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IVF0025592 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025592
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr07:9406014..9406257
RNA-Seq ExpressionIVF0025592
SyntenyIVF0025592
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031645.1 hypothetical protein E6C27_scaffold139G004180 [Cucumis melo var. makuwa]1.23e-1565.62Show/hide
Query:  VDSAIEEVGTSKTPISKQVKQSLHQSALLEEI--------LLHPKEMPALKNTYRRSTRHMLPL
        +DS IE VGTSKTP+SK  +QSL  S+LLEEI        +LHPKEMPALKN YRRS R MLPL
Subjt:  VDSAIEEVGTSKTPISKQVKQSLHQSALLEEI--------LLHPKEMPALKNTYRRSTRHMLPL

KAA0042436.1 hypothetical protein E6C27_scaffold266G00150 [Cucumis melo var. makuwa]1.51e-13100Show/hide
Query:  MGPHAVDSAIEEVGTSKTPISKQVKQSLHQSALLEEI
        MGPHAVDSAIEEVGTSKTPISKQVKQSLHQSALLEEI
Subjt:  MGPHAVDSAIEEVGTSKTPISKQVKQSLHQSALLEEI

KAA0065436.1 hypothetical protein E6C27_scaffold17G001150 [Cucumis melo var. makuwa]2.30e-1157.38Show/hide
Query:  MGPHAVDSAIEEVGTSKTPISKQVKQSLHQSALLEEI--------LLHPKEMPALKNTYRR
        M PH VDS I+EVGTSKTPISK +++ LH S LL+EI        +LHPKEM  LK  Y R
Subjt:  MGPHAVDSAIEEVGTSKTPISKQVKQSLHQSALLEEI--------LLHPKEMPALKNTYRR

TYK01669.1 hypothetical protein E5676_scaffold517G00020 [Cucumis melo var. makuwa]7.04e-1082.86Show/hide
Query:  PHAVDSAIEEVGTSKTPISKQVKQSLHQSALLEEI
        PHA+DSAIEEVGTSKTP+SK  +QSLH SALLEEI
Subjt:  PHAVDSAIEEVGTSKTPISKQVKQSLHQSALLEEI

TYK03498.1 hypothetical protein E5676_scaffold121G001190 [Cucumis melo var. makuwa]1.33e-13100Show/hide
Query:  MGPHAVDSAIEEVGTSKTPISKQVKQSLHQSALLEEI
        MGPHAVDSAIEEVGTSKTPISKQVKQSLHQSALLEEI
Subjt:  MGPHAVDSAIEEVGTSKTPISKQVKQSLHQSALLEEI

TrEMBL top hitse value%identityAlignment
A0A5A7TKG1 Uncharacterized protein3.6e-10100Show/hide
Query:  MGPHAVDSAIEEVGTSKTPISKQVKQSLHQSALLEEI
        MGPHAVDSAIEEVGTSKTPISKQVKQSLHQSALLEEI
Subjt:  MGPHAVDSAIEEVGTSKTPISKQVKQSLHQSALLEEI

A0A5A7VGI3 Uncharacterized protein3.8e-0757.38Show/hide
Query:  MGPHAVDSAIEEVGTSKTPISKQVKQSLHQSALLEEI--------LLHPKEMPALKNTYRR
        M PH VDS I+EVGTSKTPISK +++ LH S LL+EI        +LHPKEM  LK  Y R
Subjt:  MGPHAVDSAIEEVGTSKTPISKQVKQSLHQSALLEEI--------LLHPKEMPALKNTYRR

A0A5D3BU95 Uncharacterized protein2.4e-0682.86Show/hide
Query:  PHAVDSAIEEVGTSKTPISKQVKQSLHQSALLEEI
        PHA+DSAIEEVGTSKTP+SK  +QSLH SALLEEI
Subjt:  PHAVDSAIEEVGTSKTPISKQVKQSLHQSALLEEI

A0A5D3BWZ9 Uncharacterized protein3.6e-10100Show/hide
Query:  MGPHAVDSAIEEVGTSKTPISKQVKQSLHQSALLEEI
        MGPHAVDSAIEEVGTSKTPISKQVKQSLHQSALLEEI
Subjt:  MGPHAVDSAIEEVGTSKTPISKQVKQSLHQSALLEEI

A0A5D3BZ74 Uncharacterized protein4.3e-1165.62Show/hide
Query:  VDSAIEEVGTSKTPISKQVKQSLHQSALLEEI--------LLHPKEMPALKNTYRRSTRHMLPL
        +DS IE VGTSKTP+SK  +QSL  S+LLEEI        +LHPKEMPALKN YRRS R MLPL
Subjt:  VDSAIEEVGTSKTPISKQVKQSLHQSALLEEI--------LLHPKEMPALKNTYRRSTRHMLPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACCTCATGCAGTTGATTCGGCCATTGAGGAAGTTGGTACCTCAAAGACTCCCATCTCTAAACAAGTCAAACAGTCCTTACATCAATCTGCTCTTCTCGAGGAGAT
TCTCCTCCATCCAAAGGAGATGCCTGCCCTAAAGAACACTTACAGAAGGTCAACTCGACACATGCTCCCCTTAACTGTTCTGAATCGCCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGACCTCATGCAGTTGATTCGGCCATTGAGGAAGTTGGTACCTCAAAGACTCCCATCTCTAAACAAGTCAAACAGTCCTTACATCAATCTGCTCTTCTCGAGGAGAT
TCTCCTCCATCCAAAGGAGATGCCTGCCCTAAAGAACACTTACAGAAGGTCAACTCGACACATGCTCCCCTTAACTGTTCTGAATCGCCTTTAG
Protein sequenceShow/hide protein sequence
MGPHAVDSAIEEVGTSKTPISKQVKQSLHQSALLEEILLHPKEMPALKNTYRRSTRHMLPLTVLNRL