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IVF0025659 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025659
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr01:11285731..11286369
RNA-Seq ExpressionIVF0025659
SyntenyIVF0025659
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040709.1 hypothetical protein E6C27_scaffold529G00290 [Cucumis melo var. makuwa]5.03e-8280.61Show/hide
Query:  MSSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRHNYTWFIPTQVNITDSKGNIFMVQTVSYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAKKYSF
        MS+YKQIGDACGGL+EVSKS MRK  LIEVRLKIRHNYT  I  Q+NITD+K NIF VQT+SY EGRWFKERNANIHGSFTRQ  L+FNEFDFEAK+YSF
Subjt:  MSSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRHNYTWFIPTQVNITDSKGNIFMVQTVSYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAKKYSF

Query:  MGFVATPPEKREKKPKKAHNNSQNSNERPTISNSPDSTFKAIIISDNSDGGRGSDGRLKSVISGK
        M F ATPP+K EKKPKK   NS+NSNERP+ISNS DST KAIIISDNSDGGRGSD RLKSVIS K
Subjt:  MGFVATPPEKREKKPKKAHNNSQNSNERPTISNSPDSTFKAIIISDNSDGGRGSDGRLKSVISGK

KAA0047508.1 putative amidohydrolase ytcJ [Cucumis melo var. makuwa]8.31e-6079.49Show/hide
Query:  MSSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRHNYTWFIPTQVNITDSKGNIFMVQTVSYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAKKYSF
        M+SY+QIGDACGGL+EVSKS MRK DLIEVRLKIRHNYT FIP Q+NI DSKGNIF +QTVS+ E RWFKERNANIH  FTRQ  LEFNEFDFEA+KYSF
Subjt:  MSSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRHNYTWFIPTQVNITDSKGNIFMVQTVSYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAKKYSF

Query:  MGFVATPPEKREKKPKK
        MGFV TPP+K++KK KK
Subjt:  MGFVATPPEKREKKPKK

KAA0063660.1 hypothetical protein E6C27_scaffold329G001750 [Cucumis melo var. makuwa]5.24e-3136.64Show/hide
Query:  MSSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRHNYTWFIPTQVNITDSKGNIFMVQTVSYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAKKYSF
        M + +QIG ACGGL++V++      +LIE +LKIR+NY+ F+P  V I D +GN F++QT+++ EG+W  ERN  +HG+F RQ    F+EF+ +++++ F
Subjt:  MSSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRHNYTWFIPTQVNITDSKGNIFMVQTVSYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAKKYSF

Query:  MGFVATPPEKREKKPKKAHNNSQNSNERPTISNSPDSTFKAIII-----------------SDNSDGGRG--SDGRLKSVISG--KMDKGKGIIVFNDNQ
         G  A  P+ +          +  S  R +IS    ST K++II                 +DNS       S G++   IS    +DKGK  +      
Subjt:  MGFVATPPEKREKKPKKAHNNSQNSNERPTISNSPDSTFKAIII-----------------SDNSDGGRG--SDGRLKSVISG--KMDKGKGIIVFNDNQ

Query:  EKKAKF--PKRKVSFPSPKNKTFFYNPETALA
             F  PKRKVSF SP NKT F+NP++A A
Subjt:  EKKAKF--PKRKVSFPSPKNKTFFYNPETALA

KAA0063733.1 hypothetical protein E6C27_scaffold1290G00140 [Cucumis melo var. makuwa]1.23e-9478.76Show/hide
Query:  MRKIDLIEVRLKIRHNYTWFIPTQVNITDSKGNIFMVQTVSYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAKKYSFMGFVATPPEKREKKPKKAHNN
        MRK DLIEVRLKIRHNY  FIP Q+NI +SKGNIF VQTVS+ EGRWFKERNANIHGSFTRQ  LEFNEFDFEA+KYSFMGFVATPPEK++KKPKK+  +
Subjt:  MRKIDLIEVRLKIRHNYTWFIPTQVNITDSKGNIFMVQTVSYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAKKYSFMGFVATPPEKREKKPKKAHNN

Query:  SQNSNERPTISNSPDSTFKAIIISDNSDGGRGSDGRLKSVISGKMDKGKGIIVFNDNQEK--KAKFPKRKVSFPSPKNKTFFYNPETALAKPL
        SQNSN+RPTISNS DST KAIII +NSDGGR SDGRLK VISG+MDKGKGI+VF + Q++   A FPKRKVSFPSPKNKTFFYNP+ A AK L
Subjt:  SQNSNERPTISNSPDSTFKAIIISDNSDGGRGSDGRLKSVISGKMDKGKGIIVFNDNQEK--KAKFPKRKVSFPSPKNKTFFYNPETALAKPL

