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IVF0025664 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025664
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr07:13914245..13914806
RNA-Seq ExpressionIVF0025664
SyntenyIVF0025664
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047075.1 retrotransposon protein [Cucumis melo var. makuwa]1.87e-9686.16Show/hide
Query:  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD
        MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGP CSGFGWNDE+KCIV EKE+FDDWVKSHP+AKGLLNKSF HYDE  YVFGKDRATGGRA+SF D
Subjt:  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD

Query:  VGSNNPVGYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRVSERRNVSSGSKQKR
        +GSN+P GYDAF ADA PDT+F PMYS GLNMSPDDLM TR  RVSERRNVSSGSK+KR
Subjt:  VGSNNPVGYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRVSERRNVSSGSKQKR

KAA0050782.1 retrotransposon protein [Cucumis melo var. makuwa]2.97e-9585.53Show/hide
Query:  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD
        MMAFKIPGCNIHASTIDSRIKLMKRMFHALA+MR P CSGFGWNDE+KCI+ EKEVFDDWVKSHP AKGLLNKSF HYDE  YVFGKDRATGGRA+SFAD
Subjt:  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD

Query:  VGSNNPVGYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRVSERRNVSSGSKQKR
        +GSN+P GYDAF AD   DTDFPPMYS GLNMSPDDLM TR  RVSERRNVSSGSK KR
Subjt:  VGSNNPVGYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRVSERRNVSSGSKQKR

KAA0066570.1 retrotransposon protein [Cucumis melo var. makuwa]2.15e-10194.12Show/hide
Query:  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD
        MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVT KEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD
Subjt:  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD

Query:  VGSNNPVGYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRVSERRNVSS
        VGSNNP GYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRI RV+    VS+
Subjt:  VGSNNPVGYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRVSERRNVSS

TYK05082.1 retrotransposon protein [Cucumis melo var. makuwa]6.54e-9787.42Show/hide
Query:  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD
        MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGP CSGFGWNDE+KCIV EKE+FDDWVKSHP AKGLLNKSF HYDE  YVFGKDRATGGRA+SFAD
Subjt:  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD

Query:  VGSNNPVGYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRVSERRNVSSGSKQKR
        +GSN+P GYDA  ADA PDTDFPPMYS GLNMSPDDLM TR  RVSERRNVSSGSK+KR
Subjt:  VGSNNPVGYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRVSERRNVSSGSKQKR

TYK15304.1 retrotransposon protein [Cucumis melo var. makuwa]7.89e-10496.08Show/hide
Query:  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD
        MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD
Subjt:  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD

Query:  VGSNNPVGYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRVSERRNVSS
        VGSNNPVGYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRV+    VS+
Subjt:  VGSNNPVGYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRVSERRNVSS

TrEMBL top hitse value%identityAlignment
A0A5A7SWD8 Retrotransposon protein1.7e-7487.42Show/hide
Query:  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD
        MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGP CSGFGWNDE+KCIV EKEVFDDW  SHP AKGLLNKSF HYDE  YVFGKDRATGGRA+SFAD
Subjt:  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD

Query:  VGSNNPVGYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRVSERRNVSSGSKQKR
        +GSNNP GYDAF ADA PDTDF PMYS GLNMSPDDLM TR  RVSERRNVSSGSK+KR
Subjt:  VGSNNPVGYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRVSERRNVSSGSKQKR

A0A5A7U098 Retrotransposon protein1.2e-7586.16Show/hide
Query:  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD
        MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGP CSGFGWNDE+KCIV EKE+FDDWVKSHP+AKGLLNKSF HYDE  YVFGKDRATGGRA+SF D
Subjt:  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD

Query:  VGSNNPVGYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRVSERRNVSSGSKQKR
        +GSN+P GYDAF ADA PDT+F PMYS GLNMSPDDLM TR  RVSERRNVSSGSK+KR
Subjt:  VGSNNPVGYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRVSERRNVSSGSKQKR

A0A5A7VHC6 Retrotransposon protein2.3e-7994.12Show/hide
Query:  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD
        MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVT KEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD
Subjt:  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD

Query:  VGSNNPVGYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRVSERRNVSS
        VGSNNP GYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRI RV+    VS+
Subjt:  VGSNNPVGYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRVSERRNVSS

A0A5D3C1M0 Retrotransposon protein5.3e-7687.42Show/hide
Query:  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD
        MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGP CSGFGWNDE+KCIV EKE+FDDWVKSHP AKGLLNKSF HYDE  YVFGKDRATGGRA+SFAD
Subjt:  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD

Query:  VGSNNPVGYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRVSERRNVSSGSKQKR
        +GSN+P GYDA  ADA PDTDFPPMYS GLNMSPDDLM TR  RVSERRNVSSGSK+KR
Subjt:  VGSNNPVGYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRVSERRNVSSGSKQKR

A0A5D3CWJ7 Retrotransposon protein3.2e-8196.08Show/hide
Query:  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD
        MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD
Subjt:  MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD

Query:  VGSNNPVGYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRVSERRNVSS
        VGSNNPVGYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRV+    VS+
Subjt:  VGSNNPVGYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRVSERRNVSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30140.1 unknown protein7.7e-1132.26Show/hide
Query:  GCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD
        GCN +     SR+K +K ++ +  +++    SGFGW+ E K      EV+ D++K+HP  K +  +S  H+++   +FG   ATG  A   +D
Subjt:  GCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFAD

AT2G24960.1 unknown protein4.1e-0425.84Show/hide
Query:  GFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVF------GKDRATGGRAKSFADVGSNNPVGYDAFVADATPDTDF
        GF W++ +  I  +  V+D ++K HP+A+    KS P Y++   +F      G D    G A   ++  ++     D      TP  D+
Subjt:  GFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVF------GKDRATGGRAKSFADVGSNNPVGYDAFVADATPDTDF

AT2G24960.2 unknown protein4.1e-0425.84Show/hide
Query:  GFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVF------GKDRATGGRAKSFADVGSNNPVGYDAFVADATPDTDF
        GF W++ +  I  +  V+D ++K HP+A+    KS P Y++   +F      G D    G A   ++  ++     D      TP  D+
Subjt:  GFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVF------GKDRATGGRAKSFADVGSNNPVGYDAFVADATPDTDF

AT4G02210.1 unknown protein1.4e-0424.18Show/hide
Query:  AFKIPGCNIHA--------STIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVF
        A+K   C+  A          + +R K ++ +F ++  +      GF W+D ++ +V +  V+D+++K HP ++    KS P Y +   V+
Subjt:  AFKIPGCNIHA--------STIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVF

AT4G02210.2 unknown protein1.4e-0424.18Show/hide
Query:  AFKIPGCNIHA--------STIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVF
        A+K   C+  A          + +R K ++ +F ++  +      GF W+D ++ +V +  V+D+++K HP ++    KS P Y +   V+
Subjt:  AFKIPGCNIHA--------STIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGCCTTCAAGATCCCAGGTTGTAATATCCATGCTTCAACGATCGATAGCCGAATCAAATTGATGAAGAGAATGTTCCATGCACTTGCGGAGATGCGTGGCCCAAC
GTGTAGTGGTTTTGGGTGGAATGATGAACAAAAATGCATCGTCACAGAGAAAGAAGTCTTCGACGATTGGGTCAAGAGTCATCCGGTGGCGAAGGGCCTTCTTAATAAGT
CGTTTCCCCACTATGACGAACGATTGTACGTGTTTGGCAAAGATCGTGCAACAGGAGGCCGGGCCAAGAGTTTTGCAGACGTTGGGTCAAACAATCCTGTTGGGTATGAC
GCATTTGTCGCTGACGCTACTCCGGATACGGACTTCCCGCCAATGTACAGTCAGGGATTGAACATGTCGCCTGATGATTTGATGGGAACAAGAATCACTCGGGTCAGTGA
GCGTAGGAATGTTTCAAGCGGGTCTAAGCAAAAACGTGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGCCTTCAAGATCCCAGGTTGTAATATCCATGCTTCAACGATCGATAGCCGAATCAAATTGATGAAGAGAATGTTCCATGCACTTGCGGAGATGCGTGGCCCAAC
GTGTAGTGGTTTTGGGTGGAATGATGAACAAAAATGCATCGTCACAGAGAAAGAAGTCTTCGACGATTGGGTCAAGAGTCATCCGGTGGCGAAGGGCCTTCTTAATAAGT
CGTTTCCCCACTATGACGAACGATTGTACGTGTTTGGCAAAGATCGTGCAACAGGAGGCCGGGCCAAGAGTTTTGCAGACGTTGGGTCAAACAATCCTGTTGGGTATGAC
GCATTTGTCGCTGACGCTACTCCGGATACGGACTTCCCGCCAATGTACAGTCAGGGATTGAACATGTCGCCTGATGATTTGATGGGAACAAGAATCACTCGGGTCAGTGA
GCGTAGGAATGTTTCAAGCGGGTCTAAGCAAAAACGTGCATGA
Protein sequenceShow/hide protein sequence
MMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFADVGSNNPVGYD
AFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRVSERRNVSSGSKQKRA