; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0025647 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025647
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein transport protein Sec61 subunit beta
Genome locationchr11:25057876..25058607
RNA-Seq ExpressionIVF0025647
SyntenyIVF0025647
Gene Ontology termsGO:0006616 - SRP-dependent cotranslational protein targeting to membrane, translocation (biological process)
GO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0005784 - Sec61 translocon complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR016482 - Protein transport protein SecG/Sec61-beta/Sbh
IPR030671 - Protein transport Sec61-beta/Sbh


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149541.1 protein transport protein Sec61 subunit beta [Cucumis sativus]1.38e-6499.08Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSA+ASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

XP_008463929.1 PREDICTED: protein transport protein Sec61 subunit beta [Cucumis melo]3.38e-65100Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

XP_022140347.1 protein transport protein Sec61 subunit beta [Momordica charantia]4.82e-5184.4Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARG SQSQS++SS  T+RPGV APRGSAAATAGLRRRR  ST +  S G+VG GSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARS AGV
Subjt:  YRARSAAGV

XP_022958107.1 protein transport protein Sec61 subunit beta [Cucurbita moschata]2.13e-5488.07Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARG SQSQS++SS  T+RPGVVAPRGSAAATAGLRRRR GSTS   +TGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

XP_038902812.1 protein transport protein Sec61 subunit beta [Benincasa hispida]4.00e-5993.58Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARG SQSQS++SS  T+RPGVVAPRGSAAATAGLRRRRPGSTSA ASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

TrEMBL top hitse value%identityAlignment
A0A0A0KHR1 Protein transport protein Sec61 subunit beta3.5e-4799.08Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSA+ASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

A0A1S3CKE5 Protein transport protein Sec61 subunit beta1.2e-47100Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

A0A5D3CTD4 Protein transport protein Sec61 subunit beta1.2e-47100Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

A0A6J1H102 Protein transport protein Sec61 subunit beta1.6e-3988.07Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARG SQSQS++S  ST+RPGVVAPRGSAAATAGLRRRR GSTS   +TGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

A0A6J1JZ65 Protein transport protein Sec61 subunit beta1.6e-3988.07Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARG SQSQS++S  ST+RPGVVAPRGSAAATAGLRRRR GSTS   +TGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKL
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

SwissProt top hitse value%identityAlignment
A8I6P9 Protein transport protein Sec61 subunit beta4.5e-0745.74Show/hide
Query:  SQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGK
        SQSQ+ST      R    AP G+    AG  RRRP   S  + T      +      + FYTDD PG K+SP VV+ MSL FI FVT LHV GK
Subjt:  SQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGK

P38389 Protein transport protein Sec61 subunit beta4.8e-1765.38Show/hide
Query:  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

P60467 Protein transport protein Sec61 subunit beta7.7e-0743.62Show/hide
Query:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA
        S T+ GS+ R    A   +A A     R+R  ++  T S G     S+G G M RFYT+D+PGLK+ P  VLVMSL FI  V  LH++GK  R+
Subjt:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA

P60468 Protein transport protein Sec61 subunit beta7.7e-0743.62Show/hide
Query:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA
        S T+ GS+ R    A   +A A     R+R  ++  T S G     S+G G M RFYT+D+PGLK+ P  VLVMSL FI  V  LH++GK  R+
Subjt:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA

Q9CQS8 Protein transport protein Sec61 subunit beta7.7e-0743.62Show/hide
Query:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA
        S T+ GS+ R    A   +A A     R+R  ++  T S G     S+G G M RFYT+D+PGLK+ P  VLVMSL FI  V  LH++GK  R+
Subjt:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA

Arabidopsis top hitse value%identityAlignment
AT2G45070.1 Preprotein translocase Sec, Sec61-beta subunit protein3.4e-1865.38Show/hide
Query:  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

AT2G45070.2 Preprotein translocase Sec, Sec61-beta subunit protein3.4e-1865.38Show/hide
Query:  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

AT2G45070.3 Preprotein translocase Sec, Sec61-beta subunit protein3.4e-1865.38Show/hide
Query:  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

AT2G45070.4 Preprotein translocase Sec, Sec61-beta subunit protein3.4e-1865.38Show/hide
Query:  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

AT5G60460.1 Preprotein translocase Sec, Sec61-beta subunit protein3.2e-3274.07Show/hide
Query:  MARGASQSQSSTSSG-STARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGK
        MARG+SQSQ STS+G STARPG+ APRGSAAATAG+RRRR G     +S G  G G SG  NMLRFYTDDAPGLKISPTVVL+MSLCFIGFVT LHVFGK
Subjt:  MARGASQSQSSTSSG-STARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGK

Query:  LYRARSAA
        LY  +S +
Subjt:  LYRARSAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGAGGCGCTTCTCAATCCCAATCCTCAACCTCCTCTGGCTCTACCGCTAGACCTGGCGTTGTCGCTCCTCGCGGCTCTGCGGCGGCCACAGCTGGCCTCCGCCG
CCGCCGTCCCGGCTCTACTTCTGCCACCGCCTCTACTGGACTCGTAGGCGGCGGATCAAGCGGCGGCGGAAACATGCTGAGATTCTACACTGACGATGCTCCAGGCTTAA
AGATTTCTCCCACTGTCGTCCTCGTCATGAGCCTCTGCTTCATCGGCTTCGTCACCGGCCTCCACGTCTTTGGTAAGCTCTACCGTGCACGATCCGCCGCTGGAGTTTAA
mRNA sequenceShow/hide mRNA sequence
AATTTCCCACCATTTTTCTCCCAAATTCACATACTTCCGATCATCTTCTCCGATTCCCAAATCCATGGCAAGAGGCGCTTCTCAATCCCAATCCTCAACCTCCTCTGGCT
CTACCGCTAGACCTGGCGTTGTCGCTCCTCGCGGCTCTGCGGCGGCCACAGCTGGCCTCCGCCGCCGCCGTCCCGGCTCTACTTCTGCCACCGCCTCTACTGGACTCGTA
GGCGGCGGATCAAGCGGCGGCGGAAACATGCTGAGATTCTACACTGACGATGCTCCAGGCTTAAAGATTTCTCCCACTGTCGTCCTCGTCATGAGCCTCTGCTTCATCGG
CTTCGTCACCGGCCTCCACGTCTTTGGTAAGCTCTACCGTGCACGATCCGCCGCTGGAGTTTAATTCTATGCTCATTTTGTTTACCGTGCTTTTTCCCTTCCCGATCTTT
TCATTTCCTAGATTAAATGTTCAAGTATCTCTGTAAATTTCACAATCGTTGTTGTACTTTCTTGAGTTTTCAATTCCATCACTGTTGTTGACGTATCAAAGGGAGCAAGA
TCGTTCTTTAGCTGATAATTTCTCTTTAGATCAATCTAGTTCTTGTGAATGATGCGGATTGCAGGGTTTCTTCTTTTTCGTCTCGATATTGAGTTTATTCTATTTCTCAC
TCAAATTTGTGCTTTATATGGTATGAAGATTAGCTGTTTCTTCTAGATTTTGATTTGGATGAGTTAGTGGGG
Protein sequenceShow/hide protein sequence
MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV