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IVF0025724 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025724
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr06:5696219..5697357
RNA-Seq ExpressionIVF0025724
SyntenyIVF0025724
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035524.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]4.24e-4448.28Show/hide
Query:  MANASNEWRTLVRCQKPLEMHLQRRKRAQLEDFRCSSQENASENAPESVFSSWDKSGPPTFSRPGVKSGPPTISFLCSVLVISLSIFGSRAPRTSTHTPG
        M +ASNEWRTLVRCQKPLEMHLQ+RKRA+LEDF   SQEN SENA   VFSSW K G P    P                   L   G ++     HT  
Subjt:  MANASNEWRTLVRCQKPLEMHLQRRKRAQLEDFRCSSQENASENAPESVFSSWDKSGPPTFSRPGVKSGPPTISFLCSVLVISLSIFGSRAPRTSTHTPG

Query:  MLPDTFSEFSRPGVKSGPPTVSSLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSGGIGREASSLEGELWCDPKRSKRWPKLPTSGERSSGVKNHWKCTC
                                                +TST TP MLPDTFS GIG++ASSLEGE  CDPK+SK WP LPT  +RSSGVKNHWKCTC
Subjt:  MLPDTFSEFSRPGVKSGPPTVSSLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSGGIGREASSLEGELWCDPKRSKRWPKLPTSGERSSGVKNHWKCTC

Query:  SEE
         EE
Subjt:  SEE

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]2.18e-5449.79Show/hide
Query:  FSRPGVKSGPPTISFLCSVLVISLSIFGSRAPRTSTHTPGMLPDTF---------------------------------------SEFSRPGVKSGPPTV
        F RPG K GPPTIS LCSVLVISL IF +R  RTSTHTPGM+ DTF                                       ++FSRPG KSGPPTV
Subjt:  FSRPGVKSGPPTISFLCSVLVISLSIFGSRAPRTSTHTPGMLPDTF---------------------------------------SEFSRPGVKSGPPTV

Query:  SSLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSGG-------------------------------------------------IGREASSLEGELWCD
        SSLCSVLVISLSIFG+R  RTSTHT GMLPDTFSG                                                  + REASSLE ELWCD
Subjt:  SSLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSGG-------------------------------------------------IGREASSLEGELWCD

Query:  PKRSKRWPKLPTSGERSSGVKNHWKCTCSEETG
         KRSKRWP  PT+GERSSGV+NHWKCTCSE  G
Subjt:  PKRSKRWPKLPTSGERSSGVKNHWKCTCSEETG

TYK15439.1 uncharacterized protein E5676_scaffold477G00010 [Cucumis melo var. makuwa]2.32e-4553.05Show/hide
Query:  DFRCSSQENASENAPESVFSSWDKSGPPTFSRPGVKSGPPTISFLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSEFSRPGVKSGPPTVSSLCSVLVIS
        DFRCSSQEN S+NA +SVFSSW                                                            VKSGPPTVSS+CSVLVI 
Subjt:  DFRCSSQENASENAPESVFSSWDKSGPPTFSRPGVKSGPPTISFLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSEFSRPGVKSGPPTVSSLCSVLVIS

Query:  LSIFGSRAPRTSTHTPGMLPDTFSGGIGREASSLEGELWCDPKRSKRWPKLPTSGERSSGVKNH
        LSIFG+  PRTSTHTPGMLPD FSGGI REA SLEGELWCDPKRS+RWP LPTSG+RSS V+NH
Subjt:  LSIFGSRAPRTSTHTPGMLPDTFSGGIGREASSLEGELWCDPKRSKRWPKLPTSGERSSGVKNH

TYK22521.1 uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]3.13e-7952.76Show/hide
Query:  MANASNEWRTLVRCQKPLEMHLQRRKRAQLEDFRCSSQENASENAPESVFSSWDKSGPPT----------------------------------------
        MANASNEWR LVRCQKPLEMHLQRRKR +LEDFRCSSQEN SENAP+S FSSW K   P                                         
Subjt:  MANASNEWRTLVRCQKPLEMHLQRRKRAQLEDFRCSSQENASENAPESVFSSWDKSGPPT----------------------------------------

Query:  --------------------------------------FSRPGVKSGPPTISFLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSEFSRP-------GVK
                                              FSRPG KS PPT+S LCSVLV SLSIFG+  PRTSTHTPGMLPDTFSE   P       G  
Subjt:  --------------------------------------FSRPGVKSGPPTISFLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSEFSRP-------GVK

Query:  SGPPTVSSLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSGGIGREASSLEGELWCDPKRSKRWPKLPTSGERSSGVKNHWKCTCSEETG
          P     L  +   S+ + GS  PRTSTHT GMLPDTFSGGIGREASSLEGEL CDPK SKRWP LPT GERSSG +NHWKCTCSE  G
Subjt:  SGPPTVSSLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSGGIGREASSLEGELWCDPKRSKRWPKLPTSGERSSGVKNHWKCTCSEETG