TYK07346.1 hypothetical protein E5676_scaffold202G00620 [Cucumis melo var. makuwa]1.33e-7272.73Show/hide
Query:  MRKIDLIEVRLKIRHNYTWFIPTQVNITDSKGNIFMVQTVSYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAKKYSFMGFVATPPEKR--EKKPKKAH
        MRK DLIEVR KIRHNYT FIP Q+ ITDSKGNIF VQTVS+ EGR FKERNANIHGSFTRQ  LEFNEFDF+A+KY FMGFVATPPEK+  EKK KK  
Subjt:  MRKIDLIEVRLKIRHNYTWFIPTQVNITDSKGNIFMVQTVSYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAKKYSFMGFVATPPEKR--EKKPKKAH

Query:  NNSQNSNERPTISNSPDSTFKAIII-SDNSDGGRGSDGRLKSVISGKMDKGKGIIVFNDNQEK--KAKFPKRKVSF
         +S+NSN+RPTISNSPDST KAIII S+N D GRG+DGRLKS+I+ KMDK  GI+VF D  ++  +A FPKRKV +
Subjt:  NNSQNSNERPTISNSPDSTFKAIII-SDNSDGGRGSDGRLKSVISGKMDKGKGIIVFNDNQEK--KAKFPKRKVSF

TrEMBL top hitse value%identityAlignment
A0A5A7THF9 Uncharacterized protein2.3e-6680.61Show/hide
Query:  MSSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRHNYTWFIPTQVNITDSKGNIFMVQTVSYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAKKYSF
        MS+YKQIGDACGGL+EVSKS MRK  LIEVRLKIRHNYT  I  Q+NITD+K NIF VQT+SY EGRWFKERNANIHGSFTRQ  L+FNEFDFEAK+YSF
Subjt:  MSSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRHNYTWFIPTQVNITDSKGNIFMVQTVSYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAKKYSF

Query:  MGFVATPPEKREKKPKKAHNNSQNSNERPTISNSPDSTFKAIIISDNSDGGRGSDGRLKSVISGK
        M F ATPP+K EKKPKK   NS+NSNERP+ISNS DST KAIIISDNSDGGRGSD RLKSVIS K
Subjt:  MGFVATPPEKREKKPKKAHNNSQNSNERPTISNSPDSTFKAIIISDNSDGGRGSDGRLKSVISGK

A0A5A7V6K4 Uncharacterized protein2.4e-7678.76Show/hide
Query:  MRKIDLIEVRLKIRHNYTWFIPTQVNITDSKGNIFMVQTVSYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAKKYSFMGFVATPPEKREKKPKKAHNN
        MRK DLIEVRLKIRHNY  FIP Q+NI +SKGNIF VQTVS+ EGRWFKERNANIHGSFTRQ  LEFNEFDFEA+KYSFMGFVATPPEK++KKPKK+  +
Subjt:  MRKIDLIEVRLKIRHNYTWFIPTQVNITDSKGNIFMVQTVSYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAKKYSFMGFVATPPEKREKKPKKAHNN

Query:  SQNSNERPTISNSPDSTFKAIIISDNSDGGRGSDGRLKSVISGKMDKGKGIIVFNDNQE--KKAKFPKRKVSFPSPKNKTFFYNPETALAKPL
        SQNSN+RPTISNS DST KAIII +NSDGGR SDGRLK VISG+MDKGKGI+VF + Q+  + A FPKRKVSFPSPKNKTFFYNP+ A AK L
Subjt:  SQNSNERPTISNSPDSTFKAIIISDNSDGGRGSDGRLKSVISGKMDKGKGIIVFNDNQE--KKAKFPKRKVSFPSPKNKTFFYNPETALAKPL

A0A5D3CAI5 Uncharacterized protein1.3e-5871.27Show/hide
Query:  MRKIDLIEVRLKIRHNYTWFIPTQVNITDSKGNIFMVQTVSYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAKKYSFMGFVATPPE--KREKKPKKAH
        MRK DLIEVR KIRHNYT FIP Q+ ITDSKGNIF VQTVS+ EGR FKERNANIHGSFTRQ  LEFNEFDF+A+KY FMGFVATPPE  K+EKK KK  
Subjt:  MRKIDLIEVRLKIRHNYTWFIPTQVNITDSKGNIFMVQTVSYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAKKYSFMGFVATPPE--KREKKPKKAH

Query:  NNSQNSNERPTISNSPDSTFKA-IIISDNSDGGRGSDGRLKSVISGKMDKGKGIIVFNDNQE--KKAKFPKRKVSFPSPKN
         +S+NSN+RPTISNSPDST KA IIIS+N D GRG+DGRLKS+I+ KMDK  GI+VF D  +  ++A FPKRKV +    N
Subjt:  NNSQNSNERPTISNSPDSTFKA-IIISDNSDGGRGSDGRLKSVISGKMDKGKGIIVFNDNQE--KKAKFPKRKVSFPSPKN

A0A5D3DLT1 DUF4283 domain-containing protein1.2e-2737.1Show/hide
Query:  MSSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRHNYTWFIPTQVNITDSKGNIFMVQTVSYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAKKYSF
        ++++ QIG+ACGG I+ +   + K++L E  +K++ NYT F+P  + I D +G  F+VQT+++PEG+W +ERN ++HGSFT+    +FNEF+  A++Y+F
Subjt:  MSSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRHNYTWFIPTQVNITDSKGNIFMVQTVSYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAKKYSF

Query:  ---MGFVATP--PEKREKKPKKAHNNSQNSNERPTISNSPDS-TFKAIIISDNSDGGRGSDGRLKSVISGKM---DKGKGIIVFNDNQEKKAKFPKRKVS
              +A P  PE   KK  K  NN +      TI     S +F  +    +SD    S+   K     +M    KGK I     NQ+      KRKVS
Subjt:  ---MGFVATP--PEKREKKPKKAHNNSQNSNERPTISNSPDS-TFKAIIISDNSDGGRGSDGRLKSVISGKM---DKGKGIIVFNDNQEKKAKFPKRKVS

Query:  FPSPKNKTFFYNPETALAKPL
        F SPKN+TF ++  +A  K L
Subjt:  FPSPKNKTFFYNPETALAKPL

A0A5D3DT94 Putative amidohydrolase ytcJ9.0e-4779.49Show/hide
Query:  MSSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRHNYTWFIPTQVNITDSKGNIFMVQTVSYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAKKYSF
        M+SY+QIGDACGGL+EVSKS MRK DLIEVRLKIRHNYT FIP Q+NI DSKGNIF +QTVS+ E RWFKERNANIH  FTRQ  LEFNEFDFEA+KYSF
Subjt:  MSSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRHNYTWFIPTQVNITDSKGNIFMVQTVSYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAKKYSF

Query:  MGFVATPPEKREKKPKK
        MGFV TPP+K++KK KK
Subjt:  MGFVATPPEKREKKPKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTCCTACAAACAGATTGGGGATGCATGTGGAGGGTTAATAGAAGTCTCAAAATCAAAAATGAGAAAGATAGATCTTATTGAAGTTAGACTGAAGATCAGACACAA
CTATACATGGTTCATTCCAACTCAGGTTAACATCACAGACAGCAAAGGTAACATTTTCATGGTCCAAACTGTTTCTTACCCAGAAGGAAGATGGTTCAAAGAAAGAAATG
CAAACATACATGGTTCTTTTACAAGACAAGTTGTCCTAGAATTCAATGAATTTGATTTCGAGGCTAAAAAATACTCTTTCATGGGATTTGTTGCTACACCGCCGGAGAAA
AGAGAAAAAAAGCCGAAAAAAGCTCATAACAACAGCCAAAATAGTAACGAACGTCCGACAATTTCAAACTCACCAGACTCAACTTTCAAGGCCATCATAATCTCTGACAA
CTCTGATGGTGGTAGGGGCAGTGATGGAAGACTCAAATCTGTCATTTCGGGTAAGATGGACAAAGGGAAGGGCATTATAGTCTTTAACGATAACCAAGAAAAGAAGGCAA
AATTTCCAAAGAGGAAAGTCAGCTTCCCCTCTCCAAAAAACAAAACATTCTTCTACAATCCCGAGACTGCCCTAGCCAAACCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTCCTACAAACAGATTGGGGATGCATGTGGAGGGTTAATAGAAGTCTCAAAATCAAAAATGAGAAAGATAGATCTTATTGAAGTTAGACTGAAGATCAGACACAA
CTATACATGGTTCATTCCAACTCAGGTTAACATCACAGACAGCAAAGGTAACATTTTCATGGTCCAAACTGTTTCTTACCCAGAAGGAAGATGGTTCAAAGAAAGAAATG
CAAACATACATGGTTCTTTTACAAGACAAGTTGTCCTAGAATTCAATGAATTTGATTTCGAGGCTAAAAAATACTCTTTCATGGGATTTGTTGCTACACCGCCGGAGAAA
AGAGAAAAAAAGCCGAAAAAAGCTCATAACAACAGCCAAAATAGTAACGAACGTCCGACAATTTCAAACTCACCAGACTCAACTTTCAAGGCCATCATAATCTCTGACAA
CTCTGATGGTGGTAGGGGCAGTGATGGAAGACTCAAATCTGTCATTTCGGGTAAGATGGACAAAGGGAAGGGCATTATAGTCTTTAACGATAACCAAGAAAAGAAGGCAA
AATTTCCAAAGAGGAAAGTCAGCTTCCCCTCTCCAAAAAACAAAACATTCTTCTACAATCCCGAGACTGCCCTAGCCAAACCTCTTTGA
Protein sequenceShow/hide protein sequence
MSSYKQIGDACGGLIEVSKSKMRKIDLIEVRLKIRHNYTWFIPTQVNITDSKGNIFMVQTVSYPEGRWFKERNANIHGSFTRQVVLEFNEFDFEAKKYSFMGFVATPPEK
REKKPKKAHNNSQNSNERPTISNSPDSTFKAIIISDNSDGGRGSDGRLKSVISGKMDKGKGIIVFNDNQEKKAKFPKRKVSFPSPKNKTFFYNPETALAKPL