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IVF0025643 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025643
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionOxysterol-binding protein-related protein 4B-like
Genome locationchr02:19157034..19157483
RNA-Seq ExpressionIVF0025643
SyntenyIVF0025643
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058273.1 oxysterol-binding protein-related protein 4B-like [Cucumis melo var. makuwa]3.18e-107100Show/hide
Query:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRF
        MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRF
Subjt:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRF

Query:  DSCGSQCELMAESSCKDRSSPVGESSGQWRLGCGPWRINPIKIGMGRRV
        DSCGSQCELMAESSCKDRSSPVGESSGQWRLGCGPWRINPIKIGMGRRV
Subjt:  DSCGSQCELMAESSCKDRSSPVGESSGQWRLGCGPWRINPIKIGMGRRV

KAG6587751.1 hypothetical protein SDJN03_16316, partial [Cucurbita argyrosperma subsp. sororia]9.02e-4357.69Show/hide
Query:  SSR-FYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDS
        SSR +YYRRTTEGVPFQWEMQPGTPK +PP TE +   I+PPPA LSL   KP R  Q KQSLF+LF PWRKQ K +    K+ C  D  ++  R RF S
Subjt:  SSR-FYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDS

Query:  CGSQCELMAESSCKDRSS---------PVGESSGQWRLGCGPWRINPIKIGMGRRV
        CGSQCE + +S C+ +SS         P  ESS   RLGCGPWRINP++I +GRRV
Subjt:  CGSQCELMAESSCKDRSS---------PVGESSGQWRLGCGPWRINPIKIGMGRRV

XP_004146363.1 uncharacterized protein LOC101210202 [Cucumis sativus]5.10e-9389.93Show/hide
Query:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRF
        MSRSSRFYYRRTTEGVPFQWEMQPGTPK+NPPLTEVI PPISPPPAVLSLG SKPVR VQNKQ LFVLFGPWRKQPKPKPK  KNPCPLDLN  NERLRF
Subjt:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRF

Query:  DSCGSQCELMAESSCKDRSSPVGESSGQWRLGCGPWRINPIKIGMGRRV
        DSCGSQCELMAESSCK +S+P G SSG WRLGCGPWRINPIKIGMGRRV
Subjt:  DSCGSQCELMAESSCKDRSSPVGESSGQWRLGCGPWRINPIKIGMGRRV

XP_023007086.1 uncharacterized protein LOC111499680 [Cucurbita maxima]3.07e-4358.06Show/hide
Query:  SSR-FYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDS
        SSR +YYRRTTEGVPFQWEMQPGTPK +PP TE +   I+PPPA LSL   KP R    KQSLF+LF PWRKQ K K    K+ C  D  ++  R RF S
Subjt:  SSR-FYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDS

Query:  CGSQCELMAESSCKDRSS--------PVGESSGQWRLGCGPWRINPIKIGMGRRV
        CGSQCE + +S C+ +SS        P  ESS   RLGCGPWRINP++I +GRRV
Subjt:  CGSQCELMAESSCKDRSS--------PVGESSGQWRLGCGPWRINPIKIGMGRRV

XP_038878338.1 uncharacterized protein LOC120070597 [Benincasa hispida]2.60e-7877.85Show/hide
Query:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRF
        MSRSSRFYYRRTTEGVPFQWEMQPGTPK+ PPLT+V+PPPISPPPA+LSL  SKP R VQNKQ LFVLFGPW KQ KPK    KNPCPLD N + ERLRF
Subjt:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRF

Query:  DSCGSQCELMAESSCKDRSSPVGESSGQWRLGCGPWRINPIKIGMGRRV
        DSCGS CE M ESSCK +S    ESSG WR+GCGPWRINPIKI  GRRV
Subjt:  DSCGSQCELMAESSCKDRSSPVGESSGQWRLGCGPWRINPIKIGMGRRV

TrEMBL top hitse value%identityAlignment
A0A0A0LUL8 Uncharacterized protein2.2e-7189.93Show/hide
Query:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRF
        MSRSSRFYYRRTTEGVPFQWEMQPGTPK+NPPLTEVI PPISPPPAVLSLG SKPVR VQNKQ LFVLFGPWRKQ  PKPKPKKNPCPLDLN  NERLRF
Subjt:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRF

Query:  DSCGSQCELMAESSCKDRSSPVGESSGQWRLGCGPWRINPIKIGMGRRV
        DSCGSQCELMAESSCK +S+P G SSG WRLGCGPWRINPIKIGMGRRV
Subjt:  DSCGSQCELMAESSCKDRSSPVGESSGQWRLGCGPWRINPIKIGMGRRV

A0A540N405 Uncharacterized protein8.3e-1540.46Show/hide
Query:  SSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPV---RVVQNKQSLFVL--FGPWRKQPKPKPKPKKNPCPLDLNKNNERL
        SSR YY R+TEGVPF WEMQPGTP+ NPP  E I PPISPPPAVLSLG  KP    ++  NK     L     W K+ K K + K N   L  N   ++ 
Subjt:  SSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPV---RVVQNKQSLFVL--FGPWRKQPKPKPKPKKNPCPLDLNKNNERL

Query:  -RFDSCGSQCELMAESSCKDRSSPVGESSGQWRLG---------------------CGPWRINPIKIGMGRRV
         + D C S  E MA SS    SS    SS  +  G                     C PW+++       RRV
Subjt:  -RFDSCGSQCELMAESSCKDRSSPVGESSGQWRLG---------------------CGPWRINPIKIGMGRRV

A0A5D3CJV8 Oxysterol-binding protein-related protein 4B-like4.6e-82100Show/hide
Query:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRF
        MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRF
Subjt:  MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRF

Query:  DSCGSQCELMAESSCKDRSSPVGESSGQWRLGCGPWRINPIKIGMGRRV
        DSCGSQCELMAESSCKDRSSPVGESSGQWRLGCGPWRINPIKIGMGRRV
Subjt:  DSCGSQCELMAESSCKDRSSPVGESSGQWRLGCGPWRINPIKIGMGRRV

A0A6J1EQV3 uncharacterized protein LOC1114366868.9e-3356.49Show/hide
Query:  SSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDSC
        S  +YYRRTTEGVPFQWEMQPGTPK +PP TE +   I+PPPA LSL   KP R    KQSLF+LF PWRKQ     K +K+ C  D    + R RF SC
Subjt:  SSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDSC

Query:  GSQCELMAESSCKDRSS--------PVGESSGQWRLGCGPWRINPIKIGMGRRV
        GSQCE + +S C+ +SS        P  ESS   RLGCGPWRINP++I +GRRV
Subjt:  GSQCELMAESSCKDRSS--------PVGESSGQWRLGCGPWRINPIKIGMGRRV

A0A6J1KZJ1 uncharacterized protein LOC1114996803.0e-3357.14Show/hide
Query:  SSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDSC
        S  +YYRRTTEGVPFQWEMQPGTPK +PP TE +   I+PPPA LSL   KP R    KQSLF+LF PWRKQ     K KK+ C  D    + R RF SC
Subjt:  SSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDSC

Query:  GSQCELMAESSCKDRSS--------PVGESSGQWRLGCGPWRINPIKIGMGRRV
        GSQCE + +S C+ +SS        P  ESS   RLGCGPWRINP++I +GRRV
Subjt:  GSQCELMAESSCKDRSS--------PVGESSGQWRLGCGPWRINPIKIGMGRRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G25845.1 BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2)4.7e-1052.17Show/hide
Query:  MSRSSR--FYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKP-VRVVQNKQSLF
        +SR+S   +Y  R  EGVPF+WEMQPGTP +  P  EV+ PP+SPPPA+LSLG  KP + + + K  +F
Subjt:  MSRSSR--FYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKP-VRVVQNKQSLF

AT4G25850.2 OSBP(oxysterol binding protein)-related protein 4B4.7e-1052.17Show/hide
Query:  MSRSSR--FYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKP-VRVVQNKQSLF
        +SR+S   +Y  R  EGVPF+WEMQPGTP +  P  EV+ PP+SPPPA+LSLG  KP + + + K  +F
Subjt:  MSRSSR--FYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKP-VRVVQNKQSLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCGTTCCTCTAGATTCTACTATAGAAGAACAACCGAAGGTGTTCCATTTCAATGGGAGATGCAACCGGGAACTCCCAAGAGTAATCCGCCGCTCACGGAGGTGAT
TCCGCCGCCGATCAGCCCTCCGCCGGCGGTGCTCAGCCTTGGTTTCTCGAAGCCGGTGAGGGTTGTTCAGAATAAACAATCGTTGTTTGTGTTATTTGGGCCGTGGAGGA
AGCAGCCCAAGCCCAAGCCCAAGCCCAAGAAGAATCCTTGTCCGTTGGATCTTAATAAGAACAACGAGCGGCTGAGATTTGACTCGTGTGGGTCCCAGTGTGAGTTAATG
GCAGAATCTTCGTGTAAAGATAGATCTTCACCGGTGGGGGAATCTTCCGGTCAGTGGCGGCTGGGATGCGGCCCGTGGAGGATCAACCCAATTAAAATAGGTATGGGAAG
GCGAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTCGTTCCTCTAGATTCTACTATAGAAGAACAACCGAAGGTGTTCCATTTCAATGGGAGATGCAACCGGGAACTCCCAAGAGTAATCCGCCGCTCACGGAGGTGAT
TCCGCCGCCGATCAGCCCTCCGCCGGCGGTGCTCAGCCTTGGTTTCTCGAAGCCGGTGAGGGTTGTTCAGAATAAACAATCGTTGTTTGTGTTATTTGGGCCGTGGAGGA
AGCAGCCCAAGCCCAAGCCCAAGCCCAAGAAGAATCCTTGTCCGTTGGATCTTAATAAGAACAACGAGCGGCTGAGATTTGACTCGTGTGGGTCCCAGTGTGAGTTAATG
GCAGAATCTTCGTGTAAAGATAGATCTTCACCGGTGGGGGAATCTTCCGGTCAGTGGCGGCTGGGATGCGGCCCGTGGAGGATCAACCCAATTAAAATAGGTATGGGAAG
GCGAGTTTAG
Protein sequenceShow/hide protein sequence
MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQNKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDSCGSQCELM
AESSCKDRSSPVGESSGQWRLGCGPWRINPIKIGMGRRV