuwa]

0.0

77.64

Show/hide

Query:  MDWLSTNHASIDCFGKEVVFNPLSGPSFKFRGAGIVCIPKVISGMKASKLLNQGTWGILASVVDTREPEVSLSSKPVVREYPDVFSDELLGLPPPREIDF
        MDWLS NHA+IDC+GKEVVFNP S  SFKFRGAG+VCIPKVIS MKASKLL+QGTWGILASVVD REPEVSLSS+PVVREYPDVF DEL GLPPPRE+DF
Subjt:  MDWLSTNHASIDCFGKEVVFNPLSGPSFKFRGAGIVCIPKVISGMKASKLLNQGTWGILASVVDTREPEVSLSSKPVVREYPDVFSDELLGLPPPREIDF

Query:  AIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKID
        AIEL+  TAPISRAPY+MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT KNRYPLPRIDDLFDQLQGATVFSKID
Subjt:  AIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKID

Query:  LRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMVFKDFLDS-------------------------------------------
        LRSGYHQLRIRD DIPKTAFRSRY HY+++VMSFGLTNAPA+FMDLMN VFKDFLDS                                           
Subjt:  LRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMVFKDFLDS-------------------------------------------

Query:  ---------------------------------------------------RFVEGFSRIASPLTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMP
                                                           RFVE FSRIASPLTQLTRKGTPFVWSPACE SF+ELKQKLVTAPVLT+P
Subjt:  ---------------------------------------------------RFVEGFSRIASPLTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMP

Query:  DGSRSFVIYSDACKKELGYVLMQQGK--------LKSHEQNYPTHDLELATVVFALNLWRHYLYGEKIQIFTDHKSLKYFLTQKELNMRQRRWLELVKDY
        DGS +FVIYSDA KK LG VLMQQGK        LK HEQNYPTHDLELA VVFAL +WRHYLYGEKIQI+TDHKSLKYF TQKELNMRQRRWLELVKDY
Subjt:  DGSRSFVIYSDACKKELGYVLMQQGK--------LKSHEQNYPTHDLELATVVFALNLWRHYLYGEKIQIFTDHKSLKYFLTQKELNMRQRRWLELVKDY

Query:  DYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEIAVSVGE----------------------LNDPYWVEKRRLVETRQGEDFSISSDDG
        D EILYHP KANVVADALSRKV HSAALITKQ PLLRDFERAEIAVSVGE                      L+DPY  EKRR+VET QGE FSISSDDG
Subjt:  DYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEIAVSVGE----------------------LNDPYWVEKRRLVETRQGEDFSISSDDG

Query:  LMFKGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRN------KKREVADFVSRCLVCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLP
        LMF+GRLCV EDS VK ELLTEAHSSPFTMHPGSTKMYQDLR+       KR+VADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGLP
Subjt:  LMFKGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRN------KKREVADFVSRCLVCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLP

Query:  RTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTSKFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYM
        +TLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDA FTSKFWKGLQ+ALGTRLDFST FHPQT+GQTERLNQ+LE M
Subjt:  RTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTSKFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYM

Query:  LRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE
        LRA VL+F GSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRS VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE
Subjt:  LRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE

TYK06888.1 pol protein [Cucumis melo var. makuwa]

0.0

77.64

Show/hide

Query:  MDWLSTNHASIDCFGKEVVFNPLSGPSFKFRGAGIVCIPKVISGMKASKLLNQGTWGILASVVDTREPEVSLSSKPVVREYPDVFSDELLGLPPPREIDF
        MDWLS NHA+IDC+GKEVVFNP S  SFKFRGAG+VCIPKVIS MKASKLL+QGTWGILASVVD REPEVSLSS+PVVREYPDVF DEL GLPPPRE+DF
Subjt:  MDWLSTNHASIDCFGKEVVFNPLSGPSFKFRGAGIVCIPKVISGMKASKLLNQGTWGILASVVDTREPEVSLSSKPVVREYPDVFSDELLGLPPPREIDF

Query:  AIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKID
        AIEL+  TAPISRAPY+MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT KNRYPLPRIDDLFDQLQGATVFSKID
Subjt:  AIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKID

Query:  LRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMVFKDFLDS-------------------------------------------
        LRSGYHQLRIRD DIPKTAFRSRY HY+++VMSFGLTNAPA+FMDLMN VFKDFLDS                                           
Subjt:  LRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMVFKDFLDS-------------------------------------------

Query:  ---------------------------------------------------RFVEGFSRIASPLTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMP
                                                           RFVE FSRIASPLTQLTRKGTPFVWSPACE SF+ELKQKLVTAPVLT+P
Subjt:  ---------------------------------------------------RFVEGFSRIASPLTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMP

Query:  DGSRSFVIYSDACKKELGYVLMQQGK--------LKSHEQNYPTHDLELATVVFALNLWRHYLYGEKIQIFTDHKSLKYFLTQKELNMRQRRWLELVKDY
        DGS +FVIYSDA KK LG VLMQQGK        LK HEQNYPTHDLELA VVFAL +WRHYLYGEKIQI+TDHKSLKYF TQKELNMRQRRWLELVKDY
Subjt:  DGSRSFVIYSDACKKELGYVLMQQGK--------LKSHEQNYPTHDLELATVVFALNLWRHYLYGEKIQIFTDHKSLKYFLTQKELNMRQRRWLELVKDY

Query:  DYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEIAVSVGE----------------------LNDPYWVEKRRLVETRQGEDFSISSDDG
        D EILYHP KANVVADALSRKV HSAALITKQ PLLRDFERAEIAVSVGE                      L+DPY  EKRR+VET QGE FSISSDDG
Subjt:  DYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEIAVSVGE----------------------LNDPYWVEKRRLVETRQGEDFSISSDDG

