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IVF0025620 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025620
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr03:14829223..14829414
RNA-Seq ExpressionIVF0025620
SyntenyIVF0025620
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047191.1 reverse transcriptase [Cucumis melo var. makuwa]3.78e-38100Show/hide
Query:  MAACISKLYQEVNNHLDLANGSYKMATNSHKHFKEYQVDNLVMVYLCKSRLPADHHSKMTNAH
        MAACISKLYQEVNNHLDLANGSYKMATNSHKHFKEYQVDNLVMVYLCKSRLPADHHSKMTNAH
Subjt:  MAACISKLYQEVNNHLDLANGSYKMATNSHKHFKEYQVDNLVMVYLCKSRLPADHHSKMTNAH

KAA0047635.1 hypothetical protein E6C27_scaffold115G001170 [Cucumis melo var. makuwa]2.10e-1972.13Show/hide
Query:  MAACISKLYQEVNNHLDLANGSYKMATNSHKHFKEYQVDNLVMVYLCKSRLPADHHSKMTN
        MA  ISKL Q+V NHL+LAN SYK A NSHK  KEYQV +LVM YL KSR PA HHSKMTN
Subjt:  MAACISKLYQEVNNHLDLANGSYKMATNSHKHFKEYQVDNLVMVYLCKSRLPADHHSKMTN

KAA0063264.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]6.08e-1972.88Show/hide
Query:  ISKLYQEVNNHLDLANGSYKMATNSHKHFKEYQVDNLVMVYLCKSRLPADHHSKMTNAH
        I KL+QEV NHL+LAN SYK ATN+HK  KEYQV +LVMVYL KSR P+ HHSKMTN H
Subjt:  ISKLYQEVNNHLDLANGSYKMATNSHKHFKEYQVDNLVMVYLCKSRLPADHHSKMTNAH

TYK11579.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.08e-2683.61Show/hide
Query:  MAACISKLYQEVNNHLDLANGSYKMATNSHKHFKEYQVDNLVMVYLCKSRLPADHHSKMTN
        MA  ISKLYQE+ NHL+L N SYKMATNSHKHFKEYQV +LVMVYL KSRLPADHHSKMTN
Subjt:  MAACISKLYQEVNNHLDLANGSYKMATNSHKHFKEYQVDNLVMVYLCKSRLPADHHSKMTN

TYK28638.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]8.61e-2068.85Show/hide
Query:  MAACISKLYQEVNNHLDLANGSYKMATNSHKHFKEYQVDNLVMVYLCKSRLPADHHSKMTN
        MA  ISKL+QEV +HL+LAN SYK   NSHK F+EYQV +LVMVYL KSR P  HHSK+TN
Subjt:  MAACISKLYQEVNNHLDLANGSYKMATNSHKHFKEYQVDNLVMVYLCKSRLPADHHSKMTN

TrEMBL top hitse value%identityAlignment
A0A5A7U0R9 Reverse transcriptase7.3e-29100Show/hide
Query:  MAACISKLYQEVNNHLDLANGSYKMATNSHKHFKEYQVDNLVMVYLCKSRLPADHHSKMTNAH
        MAACISKLYQEVNNHLDLANGSYKMATNSHKHFKEYQVDNLVMVYLCKSRLPADHHSKMTNAH
Subjt:  MAACISKLYQEVNNHLDLANGSYKMATNSHKHFKEYQVDNLVMVYLCKSRLPADHHSKMTNAH

A0A5D3C8T7 Uncharacterized protein3.9e-1472.13Show/hide
Query:  MAACISKLYQEVNNHLDLANGSYKMATNSHKHFKEYQVDNLVMVYLCKSRLPADHHSKMTN
        MA  ISKL Q+V NHL+LAN SYK A NSHK  KEYQV +LVM YL KSR PA HHSKMTN
Subjt:  MAACISKLYQEVNNHLDLANGSYKMATNSHKHFKEYQVDNLVMVYLCKSRLPADHHSKMTN

A0A5D3CMX2 DNA/RNA polymerases superfamily protein6.2e-2083.61Show/hide
Query:  MAACISKLYQEVNNHLDLANGSYKMATNSHKHFKEYQVDNLVMVYLCKSRLPADHHSKMTN
        MA  ISKLYQE+ NHL+L N SYKMATNSHKHFKEYQV +LVMVYL KSRLPADHHSKMTN
Subjt:  MAACISKLYQEVNNHLDLANGSYKMATNSHKHFKEYQVDNLVMVYLCKSRLPADHHSKMTN

A0A5D3DYV8 DNA/RNA polymerases superfamily protein2.3e-1468.85Show/hide
Query:  MAACISKLYQEVNNHLDLANGSYKMATNSHKHFKEYQVDNLVMVYLCKSRLPADHHSKMTN
        MA  ISKL+QEV +HL+LAN SYK   NSHK F+EYQV +LVMVYL KSR P  HHSK+TN
Subjt:  MAACISKLYQEVNNHLDLANGSYKMATNSHKHFKEYQVDNLVMVYLCKSRLPADHHSKMTN

A0A5D3E798 Transposon Ty3-G Gag-Pol polyprotein3.0e-1472.88Show/hide
Query:  ISKLYQEVNNHLDLANGSYKMATNSHKHFKEYQVDNLVMVYLCKSRLPADHHSKMTNAH
        I KL+QEV NHL+LAN SYK ATN+HK  KEYQV +LVMVYL KSR P+ HHSKMTN H
Subjt:  ISKLYQEVNNHLDLANGSYKMATNSHKHFKEYQVDNLVMVYLCKSRLPADHHSKMTNAH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTTGCATTTCCAAGTTGTACCAAGAAGTAAATAATCACCTAGACCTCGCTAATGGTTCTTACAAAATGGCTACCAACTCTCACAAGCATTTTAAGGAGTATCA
AGTGGATAACCTTGTTATGGTATATCTCTGCAAATCACGTCTTCCTGCTGATCATCATTCTAAAATGACTAACGCGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCTTGCATTTCCAAGTTGTACCAAGAAGTAAATAATCACCTAGACCTCGCTAATGGTTCTTACAAAATGGCTACCAACTCTCACAAGCATTTTAAGGAGTATCA
AGTGGATAACCTTGTTATGGTATATCTCTGCAAATCACGTCTTCCTGCTGATCATCATTCTAAAATGACTAACGCGCATTGA
Protein sequenceShow/hide protein sequence
MAACISKLYQEVNNHLDLANGSYKMATNSHKHFKEYQVDNLVMVYLCKSRLPADHHSKMTNAH