| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0034017.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 5.56e-161 | 100 | Show/hide |
Query: MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLT
MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLT
Subjt: MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLT
Query: YLGVPLGGNPKSKLFLRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKE
YLGVPLGGNPKSKLFLRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKE
Subjt: YLGVPLGGNPKSKLFLRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKE
Query: EDGLGISRLQITNQALLSKWLWRYYSEPNSL
EDGLGISRLQITNQALLSKWLWRYYSEPNSL
Subjt: EDGLGISRLQITNQALLSKWLWRYYSEPNSL
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| KAA0050814.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 2.68e-156 | 95.67 | Show/hide |
Query: MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLT
MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYL NLRMAISLFEKASGLKINL+KSVMVPVNV WPRALECASSW+ISCHTLPLT
Subjt: MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLT
Query: YLGVPLGGNPKSKLFLRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKE
YLGVPLGGNPKSKLF RNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSH+INW+IVTKPKE
Subjt: YLGVPLGGNPKSKLFLRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKE
Query: EDGLGISRLQITNQALLSKWLWRYYSEPNSL
E LGIS+LQITNQALLSKWLWRYYSEPNSL
Subjt: EDGLGISRLQITNQALLSKWLWRYYSEPNSL
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| TYK05690.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 3.19e-150 | 97.84 | Show/hide |
Query: MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLT
MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMV VNVSWPRALECASSWDISCHTLPLT
Subjt: MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLT
Query: YLGVPLGGNPKSKLFLRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKE
YLGVPLGGNPKSKLF RNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQA SSTYKNIEKLWRNFLWKGSCGSKGSH+INWSIVTKPKE
Subjt: YLGVPLGGNPKSKLFLRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKE
Query: EDGLGISRLQITNQALLSKWLWRYYSEPNSL
E GLGISRLQITNQALLSKWLWRYYSEPNSL
Subjt: EDGLGISRLQITNQALLSKWLWRYYSEPNSL
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| TYK05808.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 5.71e-137 | 90.91 | Show/hide |
Query: MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLT
MDYLSRLLSHLES+GAIKGVCLANDCNISHILFADDILLFVEDND +LNNLRMA+SLFEKASGLKINL+KS MVPVNVSW RALECASSW ISCHTLPLT
Subjt: MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLT
Query: YLGVPLGGNPKSKLFLRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKE
YLGVPLGGNPKS +F RNIEDRIQKKL+NWKYAHISKGGRLTLIKSTLSSL IYQLSVFQAP STYKNIEKLWRNFLWKGS G KGSH+INWSIVTK KE
Subjt: YLGVPLGGNPKSKLFLRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKE
Query: EDGLGISRLQITNQALLSKWLWRYYSEPNSL
E GLGISRLQ+ NQALLSKWLWRYYSEPNSL
Subjt: EDGLGISRLQITNQALLSKWLWRYYSEPNSL
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| TYK15315.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | 4.55e-134 | 82.25 | Show/hide |
Query: MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLT
MDYLSRLLSHLE++GAIKGV L N+CNISHILFADDILLF+EDND +LNNLRMA+ LFEKASGLKINL+KS +VPVNVS RA ECAS WDISCH+LPL+
Subjt: MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLT
Query: YLGVPLGGNPKSKLFLRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKE
YLGVPLGGNPKS LF RN+ED+IQKKL+NWKY ISKGGRLTLIKSTLSSLPIYQLSVFQAPSS KNIEK WRNFLWKGS GSKGSH+INW+ V+K KE
Subjt: YLGVPLGGNPKSKLFLRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKE
Query: EDGLGISRLQITNQALLSKWLWRYYSEPNSL
E GLGISRLQ+TN+ LLSKWLWRY+SEPN+L
Subjt: EDGLGISRLQITNQALLSKWLWRYYSEPNSL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5D3BT10 LINE-1 retrotransposable element ORF2 protein | 1.4e-130 | 100 | Show/hide |
Query: MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLT
MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLT
Subjt: MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLT
Query: YLGVPLGGNPKSKLFLRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKE
YLGVPLGGNPKSKLFLRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKE
Subjt: YLGVPLGGNPKSKLFLRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKE
Query: EDGLGISRLQITNQALLSKWLWRYYSEPNSL
EDGLGISRLQITNQALLSKWLWRYYSEPNSL
Subjt: EDGLGISRLQITNQALLSKWLWRYYSEPNSL
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| A0A5D3C2W8 LINE-1 retrotransposable element ORF2 protein | 7.3e-127 | 97.84 | Show/hide |
Query: MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLT
MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMV VNVSWPRALECASSWDISCHTLPLT
Subjt: MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLT
Query: YLGVPLGGNPKSKLFLRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKE
YLGVPLGGNPKSKLF RNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQA SSTYKNIEKLWRNFLWKGSCGSKGSH+INWSIVTKPKE
