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IVF0025559 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025559
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionChaperone protein ClpC1 chloroplastic
Genome locationchr08:18029392..18029628
RNA-Seq ExpressionIVF0025559
SyntenyIVF0025559
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033147.1 hypothetical protein E6C27_scaffold269G002910 [Cucumis melo var. makuwa]1.75e-1359.42Show/hide
Query:  LKKYQATLGKASLSNEVDEPSLVDGPVSERKGERQP-QTTLIKGVRIQLLKDKLGDLLIIVSRETSKKE
        LKKYQ T+GKASLSNE  E +  DG VSE++ E++P +  +I GV IQL +DKLGDLL I+  ETSK+E
Subjt:  LKKYQATLGKASLSNEVDEPSLVDGPVSERKGERQP-QTTLIKGVRIQLLKDKLGDLLIIVSRETSKKE

KAA0034977.1 hypothetical protein E6C27_scaffold57G00110 [Cucumis melo var. makuwa]3.61e-1870.97Show/hide
Query:  LKKYQATLGKASLSNEVDEPSLVDGPVSERKGERQPQTTLIKGVRIQLLKDKLGDLLIIVSR
        LKKYQATLG+AS SN+V E S VDGP+ E+KGE Q +T +I GV+IQL KDKLGDLL IVSR
Subjt:  LKKYQATLGKASLSNEVDEPSLVDGPVSERKGERQPQTTLIKGVRIQLLKDKLGDLLIIVSR

KAA0048215.1 hypothetical protein E6C27_scaffold63G001290 [Cucumis melo var. makuwa]4.09e-1260.29Show/hide
Query:  LKKYQATLGKASLSNEVDEPSLVDGPVSERKGERQPQTTLIKGVRIQLLKDKLGDLLIIVSRETSKKE
        LKKYQATLGKAS SNE  E S   GPV E K +   +   I  V+IQL +DKL DLL IVS ETS+KE
Subjt:  LKKYQATLGKASLSNEVDEPSLVDGPVSERKGERQPQTTLIKGVRIQLLKDKLGDLLIIVSRETSKKE

KGN44567.1 hypothetical protein Csa_016483 [Cucumis sativus]1.85e-1257.14Show/hide
Query:  LKKYQATLGKAS-LSNEVDEPSLVDGPVSERKGERQPQTTLIKGVRIQLLKDKLGDLLIIVSRETSKKEK
        LKKYQAT+GKAS  S+ V+        + +RK E Q +  +I GV+IQLL+DKLG+LL IVSRETSK+EK
Subjt:  LKKYQATLGKAS-LSNEVDEPSLVDGPVSERKGERQPQTTLIKGVRIQLLKDKLGDLLIIVSRETSKKEK

TYK03307.1 hypothetical protein E5676_scaffold298G001510 [Cucumis melo var. makuwa]5.70e-0952.17Show/hide
Query:  LKKYQATLGKASLSNEVDEPSLVDGPVSERKGERQP-QTTLIKGVRIQLLKDKLGDLLIIVSRETSKKE
        L KYQ  +GKASLSN   E +    P+ E++ E+   +  +I  V IQL +DKL DLLIIVSRETSK+E
Subjt:  LKKYQATLGKASLSNEVDEPSLVDGPVSERKGERQP-QTTLIKGVRIQLLKDKLGDLLIIVSRETSKKE

TrEMBL top hitse value%identityAlignment
A0A0A0K8A0 Uncharacterized protein3.9e-0857.14Show/hide
Query:  LKKYQATLGKAS-LSNEVDEPSLVDGPVSERKGERQPQTTLIKGVRIQLLKDKLGDLLIIVSRETSKKEK
        LKKYQAT+GKAS  S+ V+        + +RK E Q +  +I GV+IQLL+DKLG+LL IVSRETSK+EK
Subjt:  LKKYQATLGKAS-LSNEVDEPSLVDGPVSERKGERQPQTTLIKGVRIQLLKDKLGDLLIIVSRETSKKEK

A0A5A7SUZ4 Uncharacterized protein5.5e-1059.42Show/hide
Query:  LKKYQATLGKASLSNEVDEPSLVDGPVSERKGERQP-QTTLIKGVRIQLLKDKLGDLLIIVSRETSKKE
        LKKYQ T+GKASLSNE  E +  DG VSE++ E++P +  +I GV IQL +DKLGDLL I+  ETSK+E
Subjt:  LKKYQATLGKASLSNEVDEPSLVDGPVSERKGERQP-QTTLIKGVRIQLLKDKLGDLLIIVSRETSKKE

A0A5D3BV17 Uncharacterized protein3.1e-0551.43Show/hide
Query:  LKKYQATLGKASLSNEVDEPSLVDGPVSERKGER-QPQTTLIKGVRIQLLKDKLGDLLIIVSRETSKKEK
        L KYQ  +GKASLSN   E +    P+ E++ E+   +  +I  V IQL +DKL DLLIIVSRETSK+E+
Subjt:  LKKYQATLGKASLSNEVDEPSLVDGPVSERKGER-QPQTTLIKGVRIQLLKDKLGDLLIIVSRETSKKEK

A0A5D3BW29 Uncharacterized protein4.5e-1270.97Show/hide
Query:  LKKYQATLGKASLSNEVDEPSLVDGPVSERKGERQPQTTLIKGVRIQLLKDKLGDLLIIVSR
        LKKYQATLG+AS SN+V E S VDGP+ E+KGE Q +T +I GV+IQL KDKLGDLL IVSR
Subjt:  LKKYQATLGKASLSNEVDEPSLVDGPVSERKGERQPQTTLIKGVRIQLLKDKLGDLLIIVSR

A0A5D3C865 Uncharacterized protein2.3e-0859.42Show/hide
Query:  LKKYQATLGKASLSNEVDEPSLVDGPVSERKGERQPQTTLIKGVRIQLLKDKLGDLLIIVSRETSKKEK
        LKKYQATLGKAS SNE  E S   GPV E K +   +   I  V+IQL +DKL DLL IVS ETS+KE+
Subjt:  LKKYQATLGKASLSNEVDEPSLVDGPVSERKGERQPQTTLIKGVRIQLLKDKLGDLLIIVSRETSKKEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAGAGAGCATAATCCCTTACTCAAGAAATACCAAGCCACACTTGGCAAAGCAAGCCTGTCCAATGAAGTAGACGAGCCTTCTCTAGTCGACGGTCCTGTGTCGGA
GCGAAAAGGAGAAAGACAACCTCAAACAACTCTTATCAAAGGAGTTCGGATTCAACTGCTAAAGGATAAGTTAGGAGACCTACTCATCATCGTCTCTAGGGAGACTTCAA
AGAAAGAAAAGAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAGAGAGCATAATCCCTTACTCAAGAAATACCAAGCCACACTTGGCAAAGCAAGCCTGTCCAATGAAGTAGACGAGCCTTCTCTAGTCGACGGTCCTGTGTCGGA
GCGAAAAGGAGAAAGACAACCTCAAACAACTCTTATCAAAGGAGTTCGGATTCAACTGCTAAAGGATAAGTTAGGAGACCTACTCATCATCGTCTCTAGGGAGACTTCAA
AGAAAGAAAAGAGCTGA
Protein sequenceShow/hide protein sequence
MSREHNPLLKKYQATLGKASLSNEVDEPSLVDGPVSERKGERQPQTTLIKGVRIQLLKDKLGDLLIIVSRETSKKEKS