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IVF0025555 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025555
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr12:8964626..8964811
RNA-Seq ExpressionIVF0025555
SyntenyIVF0025555
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046555.1 hypothetical protein E6C27_scaffold114G00780 [Cucumis melo var. makuwa]4.07e-0676.67Show/hide
Query:  MVYFTKQCLSGVRHLTVLSDRNQPREDGFD
        MVYFT++ LSGVRHL +LSDRNQPREDG +
Subjt:  MVYFTKQCLSGVRHLTVLSDRNQPREDGFD

KAA0050427.1 uncharacterized protein E6C27_scaffold175G00150 [Cucumis melo var. makuwa]2.91e-1264.81Show/hide
Query:  MVYFTKQCLSGVRHLTVLSDRNQPREDGFDCAALIKMKIDCAALKMIIVCTTLK
        MVYFT++ LSGV+HL V  DRNQ +EDG DC  L KMKI+C ALKM I C  LK
Subjt:  MVYFTKQCLSGVRHLTVLSDRNQPREDGFDCAALIKMKIDCAALKMIIVCTTLK

KAA0052092.1 hypothetical protein E6C27_scaffold578G00740 [Cucumis melo var. makuwa]5.34e-35100Show/hide
Query:  MVYFTKQCLSGVRHLTVLSDRNQPREDGFDCAALIKMKIDCAALKMIIVCTTLKRMIVSSH
        MVYFTKQCLSGVRHLTVLSDRNQPREDGFDCAALIKMKIDCAALKMIIVCTTLKRMIVSSH
Subjt:  MVYFTKQCLSGVRHLTVLSDRNQPREDGFDCAALIKMKIDCAALKMIIVCTTLKRMIVSSH

KAA0057574.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.36e-0682.14Show/hide
Query:  MVYFTKQCLSGVRHLTVLSDRNQPREDG
        MVYFT++ LSGVRHL +LSDRNQPREDG
Subjt:  MVYFTKQCLSGVRHLTVLSDRNQPREDG

TYK01658.1 hypothetical protein E5676_scaffold128G00250 [Cucumis melo var. makuwa]1.54e-2282.46Show/hide
Query:  MVYFTKQCLSGVRHLTVLSDRNQPREDGFDCAALIKMKIDCAALKMIIVCTTLKRMI
        MVYFT++CLSGVRHL VLSDRNQPREDG DCAAL K+KIDC ALKMIIVC  LK MI
Subjt:  MVYFTKQCLSGVRHLTVLSDRNQPREDGFDCAALIKMKIDCAALKMIIVCTTLKRMI

TrEMBL top hitse value%identityAlignment
A0A5A7TYW3 Uncharacterized protein1.6e-0476.67Show/hide
Query:  MVYFTKQCLSGVRHLTVLSDRNQPREDGFD
        MVYFT++ LSGVRHL +LSDRNQPREDG +
Subjt:  MVYFTKQCLSGVRHLTVLSDRNQPREDGFD

A0A5A7U2Q8 PMD domain-containing protein2.7e-0482.14Show/hide
Query:  MVYFTKQCLSGVRHLTVLSDRNQPREDG
        MVYFT++ LSGVRHL +LSDRNQPREDG
Subjt:  MVYFTKQCLSGVRHLTVLSDRNQPREDG

A0A5A7U7S4 Uncharacterized protein1.4e-0862.3Show/hide
Query:  MVYFTKQCLSGVRHLTVLSDRNQPREDGFDCAALIKMKIDCAALKMIIVCTTL--KRMIVS
        MVYFT++ LSGV+HL V  DRNQ +EDG DC  L KMKI+C ALKM I C  L  K MI+S
Subjt:  MVYFTKQCLSGVRHLTVLSDRNQPREDGFDCAALIKMKIDCAALKMIIVCTTL--KRMIVS

A0A5D3BR16 Uncharacterized protein7.3e-26100Show/hide
Query:  MVYFTKQCLSGVRHLTVLSDRNQPREDGFDCAALIKMKIDCAALKMIIVCTTLKRMIVSSH
        MVYFTKQCLSGVRHLTVLSDRNQPREDGFDCAALIKMKIDCAALKMIIVCTTLKRMIVSSH
Subjt:  MVYFTKQCLSGVRHLTVLSDRNQPREDGFDCAALIKMKIDCAALKMIIVCTTLKRMIVSSH

A0A5D3BRM4 Uncharacterized protein1.1e-1682.46Show/hide
Query:  MVYFTKQCLSGVRHLTVLSDRNQPREDGFDCAALIKMKIDCAALKMIIVCTTLKRMI
        MVYFT++CLSGVRHL VLSDRNQPREDG DCAAL K+KIDC ALKMIIVC  LK MI
Subjt:  MVYFTKQCLSGVRHLTVLSDRNQPREDGFDCAALIKMKIDCAALKMIIVCTTLKRMI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTACTTCACAAAACAATGCTTGTCAGGAGTCCGACACCTCACAGTACTTTCTGATCGAAATCAACCAAGAGAAGATGGATTCGATTGCGCCGCATTGATCAAGAT
GAAGATCGACTGCGCCGCATTGAAGATGATCATCGTGTGTACCACATTGAAGAGGATGATCGTCTCGTCGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTACTTCACAAAACAATGCTTGTCAGGAGTCCGACACCTCACAGTACTTTCTGATCGAAATCAACCAAGAGAAGATGGATTCGATTGCGCCGCATTGATCAAGAT
GAAGATCGACTGCGCCGCATTGAAGATGATCATCGTGTGTACCACATTGAAGAGGATGATCGTCTCGTCGCATTGA
Protein sequenceShow/hide protein sequence
MVYFTKQCLSGVRHLTVLSDRNQPREDGFDCAALIKMKIDCAALKMIIVCTTLKRMIVSSH