Subjt: YLGVPLGGNPKSKLFLRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKE
Query: EDGLGISRLQITNQALLSKWLWRYYSEPNSL
E GLGISRLQITNQALLSKWLWRYYSEPNSL
Subjt: EDGLGISRLQITNQALLSKWLWRYYSEPNSL
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| A0A5D3C3M3 LINE-1 retrotransposable element ORF2 protein | 1.8e-117 | 90.91 | Show/hide |
Query: MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLT
MDYLSRLLSHLES+GAIKGVCLANDCNISHILFADDILLFVEDND +LNNLRMA+SLFEKASGLKINL+KS MVPVNVSW RALECASSW ISCHTLPLT
Subjt: MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLT
Query: YLGVPLGGNPKSKLFLRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKE
YLGVPLGGNPKS +F RNIEDRIQKKL+NWKYAHISKGGRLTLIKSTLSSL IYQLSVFQAP STYKNIEKLWRNFLWKGS G KGSH+INWSIVTK KE
Subjt: YLGVPLGGNPKSKLFLRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKE
Query: EDGLGISRLQITNQALLSKWLWRYYSEPNSL
E GLGISRLQ+ NQALLSKWLWRYYSEPNSL
Subjt: EDGLGISRLQITNQALLSKWLWRYYSEPNSL
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| A0A5D3C9J6 LINE-1 retrotransposable element ORF2 protein | 6.9e-125 | 95.67 | Show/hide |
Query: MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLT
MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYL NLRMAISLFEKASGLKINL+KSVMVPVNV WPRALECASSW+ISCHTLPLT
Subjt: MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLT
Query: YLGVPLGGNPKSKLFLRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKE
YLGVPLGGNPKSKLF RNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSH+INW+IVTKPKE
Subjt: YLGVPLGGNPKSKLFLRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKE
Query: EDGLGISRLQITNQALLSKWLWRYYSEPNSL
E LGIS+LQITNQALLSKWLWRYYSEPNSL
Subjt: EDGLGISRLQITNQALLSKWLWRYYSEPNSL
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| A0A5D3CUY8 LINE-1 retrotransposable element ORF2 protein | 5.5e-106 | 82.25 | Show/hide |
Query: MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLT
MDYLSRLLSHLE++GAIKGV L N+CNISHILFADDILLF+EDND +LNNLRMA+ LFEKASGLKINL+KS +VPVNVS RA ECAS WDISCH+LPL+
Subjt: MDYLSRLLSHLESTGAIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLT
Query: YLGVPLGGNPKSKLFLRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKE
YLGVPLGGNPKS LF RN+ED+IQKKL+NWKY ISKGGRLTLIKSTLSSLPIYQLSVFQAPSS KNIEK WRNFLWKGS GSKGSH+INW+ V+K KE
Subjt: YLGVPLGGNPKSKLFLRNIEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKE
Query: EDGLGISRLQITNQALLSKWLWRYYSEPNSL
E GLGISRLQ+TN+ LLSKWLWRY+SEPN+L
Subjt: EDGLGISRLQITNQALLSKWLWRYYSEPNSL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O00370 LINE-1 retrotransposable element ORF2 protein | 2.9e-11 | 25.23 | Show/hide |
Query: IKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLTYLGVPLGGNPKSKLFL
IKG+ L + + LFADD+++++E+ + NL IS F K SG KIN+ KS N + + + + + YLG+ L + K LF
Subjt: IKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLTYLGVPLGGNPKSKLFL
Query: RNIE---DRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSV--FQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKEEDGLGISRLQI
N + I++ + WK S GR+ ++K + IY+ + + P + + +EK F+W K + + SI+++ + G+ + ++
Subjt: RNIE---DRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSV--FQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKEEDGLGISRLQI
Query: TNQALLSKWLWRYY
+A ++K W +Y
Subjt: TNQALLSKWLWRYY
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| P08548 LINE-1 reverse transcriptase homolog | 1.6e-09 | 24.65 | Show/hide |
Query: AIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLTYLGVPLGGNPKSKLF
AIKG+ + ++ I LFADD+++++E+ L I + SG KIN KSV + S + + YLGV L + K L+
Subjt: AIKGVCLANDCNISHILFADDILLFVEDNDLYLNNLRMAISLFEKASGLKINLTKSVMVPVNVSWPRALECASSWDISCHTLPLTYLGVPLGGNPKSKLF
Query: LRNIE---DRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSV--FQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKEEDGLGISRLQ
N E I + ++ WK S GR+ ++K ++ IY + +AP S +K++EK+ +F+W ++ I ++++ + G+ + L+
Subjt: LRNIE---DRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSV--FQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKEEDGLGISRLQ
Query: ITNQALLSKWLWRYY
+ ++++ K W ++
Subjt: ITNQALLSKWLWRYY
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| P0C2F6 Putative ribonuclease H protein At1g65750 | 9.8e-20 | 39.82 | Show/hide |
Query: IEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKEEDGLGISRLQITNQALLS
I +R+ ++S W+ +S GRLTL K+ LSS+P++ +S P S +++L R FLW + K H++ WS V PK+E GLG+ + N+AL+S
Subjt: IEDRIQKKLSNWKYAHISKGGRLTLIKSTLSSLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKEEDGLGISRLQITNQALLS
Query: KWLWRYYSEPNSL
K WR E NSL
Subjt: KWLWRYYSEPNSL
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| P93295 Uncharacterized mitochondrial protein AtMg00310 | 2.6e-04 | 31.33 | Show/hide |
Query: SLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKEED-GLGISRLQITNQALLSKWLWRYYSEPNSL
+LP+Y +S F+ K + F W + + W + K KE+D GLG L NQALL+K +R +P++L
Subjt: SLPIYQLSVFQAPSSTYKNIEKLWRNFLWKGSCGSKGSHVINWSIVTKPKEED-GLGISRLQITNQALLSKWLWRYYSEPNSL
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