Query:  LMFKGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRN------KKREVADFVSRCLVCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLP
        LMF+GRLCV EDS VK ELLTEAHSSPFTMHPGSTKMYQDLR+       KR+VADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGLP
Subjt:  LMFKGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRN------KKREVADFVSRCLVCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLP

Query:  RTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTSKFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYM
        +TLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDA FTSKFWKGLQ+ALGTRLDFST FHPQT+GQTERLNQ+LE M
Subjt:  RTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTSKFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYM

Query:  LRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE
        LRA VL+F GSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRS VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE
Subjt:  LRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE

TYK20443.1 pol protein [Cucumis melo var. makuwa]

0.0

77.64

Show/hide

Query:  MDWLSTNHASIDCFGKEVVFNPLSGPSFKFRGAGIVCIPKVISGMKASKLLNQGTWGILASVVDTREPEVSLSSKPVVREYPDVFSDELLGLPPPREIDF
        MDWLS NHA+IDC+GKEVVFNP S  SFKFRGAG+VCIPKVIS MKASKLL+QGTWGILASVVD REPEVSLSS+PVVREYPDVF DEL GLPPPRE+DF
Subjt:  MDWLSTNHASIDCFGKEVVFNPLSGPSFKFRGAGIVCIPKVISGMKASKLLNQGTWGILASVVDTREPEVSLSSKPVVREYPDVFSDELLGLPPPREIDF

Query:  AIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKID
        AIEL+  TAPISRAPY+MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT KNRYPLPRIDDLFDQLQGATVFSKID
Subjt:  AIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKID

Query:  LRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMVFKDFLDS-------------------------------------------
        LRSGYHQLRIRD DIPKTAFRSRY HY+++VMSFGLTNAPA+FMDLMN VFKDFLDS                                           
Subjt:  LRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMVFKDFLDS-------------------------------------------

Query:  ---------------------------------------------------RFVEGFSRIASPLTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMP
                                                           RFVE FSRIASPLTQLTRKGTPFVWSPACE SF+ELKQKLVTAPVLT+P
Subjt:  ---------------------------------------------------RFVEGFSRIASPLTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMP

Query:  DGSRSFVIYSDACKKELGYVLMQQGK--------LKSHEQNYPTHDLELATVVFALNLWRHYLYGEKIQIFTDHKSLKYFLTQKELNMRQRRWLELVKDY
        DGS +FVIYSDA KK LG VLMQQGK        LK HEQNYPTHDLELA VVFAL +WRHYLYGEKIQI+TDHKSLKYF TQKELNMRQRRWLELVKDY
Subjt:  DGSRSFVIYSDACKKELGYVLMQQGK--------LKSHEQNYPTHDLELATVVFALNLWRHYLYGEKIQIFTDHKSLKYFLTQKELNMRQRRWLELVKDY

Query:  DYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEIAVSVGE----------------------LNDPYWVEKRRLVETRQGEDFSISSDDG
        D EILYHP KANVVADALSRKV HSAALITKQ PLLRDFERAEIAVSVGE                      L+DPY  EKRR+VET QGE FSISSDDG
Subjt:  DYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEIAVSVGE----------------------LNDPYWVEKRRLVETRQGEDFSISSDDG

Query:  LMFKGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRN------KKREVADFVSRCLVCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLP
        LMF+GRLCV EDS VK ELLTEAHSSPFTMHPGSTKMYQDLR+       KR+VADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGLP
Subjt:  LMFKGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRN------KKREVADFVSRCLVCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLP

Query:  RTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTSKFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYM
        +TLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDA FTSKFWKGLQ+ALGTRLDFST FHPQT+GQTERLNQ+LE M
Subjt:  RTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTSKFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYM

Query:  LRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE
        LRA VL+F GSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRS VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE
Subjt:  LRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SIJ5 Reverse transcriptase

0.0e+00

77.86

Show/hide

Query:  MDWLSTNHASIDCFGKEVVFNPLSGPSFKFRGAGIVCIPKVISGMKASKLLNQGTWGILASVVDTREPEVSLSSKPVVREYPDVFSDELLGLPPPREIDF
        MDWLS NHA+IDCFGKEVVFNP SG SFKFRGAG+VCIPKVIS MKASKLL+QGTWGILASVVD REPEVSLSS+PVVREYPDVF DEL GLPPPRE+DF
Subjt:  MDWLSTNHASIDCFGKEVVFNPLSGPSFKFRGAGIVCIPKVISGMKASKLLNQGTWGILASVVDTREPEVSLSSKPVVREYPDVFSDELLGLPPPREIDF

Query:  AIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKID
        AIEL+  TAPISRAPY+MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT KNRYPLPRIDDLFDQLQGATVFSKID
Subjt:  AIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKID

Query:  LRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMVFKDFLDS-------------------------------------------
        LRSGYHQLRIRD DIPKTAFRSRY HY+++VMSFGLTNAPA+FMDLMN VFKDFLDS                                           
Subjt:  LRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMVFKDFLDS-------------------------------------------

Query:  ---------------------------------------------------RFVEGFSRIASPLTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMP
                                                           RFVE FSRIASPLTQLTRKGTPFVWSPACE SF+ELKQKLVTAPVLT+P
Subjt:  ---------------------------------------------------RFVEGFSRIASPLTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMP

Query:  DGSRSFVIYSDACKKELGYVLMQQGK--------LKSHEQNYPTHDLELATVVFALNLWRHYLYGEKIQIFTDHKSLKYFLTQKELNMRQRRWLELVKDY
        DGS +FVIYSDA KK LG VLMQQGK        LK HEQNYPTHDLELA VVFAL +WRHYLYGEKIQI+TDHKSLKYF TQKELNMRQRRWLELVKDY
Subjt:  DGSRSFVIYSDACKKELGYVLMQQGK--------LKSHEQNYPTHDLELATVVFALNLWRHYLYGEKIQIFTDHKSLKYFLTQKELNMRQRRWLELVKDY

