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IVF0025597 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025597
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon gag protein
Genome locationchr07:12932157..12932348
RNA-Seq ExpressionIVF0025597
SyntenyIVF0025597
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]5.43e-2673.02Show/hide
Query:  MTFQQRDKENLINTWRRFKRIKKACAHHCIPECVLMEQFYFGLSEDTQQTTDVVFVGGMLRSS
        MTF+QRD+ENLI+ W+RFKR+ K C HHCIPECVLMEQFYFGLS++T Q+ ++VF GGMLRSS
Subjt:  MTFQQRDKENLINTWRRFKRIKKACAHHCIPECVLMEQFYFGLSEDTQQTTDVVFVGGMLRSS

KAA0049658.1 uncharacterized protein E6C27_scaffold163G001290 [Cucumis melo var. makuwa]5.32e-2271.93Show/hide
Query:  MTFQQRDKENLINTWRRFKRIKKACAHHCIPECVLMEQFYFGLSEDTQQTTDVVFVG
        MTF+QRD +NLI+ W RFKR  K C HHCI ECVLMEQFYFGLSEDTQQ+ D +F G
Subjt:  MTFQQRDKENLINTWRRFKRIKKACAHHCIPECVLMEQFYFGLSEDTQQTTDVVFVG

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]2.97e-2268.25Show/hide
Query:  MTFQQRDKENLINTWRRFKRIKKACAHHCIPECVLMEQFYFGLSEDTQQTTDVVFVGGMLRSS
        M F+QRDKEN+ +TW RFKR+ KAC  H IPECV ME FYFGLS+DT Q  + +FVGGMLRSS
Subjt:  MTFQQRDKENLINTWRRFKRIKKACAHHCIPECVLMEQFYFGLSEDTQQTTDVVFVGGMLRSS

TYJ96998.1 hypothetical protein E5676_scaffold506G00480 [Cucumis melo var. makuwa]3.83e-2467.21Show/hide
Query:  MTFQQRDKENLINTWRRFKRIKKACAHHCIPECVLMEQFYFGLSEDTQQTTDVVFVGGMLR
        M  +Q+D ENLIN WRRFKR+ K C HH IP C+LMEQ YFGLS+DTQQ+ DVV +GG+LR
Subjt:  MTFQQRDKENLINTWRRFKRIKKACAHHCIPECVLMEQFYFGLSEDTQQTTDVVFVGGMLR

TYK21909.1 hypothetical protein E5676_scaffold494G00470 [Cucumis melo var. makuwa]4.14e-2066.1Show/hide
Query:  QRDKENLINTWRRFKRIKKACAHHCIPECVLMEQFYFGLSEDTQQTTDVVFVGGMLRSS
        +RD ENLI+ WR+ K + K C+HH I  CVL EQFYFGLS+DTQQ  D VF GGMLRSS
Subjt:  QRDKENLINTWRRFKRIKKACAHHCIPECVLMEQFYFGLSEDTQQTTDVVFVGGMLRSS

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein4.2e-1668.25Show/hide
Query:  MTFQQRDKENLINTWRRFKRIKKACAHHCIPECVLMEQFYFGLSEDTQQTTDVVFVGGMLRSS
        M F+QRDKEN+ +TW RFKR+ KAC  H IPECV ME FYFGLS+DT Q  + +FVGGMLRSS
Subjt:  MTFQQRDKENLINTWRRFKRIKKACAHHCIPECVLMEQFYFGLSEDTQQTTDVVFVGGMLRSS

A0A5A7TUE1 Uncharacterized protein3.0e-1465.57Show/hide
Query:  FQQRDKENLINTWRRFKRIKKACAHHCIPECVLMEQFYFGLSEDTQQTTDVVFVGGMLRSS
        F+ RD+ENL + W   KR+ KAC HH I +CVLME+FYF LSED QQT DVVFVGG+LR+S
Subjt:  FQQRDKENLINTWRRFKRIKKACAHHCIPECVLMEQFYFGLSEDTQQTTDVVFVGGMLRSS

A0A5D3BFN1 Uncharacterized protein6.4e-1767.21Show/hide
Query:  MTFQQRDKENLINTWRRFKRIKKACAHHCIPECVLMEQFYFGLSEDTQQTTDVVFVGGMLR
        M  +Q+D ENLIN WRRFKR+ K C HH IP C+LMEQ YFGLS+DTQQ+ DVV +GG+LR
Subjt:  MTFQQRDKENLINTWRRFKRIKKACAHHCIPECVLMEQFYFGLSEDTQQTTDVVFVGGMLR

A0A5D3CC26 Uncharacterized protein2.1e-2073.02Show/hide
Query:  MTFQQRDKENLINTWRRFKRIKKACAHHCIPECVLMEQFYFGLSEDTQQTTDVVFVGGMLRSS
        MTF+QRD+ENLI+ W+RFKR+ K C HHCIPECVLMEQFYFGLS++T Q+ ++VF GGMLRSS
Subjt:  MTFQQRDKENLINTWRRFKRIKKACAHHCIPECVLMEQFYFGLSEDTQQTTDVVFVGGMLRSS

A0A5D3D677 Uncharacterized protein2.4e-1671.93Show/hide
Query:  MTFQQRDKENLINTWRRFKRIKKACAHHCIPECVLMEQFYFGLSEDTQQTTDVVFVG
        MTF+QRD +NLI+ W RFKR  K C HHCI ECVLMEQFYFGLSEDTQQ+ D +F G
Subjt:  MTFQQRDKENLINTWRRFKRIKKACAHHCIPECVLMEQFYFGLSEDTQQTTDVVFVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTTCCAGCAAAGAGATAAAGAGAACCTGATAAACACGTGGAGAAGATTTAAGAGAATTAAAAAGGCATGTGCCCATCATTGCATTCCTGAATGTGTGCTGATGGA
GCAATTTTATTTTGGGCTAAGTGAGGATACACAACAGACCACTGATGTTGTATTCGTAGGTGGGATGCTTAGAAGCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCTTCCAGCAAAGAGATAAAGAGAACCTGATAAACACGTGGAGAAGATTTAAGAGAATTAAAAAGGCATGTGCCCATCATTGCATTCCTGAATGTGTGCTGATGGA
GCAATTTTATTTTGGGCTAAGTGAGGATACACAACAGACCACTGATGTTGTATTCGTAGGTGGGATGCTTAGAAGCTCTTAA
Protein sequenceShow/hide protein sequence
MTFQQRDKENLINTWRRFKRIKKACAHHCIPECVLMEQFYFGLSEDTQQTTDVVFVGGMLRSS