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IVF0025729 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025729
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCytochrome c oxidase
Genome locationchr04:468945..471574
RNA-Seq ExpressionIVF0025729
SyntenyIVF0025729
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0045277 - respiratory chain complex IV (cellular component)
InterPro domainsIPR003213 - Cytochrome c oxidase, subunit VIb
IPR036549 - Cytochrome c oxidase, subunit VIb superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8027260.1 hypothetical protein BT93_E0235 [Corymbia citriodora subsp. variegata]1.62e-5475Show/hide
Query:  MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYR
        MSASQ+DPHDKMRSRDV+KVA+GEQAPRPAHE GTVS+PPPP     +    +ETAP+D+RFPFTNQTRHCYARYLE+ RC+Q+KGE+A ECKKFA YYR
Subjt:  MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYR

Query:  SLCPGEWV
        SLCP EW+
Subjt:  SLCPGEWV

XP_008465918.1 PREDICTED: putative cytochrome c oxidase subunit 6b-like [Cucumis melo]1.31e-7082.44Show/hide
Query:  MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSV-----------------------VMDEGVETAPSDLRFPFTNQTRHCYARYLE
        MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSV                       VMDEGVETAPSDLRFPFTNQTRHCYARYLE
Subjt:  MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSV-----------------------VMDEGVETAPSDLRFPFTNQTRHCYARYLE

Query:  YHRCVQKKGEHAPECKKFANYYRSLCPGEWV
        YHRCVQKKGEHAPECKKFANYYRSLCPGEWV
Subjt:  YHRCVQKKGEHAPECKKFANYYRSLCPGEWV

XP_031737980.1 putative cytochrome c oxidase subunit 6b-like isoform X1 [Cucumis sativus]1.74e-6777.61Show/hide
Query:  MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSV-------------------------VMDEGVETAPSDLRFPFTNQTRHCYARY
        MSASQIDPHDKMRSRD+SKVARGEQAPRPAHEYGTVSKPPPPSS+SV                         VMDEGV TAPSD+RFPFTNQTRHCYARY
Subjt:  MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSV-------------------------VMDEGVETAPSDLRFPFTNQTRHCYARY

Query:  LEYHRCVQKKGEHAPECKKFANYYRSLCPGEWVR
        LEYHRCVQKKGEHAPECKKFA YYRSLCPGEWVR
Subjt:  LEYHRCVQKKGEHAPECKKFANYYRSLCPGEWVR

XP_031737981.1 cytochrome c oxidase subunit 6B isoform X2 [Cucumis sativus]6.36e-6777.44Show/hide
Query:  MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSV-------------------------VMDEGVETAPSDLRFPFTNQTRHCYARY
        MSASQIDPHDKMRSRD+SKVARGEQAPRPAHEYGTVSKPPPPSS+SV                         VMDEGV TAPSD+RFPFTNQTRHCYARY
Subjt:  MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSV-------------------------VMDEGVETAPSDLRFPFTNQTRHCYARY

Query:  LEYHRCVQKKGEHAPECKKFANYYRSLCPGEWV
        LEYHRCVQKKGEHAPECKKFA YYRSLCPGEWV
Subjt:  LEYHRCVQKKGEHAPECKKFANYYRSLCPGEWV

XP_038886888.1 putative cytochrome c oxidase subunit 6b-like [Benincasa hispida]2.25e-6473.85Show/hide
Query:  MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVVM----------------------DEGVETAPSDLRFPFTNQTRHCYARYLEY
        MSA+Q+DPHDKMRSRD+SKV RGEQAPRPAHEYGTVSKPPPPSS+SV                        DEG+ETAP+DLRFPFTNQTRHCYARYLEY
Subjt:  MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVVM----------------------DEGVETAPSDLRFPFTNQTRHCYARYLEY

Query:  HRCVQKKGEHAPECKKFANYYRSLCPGEWV
        HRCVQK+GEHAPECKKFA YYRSLCPGEW+
Subjt:  HRCVQKKGEHAPECKKFANYYRSLCPGEWV

TrEMBL top hitse value%identityAlignment
A0A0A0LEH8 Uncharacterized protein4.0e-5077.44Show/hide
Query:  MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTS-------------------------VVMDEGVETAPSDLRFPFTNQTRHCYARY
        MSASQIDPHDKMRSRD+SKVARGEQAPRPAHEYGTVSKPPPPSS+S                         VVMDEGV TAPSD+RFPFTNQTRHCYARY
Subjt:  MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTS-------------------------VVMDEGVETAPSDLRFPFTNQTRHCYARY