Query:  DYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEIAVSVGE----------------------LNDPYWVEKRRLVETRQGEDFSISSDDG
        D EILYHP KANVVADALSRKV HSAALITKQ PLLRDFERAEIAVSVGE                      L+DPY  EKRR+VET QGE FSISSDDG
Subjt:  DYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEIAVSVGE----------------------LNDPYWVEKRRLVETRQGEDFSISSDDG

Query:  LMFKGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRN------KKREVADFVSRCLVCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLP
        LMF+GRLCV EDS VK ELLTEAHSSPFTMHPGSTKMYQDLR+       KR+VADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGLP
Subjt:  LMFKGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRN------KKREVADFVSRCLVCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLP

Query:  RTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTSKFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYM
        +TLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDA FTSKFWKGLQ+ALGTRLDFST FHPQT+GQTERLNQ+LE M
Subjt:  RTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTSKFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYM

Query:  LRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE
        LRA VL+F GSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRS VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE
Subjt:  LRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE

A0A5A7V2A0 Reverse transcriptase

0.0e+00

77.64

Show/hide

Query:  MDWLSTNHASIDCFGKEVVFNPLSGPSFKFRGAGIVCIPKVISGMKASKLLNQGTWGILASVVDTREPEVSLSSKPVVREYPDVFSDELLGLPPPREIDF
        MDWLS NHA+IDC+GKEVVFNP S  SFKFRGAG+VCIPKVIS MKASKLL+QGTWGILASVVD REPEVSLSS+PVVREYPDVF DEL GLPPPRE+DF
Subjt:  MDWLSTNHASIDCFGKEVVFNPLSGPSFKFRGAGIVCIPKVISGMKASKLLNQGTWGILASVVDTREPEVSLSSKPVVREYPDVFSDELLGLPPPREIDF

Query:  AIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKID
        AIEL+  TAPISRAPY+MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT KNRYPLPRIDDLFDQLQGATVFSKID
Subjt:  AIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKID

Query:  LRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMVFKDFLDS-------------------------------------------
        LRSGYHQLRIRD DIPKTAFRSRY HY+++VMSFGLTNAPA+FMDLMN VFKDFLDS                                           
Subjt:  LRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMVFKDFLDS-------------------------------------------

Query:  ---------------------------------------------------RFVEGFSRIASPLTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMP
                                                           RFVE FSRIASPLTQLTRKGTPFVWSPACE SF+ELKQKLVTAPVLT+P
Subjt:  ---------------------------------------------------RFVEGFSRIASPLTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMP

Query:  DGSRSFVIYSDACKKELGYVLMQQGK--------LKSHEQNYPTHDLELATVVFALNLWRHYLYGEKIQIFTDHKSLKYFLTQKELNMRQRRWLELVKDY
        DGS +FVIYSDA KK LG VLMQQGK        LK HEQNYPTHDLELA VVFAL +WRHYLYGEKIQI+TDHKSLKYF TQKELNMRQRRWLELVKDY
Subjt:  DGSRSFVIYSDACKKELGYVLMQQGK--------LKSHEQNYPTHDLELATVVFALNLWRHYLYGEKIQIFTDHKSLKYFLTQKELNMRQRRWLELVKDY

Query:  DYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEIAVSVGE----------------------LNDPYWVEKRRLVETRQGEDFSISSDDG
        D EILYHP KANVVADALSRKV HSAALITKQ PLLRDFERAEIAVSVGE                      L+DPY  EKRR+VET QGE FSISSDDG
Subjt:  DYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEIAVSVGE----------------------LNDPYWVEKRRLVETRQGEDFSISSDDG

Query:  LMFKGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRN------KKREVADFVSRCLVCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLP
        LMF+GRLCV EDS VK ELLTEAHSSPFTMHPGSTKMYQDLR+       KR+VADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGLP
Subjt:  LMFKGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRN------KKREVADFVSRCLVCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLP

Query:  RTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTSKFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYM
        +TLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDA FTSKFWKGLQ+ALGTRLDFST FHPQT+GQTERLNQ+LE M
Subjt:  RTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTSKFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYM

Query:  LRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE
        LRA VL+F GSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRS VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE
Subjt:  LRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE

A0A5D3BTN0 Reverse transcriptase

0.0e+00

77.64

Show/hide

Query:  MDWLSTNHASIDCFGKEVVFNPLSGPSFKFRGAGIVCIPKVISGMKASKLLNQGTWGILASVVDTREPEVSLSSKPVVREYPDVFSDELLGLPPPREIDF
        MDWLS NHA+IDC+GKEVVFNP S  SFKFRGAG+VCIPKVIS MKASKLL+QGTWGILASVVD REPEVSLSS+PVVREYPDVF DEL GLPPPRE+DF
Subjt:  MDWLSTNHASIDCFGKEVVFNPLSGPSFKFRGAGIVCIPKVISGMKASKLLNQGTWGILASVVDTREPEVSLSSKPVVREYPDVFSDELLGLPPPREIDF

Query:  AIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKID
        AIEL+  TAPISRAPY+MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT KNRYPLPRIDDLFDQLQGATVFSKID
Subjt:  AIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKID

Query:  LRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMVFKDFLDS-------------------------------------------
        LRSGYHQLRIRD DIPKTAFRSRY HY+++VMSFGLTNAPA+FMDLMN VFKDFLDS                                           
Subjt:  LRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMVFKDFLDS-------------------------------------------

Query:  ---------------------------------------------------RFVEGFSRIASPLTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMP
                                                           RFVE FSRIASPLTQLTRKGTPFVWSPACE SF+ELKQKLVTAPVLT+P
Subjt:  ---------------------------------------------------RFVEGFSRIASPLTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMP

Query:  DGSRSFVIYSDACKKELGYVLMQQGK--------LKSHEQNYPTHDLELATVVFALNLWRHYLYGEKIQIFTDHKSLKYFLTQKELNMRQRRWLELVKDY
        DGS +FVIYSDA KK LG VLMQQGK        LK HEQNYPTHDLELA VVFAL +WRHYLYGEKIQI+TDHKSLKYF TQKELNMRQRRWLELVKDY
Subjt:  DGSRSFVIYSDACKKELGYVLMQQGK--------LKSHEQNYPTHDLELATVVFALNLWRHYLYGEKIQIFTDHKSLKYFLTQKELNMRQRRWLELVKDY

Query:  DYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEIAVSVGE----------------------LNDPYWVEKRRLVETRQGEDFSISSDDG
        D EILYHP KANVVADALSRKV HSAALITKQ PLLRDFERAEIAVSVGE                      L+DPY  EKRR+VET QGE FSISSDDG
Subjt:  DYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEIAVSVGE----------------------LNDPYWVEKRRLVETRQGEDFSISSDDG

Query:  LMFKGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRN------KKREVADFVSRCLVCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLP
        LMF+GRLCV EDS VK ELLTEAHSSPFTMHPGSTKMYQDLR+       KR+VADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGLP
Subjt:  LMFKGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRN------KKREVADFVSRCLVCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLP

Query:  RTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTSKFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYM
        +TLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDA FTSKFWKGLQ+ALGTRLDFST FHPQT+GQTERLNQ+LE M
Subjt:  RTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTSKFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYM

Query:  LRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE
        LRA VL+F GSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRS VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE
Subjt:  LRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE

A0A5D3C6W3 Reverse transcriptase

0.0e+00

77.64

Show/hide

Query:  MDWLSTNHASIDCFGKEVVFNPLSGPSFKFRGAGIVCIPKVISGMKASKLLNQGTWGILASVVDTREPEVSLSSKPVVREYPDVFSDELLGLPPPREIDF
        MDWLS NHA+IDC+GKEVVFNP S  SFKFRGAG+VCIPKVIS MKASKLL+QGTWGILASVVD REPEVSLSS+PVVREYPDVF DEL GLPPPRE+DF
Subjt:  MDWLSTNHASIDCFGKEVVFNPLSGPSFKFRGAGIVCIPKVISGMKASKLLNQGTWGILASVVDTREPEVSLSSKPVVREYPDVFSDELLGLPPPREIDF

Query:  AIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKID
        AIEL+  TAPISRAPY+MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT KNRYPLPRIDDLFDQLQGATVFSKID
Subjt:  AIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKID

Query:  LRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMVFKDFLDS-------------------------------------------
        LRSGYHQLRIRD DIPKTAFRSRY HY+++VMSFGLTNAPA+FMDLMN VFKDFLDS                                           
Subjt:  LRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMVFKDFLDS-------------------------------------------

Query:  ---------------------------------------------------RFVEGFSRIASPLTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMP
                                                           RFVE FSRIASPLTQLTRKGTPFVWSPACE SF+ELKQKLVTAPVLT+P
Subjt:  ---------------------------------------------------RFVEGFSRIASPLTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMP

Query:  DGSRSFVIYSDACKKELGYVLMQQGK--------LKSHEQNYPTHDLELATVVFALNLWRHYLYGEKIQIFTDHKSLKYFLTQKELNMRQRRWLELVKDY
        DGS +FVIYSDA KK LG VLMQQGK        LK HEQNYPTHDLELA VVFAL +WRHYLYGEKIQI+TDHKSLKYF TQKELNMRQRRWLELVKDY
Subjt:  DGSRSFVIYSDACKKELGYVLMQQGK--------LKSHEQNYPTHDLELATVVFALNLWRHYLYGEKIQIFTDHKSLKYFLTQKELNMRQRRWLELVKDY

Query:  DYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEIAVSVGE----------------------LNDPYWVEKRRLVETRQGEDFSISSDDG
        D EILYHP KANVVADALSRKV HSAALITKQ PLLRDFERAEIAVSVGE                      L+DPY  EKRR+VET QGE FSISSDDG
Subjt:  DYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEIAVSVGE----------------------LNDPYWVEKRRLVETRQGEDFSISSDDG

Query:  LMFKGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRN------KKREVADFVSRCLVCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLP
        LMF+GRLCV EDS VK ELLTEAHSSPFTMHPGSTKMYQDLR+       KR+VADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGLP
Subjt:  LMFKGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRN------KKREVADFVSRCLVCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLP

Query:  RTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTSKFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYM
        +TLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDA FTSKFWKGLQ+ALGTRLDFST FHPQT+GQTERLNQ+LE M
Subjt:  RTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTSKFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYM

Query:  LRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE
        LRA VL+F GSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRS VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE
Subjt:  LRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE

A0A5D3DA59 Reverse transcriptase

0.0e+00

77.64

Show/hide

Query:  MDWLSTNHASIDCFGKEVVFNPLSGPSFKFRGAGIVCIPKVISGMKASKLLNQGTWGILASVVDTREPEVSLSSKPVVREYPDVFSDELLGLPPPREIDF
        MDWLS NHA+IDC+GKEVVFNP S  SFKFRGAG+VCIPKVIS MKASKLL+QGTWGILASVVD REPEVSLSS+PVVREYPDVF DEL GLPPPRE+DF
Subjt:  MDWLSTNHASIDCFGKEVVFNPLSGPSFKFRGAGIVCIPKVISGMKASKLLNQGTWGILASVVDTREPEVSLSSKPVVREYPDVFSDELLGLPPPREIDF

Query:  AIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKID
        AIEL+  TAPISRAPY+MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVT KNRYPLPRIDDLFDQLQGATVFSKID
Subjt:  AIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKID

Query:  LRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMVFKDFLDS-------------------------------------------
        LRSGYHQLRIRD DIPKTAFRSRY HY+++VMSFGLTNAPA+FMDLMN VFKDFLDS                                           
Subjt:  LRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMVFKDFLDS-------------------------------------------

Query:  ---------------------------------------------------RFVEGFSRIASPLTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMP
                                                           RFVE FSRIASPLTQLTRKGTPFVWSPACE SF+ELKQKLVTAPVLT+P
Subjt:  ---------------------------------------------------RFVEGFSRIASPLTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMP

Query:  DGSRSFVIYSDACKKELGYVLMQQGK--------LKSHEQNYPTHDLELATVVFALNLWRHYLYGEKIQIFTDHKSLKYFLTQKELNMRQRRWLELVKDY
        DGS +FVIYSDA KK LG VLMQQGK        LK HEQNYPTHDLELA VVFAL +WRHYLYGEKIQI+TDHKSLKYF TQKELNMRQRRWLELVKDY
Subjt:  DGSRSFVIYSDACKKELGYVLMQQGK--------LKSHEQNYPTHDLELATVVFALNLWRHYLYGEKIQIFTDHKSLKYFLTQKELNMRQRRWLELVKDY

Query:  DYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEIAVSVGE----------------------LNDPYWVEKRRLVETRQGEDFSISSDDG
        D EILYHP KANVVADALSRKV HSAALITKQ PLLRDFERAEIAVSVGE                      L+DPY  EKRR+VET QGE FSISSDDG
Subjt:  DYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEIAVSVGE----------------------LNDPYWVEKRRLVETRQGEDFSISSDDG

Query:  LMFKGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRN------KKREVADFVSRCLVCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLP
        LMF+GRLCV EDS VK ELLTEAHSSPFTMHPGSTKMYQDLR+       KR+VADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWESVSMDFITGLP
Subjt:  LMFKGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRN------KKREVADFVSRCLVCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLP

Query:  RTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTSKFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYM
        +TLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDA FTSKFWKGLQ+ALGTRLDFST FHPQT+GQTERLNQ+LE M
Subjt:  RTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTSKFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYM

Query:  LRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE
        LRA VL+F GSWDSHLHLMEF YNNSYQATIGMAPFEALYGKCCRS VCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE
Subjt:  LRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFE

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.2e-86

26.83

Show/hide

Query:  REPEVSLSSKPVVREYPDVFSD-ELLGLPPP-REIDFAIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC
        +EPE+      + +E+ D+ ++     LP P + ++F +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ 
Subjt:  REPEVSLSSKPVVREYPDVFSD-ELLGLPPP-REIDFAIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC

Query:  IDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMV-------------
        +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R  D  K AFR     ++Y+VM +G++ APA F   +N +             
Subjt:  IDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMV-------------

Query:  ----------------------------------------------------------------------------FKDFLDS-----RFVEGFSRIASP
                                                                                     + FL S     +F+   S++  P
Subjt:  ----------------------------------------------------------------------------FKDFLDS-----RFVEGFSRIASP

Query:  LTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMPDGSRSFVIYSDACKKELGYVLMQQ-------------GKLKSHEQNYPTHDLELATVVFALNL
        L  L +K   + W+P    + + +KQ LV+ PVL   D S+  ++ +DA    +G VL Q+              K+   + NY   D E+  ++ +L  
Subjt:  LTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMPDGSRSFVIYSDACKKELGYVLMQQ-------------GKLKSHEQNYPTHDLELATVVFALNL

Query:  WRHYLYG--EKIQIFTDHKSLKYFLTQKE--LNMRQRRWLELVKDYDYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEI-AVSVGELND
        WRHYL    E  +I TDH++L   +T +    N R  RW   ++D+++EI Y P  AN +ADALSR       ++ +  P+ +D E   I  V+   + D
Subjt:  WRHYLYG--EKIQIFTDHKSLKYFLTQKE--LNMRQRRWLELVKDYDYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEI-AVSVGELND

Query:  PY-------WVEKRRLVETRQGEDFSISSD----DGLMF--KGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRNK------KREVADFVSRCL
         +       +    +L+     ED  +  +    DGL+   K ++ +  D+ +   ++ + H     +HPG   +   +  +      ++++ ++V  C 
Subjt:  PY-------WVEKRRLVETRQGEDFSISSD----DGLMF--KGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRNK------KREVADFVSRCL

Query:  VCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTS
         CQ  K+   KP G LQP+      WES+SMDFIT LP +  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  I++D D  FTS
Subjt:  VCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTS

Query:  KFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYMLRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPE
        + WK         + FS  + PQT+GQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      S    E+        E
Subjt:  KFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYMLRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPE

Query:  LVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLE
          Q T    Q ++  + T   + K Y D++ +++E
Subjt:  LVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLE

P0CT35 Transposon Tf2-2 polyprotein

1.2e-86

26.83

Show/hide

Query:  REPEVSLSSKPVVREYPDVFSD-ELLGLPPP-REIDFAIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC
        +EPE+      + +E+ D+ ++     LP P + ++F +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ 
Subjt:  REPEVSLSSKPVVREYPDVFSD-ELLGLPPP-REIDFAIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC

Query:  IDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMV-------------
        +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R  D  K AFR     ++Y+VM +G++ APA F   +N +             
Subjt:  IDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMV-------------

Query:  ----------------------------------------------------------------------------FKDFLDS-----RFVEGFSRIASP
                                                                                     + FL S     +F+   S++  P
Subjt:  ----------------------------------------------------------------------------FKDFLDS-----RFVEGFSRIASP