TYK23424.1 gag/pol protein [Cucumis melo var. makuwa]2.70e-3557.14Show/hide
Query:  SRAPRTSTHTPGMLPDTFS------------EFSR--------PGV-------------KSGPPTVSSLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFS
        +R PRTSTHTPGMLP+TFS            E S+         GV             K+   TVSSL  +LVISL IFG+  PRTSTHT  MLPD FS
Subjt:  SRAPRTSTHTPGMLPDTFS------------EFSR--------PGV-------------KSGPPTVSSLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFS

Query:  GGIGREASSLEGELWCDPKRSKRWPKLPTSGERSSGVKNHWKCTCSE
         GIGREASSLEGEL CDPK  KRWP L TSGE SSGV+N+WK TCSE
Subjt:  GGIGREASSLEGELWCDPKRSKRWPKLPTSGERSSGVKNHWKCTCSE

TrEMBL top hitse value%identityAlignment
A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein3.3e-4649.79Show/hide
Query:  FSRPGVKSGPPTISFLCSVLVISLSIFGSRAPRTSTHTPGMLPDTF---------------------------------------SEFSRPGVKSGPPTV
        F RPG K GPPTIS LCSVLVISL IF +R  RTSTHTPGM+ DTF                                       ++FSRPG KSGPPTV
Subjt:  FSRPGVKSGPPTISFLCSVLVISLSIFGSRAPRTSTHTPGMLPDTF---------------------------------------SEFSRPGVKSGPPTV

Query:  SSLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSGG-------------------------------------------------IGREASSLEGELWCD
        SSLCSVLVISLSIFG+R  RTSTHT GMLPDTFSG                                                  + REASSLE ELWCD
Subjt:  SSLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSGG-------------------------------------------------IGREASSLEGELWCD

Query:  PKRSKRWPKLPTSGERSSGVKNHWKCTCSEETG
         KRSKRWP  PT+GERSSGV+NHWKCTCSE  G
Subjt:  PKRSKRWPKLPTSGERSSGVKNHWKCTCSEETG

A0A5D3CZ27 ULP_PROTEASE domain-containing protein1.0e-3453.05Show/hide
Query:  DFRCSSQENASENAPESVFSSWDKSGPPTFSRPGVKSGPPTISFLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSEFSRPGVKSGPPTVSSLCSVLVIS
        DFRCSSQEN S+NA +SVFSSW                                                            VKSGPPTVSS+CSVLVI 
Subjt:  DFRCSSQENASENAPESVFSSWDKSGPPTFSRPGVKSGPPTISFLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSEFSRPGVKSGPPTVSSLCSVLVIS

Query:  LSIFGSRAPRTSTHTPGMLPDTFSGGIGREASSLEGELWCDPKRSKRWPKLPTSGERSSGVKNH
        LSIFG+  PRTSTHTPGMLPD FSGGI REA SLEGELWCDPKRS+RWP LPTSG+RSS V+NH
Subjt:  LSIFGSRAPRTSTHTPGMLPDTFSGGIGREASSLEGELWCDPKRSKRWPKLPTSGERSSGVKNH

A0A5D3DFP2 Uncharacterized protein3.2e-6552.76Show/hide
Query:  MANASNEWRTLVRCQKPLEMHLQRRKRAQLEDFRCSSQENASENAPESVFSSWDKSGPP-----------------------------------------
        MANASNEWR LVRCQKPLEMHLQRRKR +LEDFRCSSQEN SENAP+S FSSW K   P                                         
Subjt:  MANASNEWRTLVRCQKPLEMHLQRRKRAQLEDFRCSSQENASENAPESVFSSWDKSGPP-----------------------------------------

Query:  -------------------------------------TFSRPGVKSGPPTISFLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSEFSRP-------GVK
                                              FSRPG KS PPT+S LCSVLV SLSIFG+  PRTSTHTPGMLPDTFSE   P       G  
Subjt:  -------------------------------------TFSRPGVKSGPPTISFLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSEFSRP-------GVK

Query:  SGPPTVSSLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSGGIGREASSLEGELWCDPKRSKRWPKLPTSGERSSGVKNHWKCTCSEETG
          P     L  +   S+ + GS  PRTSTHT GMLPDTFSGGIGREASSLEGEL CDPK SKRWP LPT GERSSG +NHWKCTCSE  G
Subjt:  SGPPTVSSLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSGGIGREASSLEGELWCDPKRSKRWPKLPTSGERSSGVKNHWKCTCSEETG

A0A5D3DIF8 Gag/pol protein9.6e-3057.14Show/hide
Query:  SRAPRTSTHTPGMLPDTFS------------EFSR--------PGV-------------KSGPPTVSSLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFS
        +R PRTSTHTPGMLP+TFS            E S+         GV             K+   TVSSL  +LVISL IFG+  PRTSTHT  MLPD FS
Subjt:  SRAPRTSTHTPGMLPDTFS------------EFSR--------PGV-------------KSGPPTVSSLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFS

Query:  GGIGREASSLEGELWCDPKRSKRWPKLPTSGERSSGVKNHWKCTCSE
         GIGREASSLEGEL CDPK  KRWP L TSGE SSGV+N+WK TCSE
Subjt:  GGIGREASSLEGELWCDPKRSKRWPKLPTSGERSSGVKNHWKCTCSE

A0A5D3E5W4 NBS-LRR type resistance protein9.0e-3648.28Show/hide
Query:  MANASNEWRTLVRCQKPLEMHLQRRKRAQLEDFRCSSQENASENAPESVFSSWDKSGPPTFSRPGVKSGPPTISFLCSVLVISLSIFGSRAPRTSTHTPG
        M +ASNEWRTLVRCQKPLEMHLQ+RKRA+LEDF   SQEN SENA   VFSSW K G P    P                   L   G ++     HT  
Subjt:  MANASNEWRTLVRCQKPLEMHLQRRKRAQLEDFRCSSQENASENAPESVFSSWDKSGPPTFSRPGVKSGPPTISFLCSVLVISLSIFGSRAPRTSTHTPG

Query:  MLPDTFSEFSRPGVKSGPPTVSSLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSGGIGREASSLEGELWCDPKRSKRWPKLPTSGERSSGVKNHWKCTC
                                                +TST TP MLPDTFS GIG++ASSLEGE  CDPK+SK WP LPT  +RSSGVKNHWKCTC
Subjt:  MLPDTFSEFSRPGVKSGPPTVSSLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSGGIGREASSLEGELWCDPKRSKRWPKLPTSGERSSGVKNHWKCTC

Query:  SEE
         EE
Subjt:  SEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAATGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCACTTGCAGCGAAGGAAACGGGCTCAGCTCGAGGACTTTCGGTGCTCGTC
CCAAGAAAACGCGAGCGAGAATGCCCCGGAATCAGTTTTCTCATCCTGGGACAAAAGCGGTCCCCCGACGTTTTCTCGTCCTGGGGTAAAAAGCGGTCCCCCGACGATTT
CTTTCCTTTGCTCCGTATTGGTCATAAGTCTTTCGATCTTCGGGTCTCGTGCTCCGAGGACTTCAACCCACACTCCTGGCATGCTCCCTGACACGTTTTCGGAGTTTTCT
CGTCCTGGGGTAAAAAGCGGTCCCCCGACGGTTTCTTCCCTTTGCTCCGTATTGGTCATAAGTCTTTCGATCTTCGGGTCTCGTGCTCCGAGGACTTCAACCCACACTCC
TGGCATGCTCCCTGACACGTTTTCGGGAGGTATAGGTCGGGAAGCGAGCTCGTTGGAGGGAGAACTGTGGTGCGACCCAAAACGGTCCAAAAGATGGCCGAAGCTTCCAA
CGAGTGGCGAACGCTCGTCCGGTGTCAAAAACCACTGGAAATGCACTTGCAGCGAAGAAACGGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAATGCTTCCAACGAGTGGCGAACGCTCGTCCGGTGTCAGAAACCACTGGAAATGCACTTGCAGCGAAGGAAACGGGCTCAGCTCGAGGACTTTCGGTGCTCGTC
CCAAGAAAACGCGAGCGAGAATGCCCCGGAATCAGTTTTCTCATCCTGGGACAAAAGCGGTCCCCCGACGTTTTCTCGTCCTGGGGTAAAAAGCGGTCCCCCGACGATTT
CTTTCCTTTGCTCCGTATTGGTCATAAGTCTTTCGATCTTCGGGTCTCGTGCTCCGAGGACTTCAACCCACACTCCTGGCATGCTCCCTGACACGTTTTCGGAGTTTTCT
CGTCCTGGGGTAAAAAGCGGTCCCCCGACGGTTTCTTCCCTTTGCTCCGTATTGGTCATAAGTCTTTCGATCTTCGGGTCTCGTGCTCCGAGGACTTCAACCCACACTCC
TGGCATGCTCCCTGACACGTTTTCGGGAGGTATAGGTCGGGAAGCGAGCTCGTTGGAGGGAGAACTGTGGTGCGACCCAAAACGGTCCAAAAGATGGCCGAAGCTTCCAA
CGAGTGGCGAACGCTCGTCCGGTGTCAAAAACCACTGGAAATGCACTTGCAGCGAAGAAACGGGCTGA
Protein sequenceShow/hide protein sequence
MANASNEWRTLVRCQKPLEMHLQRRKRAQLEDFRCSSQENASENAPESVFSSWDKSGPPTFSRPGVKSGPPTISFLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSEFS
RPGVKSGPPTVSSLCSVLVISLSIFGSRAPRTSTHTPGMLPDTFSGGIGREASSLEGELWCDPKRSKRWPKLPTSGERSSGVKNHWKCTCSEETG