Query:  LEYHRCVQKKGEHAPECKKFANYYRSLCPGEWV
        LEYHRCVQKKGEHAPECKKFA YYRSLCPGEWV
Subjt:  LEYHRCVQKKGEHAPECKKFANYYRSLCPGEWV

A0A1S3CQ05 putative cytochrome c oxidase subunit 6b-like6.5e-5382.44Show/hide
Query:  MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTS-----------------------VVMDEGVETAPSDLRFPFTNQTRHCYARYLE
        MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTS                       VVMDEGVETAPSDLRFPFTNQTRHCYARYLE
Subjt:  MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTS-----------------------VVMDEGVETAPSDLRFPFTNQTRHCYARYLE

Query:  YHRCVQKKGEHAPECKKFANYYRSLCPGEWV
        YHRCVQKKGEHAPECKKFANYYRSLCPGEWV
Subjt:  YHRCVQKKGEHAPECKKFANYYRSLCPGEWV

A0A5D3E4S8 Putative cytochrome c oxidase subunit 6b-like6.5e-5382.44Show/hide
Query:  MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTS-----------------------VVMDEGVETAPSDLRFPFTNQTRHCYARYLE
        MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTS                       VVMDEGVETAPSDLRFPFTNQTRHCYARYLE
Subjt:  MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTS-----------------------VVMDEGVETAPSDLRFPFTNQTRHCYARYLE

Query:  YHRCVQKKGEHAPECKKFANYYRSLCPGEWV
        YHRCVQKKGEHAPECKKFANYYRSLCPGEWV
Subjt:  YHRCVQKKGEHAPECKKFANYYRSLCPGEWV

A0A6J1F3D0 cytochrome c oxidase subunit 6b-3-like2.2e-3766.67Show/hide
Query:  RSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTS------------------------VVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEH
        R RD+SKVARGEQAPRP HEYGTVSKPPPPSS+S                        VV++EGVETAP+D+RFPFTNQTRHCY RYLEYH  +QKKGEH
Subjt:  RSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTS------------------------VVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEH

Query:  APECKKFANYYRSLCPGEWV
        APEC KFA YYRSLCP EW+
Subjt:  APECKKFANYYRSLCPGEWV

A0A6J1IE20 cytochrome c oxidase subunit 6b-3-like5.9e-3865.29Show/hide
Query:  RSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTS-------------------------VVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGE
        R RD+SKVARGEQAPRP HEYGTVSKPPPPSS+S                         VV++EGVETAP+D+RFPFTNQTRHCY RYLEYH C+QKKGE
Subjt:  RSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTS-------------------------VVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGE

Query:  HAPECKKFANYYRSLCPGEWV
        H PEC KFA YYRSLCP +W+
Subjt:  HAPECKKFANYYRSLCPGEWV

SwissProt top hitse value%identityAlignment
O94581 Cytochrome c oxidase subunit 12, mitochondrial1.6e-1153.7Show/hide
Query:  TAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGEWV
        T   D RFP TNQT+HC+  Y++Y RC++ KGE    CK+F + Y+SLCP EWV
Subjt:  TAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGEWV

Q945L0 Cytochrome c oxidase subunit 6b-21.0e-1864.29Show/hide
Query:  VETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGEWV
        ++TAP+D RFP TNQTRHC+ RY+E+HRC   KGE + +C++FA YYR+LCPGEWV
Subjt:  VETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGEWV

Q9LPJ2 Putative cytochrome c oxidase subunit 6b-like1.3e-2952.42Show/hide
Query:  MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVVM--DEGVET-APSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAN
        MS++Q+DPHDKMRSRD+SKVARG+QAPRPAH  GTVS PP   +T      D G ET A  + RFP TN+TRHC+ R+++YH+C++K G  A +C    +
Subjt:  MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVVM--DEGVET-APSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAN

Query:  YYRSLCPGEWVRGKFSAYGRNRHT
        Y RS+CP E V   +   GRN+ +
Subjt:  YYRSLCPGEWVRGKFSAYGRNRHT

Q9S7L9 Cytochrome c oxidase subunit 6b-11.4e-2073.21Show/hide
Query:  VETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGEWV
        +ETAP+D RFP TNQTRHC+ RY+EYHRCV  KG+ APEC KFA +YRSLCP EWV
Subjt:  VETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGEWV

Q9SUD3 Cytochrome c oxidase subunit 6b-32.7e-1967.86Show/hide
Query:  VETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGEWV
        ++TAP+D RFP TNQTRHC+ RY+E+HRC   KGE A EC++FA YYR+LCPGEWV
Subjt:  VETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGEWV

Arabidopsis top hitse value%identityAlignment
AT1G22450.1 cytochrome C oxidase 6B1.0e-2173.21Show/hide
Query:  VETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGEWV
        +ETAP+D RFP TNQTRHC+ RY+EYHRCV  KG+ APEC KFA +YRSLCP EWV
Subjt:  VETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGEWV

AT1G32710.1 Cytochrome c oxidase, subunit Vib family protein9.0e-3152.42Show/hide
Query:  MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVVM--DEGVET-APSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAN
        MS++Q+DPHDKMRSRD+SKVARG+QAPRPAH  GTVS PP   +T      D G ET A  + RFP TN+TRHC+ R+++YH+C++K G  A +C    +
Subjt:  MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVVM--DEGVET-APSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFAN

Query:  YYRSLCPGEWVRGKFSAYGRNRHT
        Y RS+CP E V   +   GRN+ +
Subjt:  YYRSLCPGEWVRGKFSAYGRNRHT

AT4G28060.1 Cytochrome c oxidase, subunit Vib family protein1.9e-2067.86Show/hide
Query:  VETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGEWV
        ++TAP+D RFP TNQTRHC+ RY+E+HRC   KGE A EC++FA YYR+LCPGEWV
Subjt:  VETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGEWV

AT5G57815.1 Cytochrome c oxidase, subunit Vib family protein7.2e-2064.29Show/hide
Query:  VETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGEWV
        ++TAP+D RFP TNQTRHC+ RY+E+HRC   KGE + +C++FA YYR+LCPGEWV
Subjt:  VETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGEWV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCGTCCCAGATAGATCCTCACGACAAGATGAGATCTAGAGACGTAAGCAAGGTGGCACGTGGCGAGCAAGCCCCAAGGCCAGCTCATGAATACGGCACCGTTTC
AAAGCCTCCGCCGCCTTCTTCCACCTCCGTGGTAATGGATGAGGGAGTAGAAACAGCGCCAAGCGATCTTCGTTTTCCTTTCACTAATCAAACACGACATTGCTATGCAC
GCTATTTGGAATATCATAGGTGCGTACAGAAGAAGGGGGAACACGCACCTGAATGCAAGAAGTTCGCCAACTATTATCGATCTCTATGCCCTGGTGAATGGGTAAGGGGG
AAATTTTCAGCCTATGGTAGAAATCGACATACTATATGTATGTATGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCGTCCCAGATAGATCCTCACGACAAGATGAGATCTAGAGACGTAAGCAAGGTGGCACGTGGCGAGCAAGCCCCAAGGCCAGCTCATGAATACGGCACCGTTTC
AAAGCCTCCGCCGCCTTCTTCCACCTCCGTGGTAATGGATGAGGGAGTAGAAACAGCGCCAAGCGATCTTCGTTTTCCTTTCACTAATCAAACACGACATTGCTATGCAC
GCTATTTGGAATATCATAGGTGCGTACAGAAGAAGGGGGAACACGCACCTGAATGCAAGAAGTTCGCCAACTATTATCGATCTCTATGCCCTGGTGAATGGGTAAGGGGG
AAATTTTCAGCCTATGGTAGAAATCGACATACTATATGTATGTATGTATAA
Protein sequenceShow/hide protein sequence
MSASQIDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSTSVVMDEGVETAPSDLRFPFTNQTRHCYARYLEYHRCVQKKGEHAPECKKFANYYRSLCPGEWVRG
KFSAYGRNRHTICMYV