Query:  LTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMPDGSRSFVIYSDACKKELGYVLMQQ-------------GKLKSHEQNYPTHDLELATVVFALNL
        L  L +K   + W+P    + + +KQ LV+ PVL   D S+  ++ +DA    +G VL Q+              K+   + NY   D E+  ++ +L  
Subjt:  LTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMPDGSRSFVIYSDACKKELGYVLMQQ-------------GKLKSHEQNYPTHDLELATVVFALNL

Query:  WRHYLYG--EKIQIFTDHKSLKYFLTQKE--LNMRQRRWLELVKDYDYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEI-AVSVGELND
        WRHYL    E  +I TDH++L   +T +    N R  RW   ++D+++EI Y P  AN +ADALSR       ++ +  P+ +D E   I  V+   + D
Subjt:  WRHYLYG--EKIQIFTDHKSLKYFLTQKE--LNMRQRRWLELVKDYDYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEI-AVSVGELND

Query:  PY-------WVEKRRLVETRQGEDFSISSD----DGLMF--KGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRNK------KREVADFVSRCL
         +       +    +L+     ED  +  +    DGL+   K ++ +  D+ +   ++ + H     +HPG   +   +  +      ++++ ++V  C 
Subjt:  PY-------WVEKRRLVETRQGEDFSISSD----DGLMF--KGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRNK------KREVADFVSRCL

Query:  VCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTS
         CQ  K+   KP G LQP+      WES+SMDFIT LP +  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  I++D D  FTS
Subjt:  VCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTS

Query:  KFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYMLRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPE
        + WK         + FS  + PQT+GQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      S    E+        E
Subjt:  KFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYMLRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPE

Query:  LVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLE
          Q T    Q ++  + T   + K Y D++ +++E
Subjt:  LVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLE

P0CT36 Transposon Tf2-3 polyprotein

1.2e-86

26.83

Show/hide

Query:  REPEVSLSSKPVVREYPDVFSD-ELLGLPPP-REIDFAIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC
        +EPE+      + +E+ D+ ++     LP P + ++F +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ 
Subjt:  REPEVSLSSKPVVREYPDVFSD-ELLGLPPP-REIDFAIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC

Query:  IDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMV-------------
        +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R  D  K AFR     ++Y+VM +G++ APA F   +N +             
Subjt:  IDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMV-------------

Query:  ----------------------------------------------------------------------------FKDFLDS-----RFVEGFSRIASP
                                                                                     + FL S     +F+   S++  P
Subjt:  ----------------------------------------------------------------------------FKDFLDS-----RFVEGFSRIASP

Query:  LTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMPDGSRSFVIYSDACKKELGYVLMQQ-------------GKLKSHEQNYPTHDLELATVVFALNL
        L  L +K   + W+P    + + +KQ LV+ PVL   D S+  ++ +DA    +G VL Q+              K+   + NY   D E+  ++ +L  
Subjt:  LTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMPDGSRSFVIYSDACKKELGYVLMQQ-------------GKLKSHEQNYPTHDLELATVVFALNL

Query:  WRHYLYG--EKIQIFTDHKSLKYFLTQKE--LNMRQRRWLELVKDYDYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEI-AVSVGELND
        WRHYL    E  +I TDH++L   +T +    N R  RW   ++D+++EI Y P  AN +ADALSR       ++ +  P+ +D E   I  V+   + D
Subjt:  WRHYLYG--EKIQIFTDHKSLKYFLTQKE--LNMRQRRWLELVKDYDYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEI-AVSVGELND

Query:  PY-------WVEKRRLVETRQGEDFSISSD----DGLMF--KGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRNK------KREVADFVSRCL
         +       +    +L+     ED  +  +    DGL+   K ++ +  D+ +   ++ + H     +HPG   +   +  +      ++++ ++V  C 
Subjt:  PY-------WVEKRRLVETRQGEDFSISSD----DGLMF--KGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRNK------KREVADFVSRCL

Query:  VCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTS
         CQ  K+   KP G LQP+      WES+SMDFIT LP +  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  I++D D  FTS
Subjt:  VCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTS

Query:  KFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYMLRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPE
        + WK         + FS  + PQT+GQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      S    E+        E
Subjt:  KFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYMLRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPE

Query:  LVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLE
          Q T    Q ++  + T   + K Y D++ +++E
Subjt:  LVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLE

P0CT37 Transposon Tf2-4 polyprotein

1.2e-86

26.83

Show/hide

Query:  REPEVSLSSKPVVREYPDVFSD-ELLGLPPP-REIDFAIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC
        +EPE+      + +E+ D+ ++     LP P + ++F +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ 
Subjt:  REPEVSLSSKPVVREYPDVFSD-ELLGLPPP-REIDFAIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC

Query:  IDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMV-------------
        +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R  D  K AFR     ++Y+VM +G++ APA F   +N +             
Subjt:  IDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMV-------------

Query:  ----------------------------------------------------------------------------FKDFLDS-----RFVEGFSRIASP
                                                                                     + FL S     +F+   S++  P
Subjt:  ----------------------------------------------------------------------------FKDFLDS-----RFVEGFSRIASP

Query:  LTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMPDGSRSFVIYSDACKKELGYVLMQQ-------------GKLKSHEQNYPTHDLELATVVFALNL
        L  L +K   + W+P    + + +KQ LV+ PVL   D S+  ++ +DA    +G VL Q+              K+   + NY   D E+  ++ +L  
Subjt:  LTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMPDGSRSFVIYSDACKKELGYVLMQQ-------------GKLKSHEQNYPTHDLELATVVFALNL

Query:  WRHYLYG--EKIQIFTDHKSLKYFLTQKE--LNMRQRRWLELVKDYDYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEI-AVSVGELND
        WRHYL    E  +I TDH++L   +T +    N R  RW   ++D+++EI Y P  AN +ADALSR       ++ +  P+ +D E   I  V+   + D
Subjt:  WRHYLYG--EKIQIFTDHKSLKYFLTQKE--LNMRQRRWLELVKDYDYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEI-AVSVGELND

Query:  PY-------WVEKRRLVETRQGEDFSISSD----DGLMF--KGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRNK------KREVADFVSRCL
         +       +    +L+     ED  +  +    DGL+   K ++ +  D+ +   ++ + H     +HPG   +   +  +      ++++ ++V  C 
Subjt:  PY-------WVEKRRLVETRQGEDFSISSD----DGLMF--KGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRNK------KREVADFVSRCL

Query:  VCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTS
         CQ  K+   KP G LQP+      WES+SMDFIT LP +  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  I++D D  FTS
Subjt:  VCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTS

Query:  KFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYMLRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPE
        + WK         + FS  + PQT+GQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      S    E+        E
Subjt:  KFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYMLRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPE

Query:  LVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLE
          Q T    Q ++  + T   + K Y D++ +++E
Subjt:  LVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLE

P0CT41 Transposon Tf2-12 polyprotein

1.2e-86

26.83

Show/hide

Query:  REPEVSLSSKPVVREYPDVFSD-ELLGLPPP-REIDFAIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC
        +EPE+      + +E+ D+ ++     LP P + ++F +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ 
Subjt:  REPEVSLSSKPVVREYPDVFSD-ELLGLPPP-REIDFAIELKSSTAPISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC

Query:  IDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMV-------------
        +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R+R  D  K AFR     ++Y+VM +G++ APA F   +N +             
Subjt:  IDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYRHYDYIVMSFGLTNAPAIFMDLMNMV-------------

Query:  ----------------------------------------------------------------------------FKDFLDS-----RFVEGFSRIASP
                                                                                     + FL S     +F+   S++  P
Subjt:  ----------------------------------------------------------------------------FKDFLDS-----RFVEGFSRIASP

Query:  LTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMPDGSRSFVIYSDACKKELGYVLMQQ-------------GKLKSHEQNYPTHDLELATVVFALNL
        L  L +K   + W+P    + + +KQ LV+ PVL   D S+  ++ +DA    +G VL Q+              K+   + NY   D E+  ++ +L  
Subjt:  LTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMPDGSRSFVIYSDACKKELGYVLMQQ-------------GKLKSHEQNYPTHDLELATVVFALNL

Query:  WRHYLYG--EKIQIFTDHKSLKYFLTQKE--LNMRQRRWLELVKDYDYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEI-AVSVGELND
        WRHYL    E  +I TDH++L   +T +    N R  RW   ++D+++EI Y P  AN +ADALSR       ++ +  P+ +D E   I  V+   + D
Subjt:  WRHYLYG--EKIQIFTDHKSLKYFLTQKE--LNMRQRRWLELVKDYDYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERAEI-AVSVGELND

Query:  PY-------WVEKRRLVETRQGEDFSISSD----DGLMF--KGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRNK------KREVADFVSRCL
         +       +    +L+     ED  +  +    DGL+   K ++ +  D+ +   ++ + H     +HPG   +   +  +      ++++ ++V  C 
Subjt:  PY-------WVEKRRLVETRQGEDFSISSD----DGLMF--KGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRNK------KREVADFVSRCL

Query:  VCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTS
         CQ  K+   KP G LQP+      WES+SMDFIT LP +  GY  ++VVVDR +K A  VP   + TA +  +++   ++   G P  I++D D  FTS
Subjt:  VCQQVKAPRQKPAGLLQPLSVPGWKWESVSMDFITGLPRTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTS

Query:  KFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYMLRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPE
        + WK         + FS  + PQT+GQTER NQ +E +LR        +W  H+ L++ +YNN+  +   M PFE ++      S    E+        E
Subjt:  KFWKGLQLALGTRLDFSTVFHPQTNGQTERLNQVLEYMLRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPE

Query:  LVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLE
          Q T    Q ++  + T   + K Y D++ +++E
Subjt:  LVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLE

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

2.6e-04

39.29

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Query:  RFVEGFSRIASPLTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMPDGSRSFV
        RFV+ + +I  PLT+L +K +   W+     +FK LK  + T PVL +PD    FV
Subjt:  RFVEGFSRIASPLTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMPDGSRSFV

Sequences

Show/hide sequences

CDS sequence

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ATGGATTGGCTGTCGACTAACCATGCAAGTATAGACTGTTTTGGTAAGGAAGTCGTTTTTAACCCTCTCTCTGGGCCTAGTTTCAAATTTAGGGGGGCAGGCATTGTATG
TATACCTAAGGTCATCTCAGGCATGAAGGCTAGTAAACTACTCAACCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTAGATACTAGAGAACCAGAAGTTTCCCTGTCCT
CCAAACCCGTGGTAAGGGAGTACCCCGATGTTTTCTCCGACGAGCTTCTAGGACTTCCGCCTCCCAGAGAGATAGACTTCGCCATCGAGTTAAAGTCAAGCACTGCTCCT
ATCTCGAGGGCCCCTTACAAAATGGCTCCAGCCGAGCTGAAGGAGCTGAAGGTACAGCTGCAAGAGTTGCTGGACAAGGGTTTCATCCGACCCAGTGTGTCACCTTGGGG
AGCACCAGTGTTGTTTGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACAGAGAGCTAAACAAGGTGACAACCAAGAATCGTTACCCCTTGCCCAGGATTG
ATGACTTGTTCGATCAATTGCAGGGAGCCACCGTCTTTTCTAAGATCGATCTGCGATCAGGCTATCACCAGTTGAGGATCAGGGATAGCGACATTCCTAAGACCGCTTTC
CGTTCCAGATACAGGCACTATGACTACATCGTGATGTCGTTTGGGTTGACTAATGCTCCTGCGATATTCATGGACTTGATGAACATGGTGTTTAAGGATTTCTTAGACTC
GAGGTTCGTAGAAGGCTTCTCACGTATAGCCAGTCCCTTGACTCAGTTGACAAGGAAGGGGACTCCTTTTGTTTGGAGCCCAGCTTGCGAGAGTAGCTTCAAGGAGCTTA
AGCAGAAGCTTGTGACTGCACCAGTCCTGACAATGCCAGATGGATCGAGGAGCTTTGTGATCTACAGTGATGCCTGCAAAAAAGAACTGGGCTATGTTCTGATGCAGCAA
GGTAAGTTGAAGAGTCATGAGCAGAACTATCCTACCCATGACCTAGAGTTGGCAACAGTGGTTTTTGCACTAAATTTATGGAGACACTACCTGTATGGTGAGAAGATACA
GATTTTCACTGACCATAAGAGCCTGAAGTACTTCCTCACCCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTTGAGTTAGTGAAAGACTATGACTACGAGATTCTGT
ATCACCCAAGTAAGGCAAATGTAGTAGCTGACGCGCTGAGTAGGAAGGTTACACATTCAGCAGCGCTTATCACCAAGCAAGCTCCCTTACTCAGAGATTTTGAGAGAGCC
GAGATTGCAGTCTCAGTAGGAGAGCTAAATGATCCTTATTGGGTCGAGAAGCGTCGTTTGGTAGAGACAAGGCAAGGTGAGGATTTCTCAATATCCTCTGACGATGGCCT
TATGTTTAAGGGACGTTTGTGTGTGTCAGAAGACAGTGTAGTCAAGATAGAGCTTTTGACTGAGGCTCACAGTTCTCCATTTACTATGCACCCTGGAAGTACGAAGATGT
ACCAAGACTTAAGGAACAAGAAGAGAGAAGTGGCAGACTTCGTTAGTAGGTGCTTGGTATGTCAGCAGGTGAAGGCACCGAGACAGAAGCCAGCAGGTTTGTTGCAGCCC
TTGAGTGTGCCAGGTTGGAAATGGGAGAGCGTTTCGATGGACTTCATCACAGGACTGCCCAGGACTCTAAAGGGCTATACGGTCATTTGGGTTGTTGTTGACAGACTCAC
GAAGTCAGCTCACTTTGTTCCAGGGAAATCCACTTACACTGCCAGTAAGTGGGGACAGTTATATATGACGGAGATAGTGAGACTGCATGGAGTACCTGTATCCATCGTTT
CGGACAGAGATGCTCCTTTCACATCGAAGTTCTGGAAAGGGCTTCAACTTGCATTAGGCACGAGGTTAGACTTCAGCACAGTCTTCCACCCTCAGACTAATGGTCAGACA
GAGAGGTTGAACCAGGTTTTGGAATACATGCTGCGAGCCCGTGTTCTGAAATTTTTAGGGAGTTGGGACTCTCACTTGCACTTAATGGAATTCACTTATAATAACAGCTA
TCAGGCTACTATCGGCATGGCACCATTTGAGGCTCTGTATGGTAAGTGTTGTAGATCTTCTGTCTGCTGGGGCGAGGTTGGTGAGCAGAGGATGCTAGGCCCCGAGTTAG
TTCAGACCACCAATGCAGCCATACAGAAGATCCGAGCTCGTATGTTGACAGCACAGAGCAGACAGAAGAGTTATGCTGATGTACGGCGTAAGGATCTCGAGTTTGAGAAA
GAACTGAATTTGAGACAAAGGCATTTGATGGAACTAATTAGGGACTATGAATGCATTCTTGCATATCATCCTGGAAAAGCCAATGTTGTGGCTTACGCATTGAGCATAAA
GAATTTAAGTAAAGAAAGCAAAGAGAGAATAACCTTTCTAGAAGAATTGGAAGGCTGCAAAGCAATCTTACGCACAGAACCAGTTGGAAATTTGATAGCACGATTCCAAG
TTAAACTTACACTTGAAGAGGAAATTGTTAAAACGCAATCTGAAGACCATGCATTAAGAAAGTTAACTGAAGAAGTTAGATGTGAATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MDWLSTNHASIDCFGKEVVFNPLSGPSFKFRGAGIVCIPKVISGMKASKLLNQGTWGILASVVDTREPEVSLSSKPVVREYPDVFSDELLGLPPPREIDFAIELKSSTAP
ISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAF
RSRYRHYDYIVMSFGLTNAPAIFMDLMNMVFKDFLDSRFVEGFSRIASPLTQLTRKGTPFVWSPACESSFKELKQKLVTAPVLTMPDGSRSFVIYSDACKKELGYVLMQQ
GKLKSHEQNYPTHDLELATVVFALNLWRHYLYGEKIQIFTDHKSLKYFLTQKELNMRQRRWLELVKDYDYEILYHPSKANVVADALSRKVTHSAALITKQAPLLRDFERA
EIAVSVGELNDPYWVEKRRLVETRQGEDFSISSDDGLMFKGRLCVSEDSVVKIELLTEAHSSPFTMHPGSTKMYQDLRNKKREVADFVSRCLVCQQVKAPRQKPAGLLQP
LSVPGWKWESVSMDFITGLPRTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDAPFTSKFWKGLQLALGTRLDFSTVFHPQTNGQT
ERLNQVLEYMLRARVLKFLGSWDSHLHLMEFTYNNSYQATIGMAPFEALYGKCCRSSVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDLEFEK
ELNLRQRHLMELIRDYECILAYHPGKANVVAYALSIKNLSKESKERITFLEELEGCKAILRTEPVGNLIARFQVKLTLEEEIVKTQSEDHALRKLTEEVRCE

IVF0025425 (gene) of Melon (IVF77) v1 genome