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IVF0025705 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025705
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr11:22820788..22821120
RNA-Seq ExpressionIVF0025705
SyntenyIVF0025705
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK22885.1 hypothetical protein E5676_scaffold334G00240 [Cucumis melo var. makuwa]1.51e-1374.47Show/hide
Query:  MQRTRVWLRCGLETTWSSCDLRRLAARVLSTWPAIDNYTVNDEDKRR
        MQ  RV L CG ETTWSSCDLR L A V+STWP IDNYTVND+D+RR
Subjt:  MQRTRVWLRCGLETTWSSCDLRRLAARVLSTWPAIDNYTVNDEDKRR
TrEMBL top hitse value%identityAlignment
A0A5D3DH42 Integrase catalytic domain-containing protein1.6e-1074.47Show/hide
Query:  MQRTRVWLRCGLETTWSSCDLRRLAARVLSTWPAIDNYTVNDEDKRR
        MQ  RV L CG ETTWSSCDLR L A V+STWP IDNYTVND+D+RR
Subjt:  MQRTRVWLRCGLETTWSSCDLRRLAARVLSTWPAIDNYTVNDEDKRR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGGACTCGCGTATGGCTCAGGTGTGGCTTAGAGACGACTTGGAGTTCGTGCGACTTGCGACGGTTAGCAGCTCGAGTGCTTTCAACTTGGCCGGCGATCGACAA
CTACACGGTAAACGACGAAGACAAACGACGATCTACGGCGGAGGCTTCGACAGTTGGGCATGGCAAACACGAAGCGGAGATCGTAACAGCCAGCGTCGATGAGCGAAGAA
ACGGACAGCTTGCGACGATGAAACTCAGCTCCACGAGGTGGATAGACGCGAAGCTTCGGCTAGGGTTGACTACAAGGTCTGATGACGATGGAGGCTCGTCGACGACGGAA
TAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGGACTCGCGTATGGCTCAGGTGTGGCTTAGAGACGACTTGGAGTTCGTGCGACTTGCGACGGTTAGCAGCTCGAGTGCTTTCAACTTGGCCGGCGATCGACAA
CTACACGGTAAACGACGAAGACAAACGACGATCTACGGCGGAGGCTTCGACAGTTGGGCATGGCAAACACGAAGCGGAGATCGTAACAGCCAGCGTCGATGAGCGAAGAA
ACGGACAGCTTGCGACGATGAAACTCAGCTCCACGAGGTGGATAGACGCGAAGCTTCGGCTAGGGTTGACTACAAGGTCTGATGACGATGGAGGCTCGTCGACGACGGAA
TAA
Protein sequenceShow/hide protein sequence
MQRTRVWLRCGLETTWSSCDLRRLAARVLSTWPAIDNYTVNDEDKRRSTAEASTVGHGKHEAEIVTASVDERRNGQLATMKLSSTRWIDAKLRLGLTTRSDDDGGSSTTE