; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0025820 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025820
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionmRNA decay activator protein ZFP36L2-like isoform X2
Genome locationchr01:9795540..9797456
RNA-Seq ExpressionIVF0025820
SyntenyIVF0025820
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000571 - Zinc finger, CCCH-type
IPR036855 - Zinc finger, CCCH-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK07952.1 tristetraprolin-like isoform X2 [Cucumis melo var. makuwa]1.91e-184100Show/hide
Query:  MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGGGKNQYRSDICRYWEDSGS
        MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGGGKNQYRSDICRYWEDSGS
Subjt:  MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGGGKNQYRSDICRYWEDSGS

Query:  CRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETYGSKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPTSSSLKRQTNTNPTLISTISIIDWS
        CRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETYGSKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPTSSSLKRQTNTNPTLISTISIIDWS
Subjt:  CRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETYGSKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPTSSSLKRQTNTNPTLISTISIIDWS

Query:  PEDDDGIKDWSPEDDGIKIVVPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQEE
        PEDDDGIKDWSPEDDGIKIVVPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQEE
Subjt:  PEDDDGIKDWSPEDDGIKIVVPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQEE

XP_004148935.1 uncharacterized protein LOC101215865 [Cucumis sativus]1.24e-16190.6Show/hide
Query:  MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGGGKNQYRSDICRYWEDSGS
        MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPP++SPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGGGKNQYRSDICRYWEDSG+
Subjt:  MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGGGKNQYRSDICRYWEDSGS

Query:  CRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETYGSKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPTSSSLKRQTNTNPTLISTISIIDWS
        CRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETYGSKFRNNHSL+GI+ATTTTQSNSNLVDTITKTELSKR GLTPTSS+LK  TN NPTLISTISII+WS
Subjt:  CRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETYGSKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPTSSSLKRQTNTNPTLISTISIIDWS

Query:  PEDDDGIKDWSPEDDGIKIVVPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQEE
        PEDD           GIKI VPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVF Q+CSEELQEE
Subjt:  PEDDDGIKDWSPEDDGIKIVVPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQEE

XP_022154583.1 uncharacterized protein LOC111021811 [Momordica charantia]2.86e-10465.93Show/hide
Query:  MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGG---GKNQYRSDICRYWED
        MNHYASSTS S+SFGSRG G SLSPLSAIENLETP  +SPQIYGTP+KVDEEVIVMDGILISS+ G AKT+RS  +S +GGG   GKN YR+DICR WED
Subjt:  MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGG---GKNQYRSDICRYWED

Query:  SGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSE----TYG-SKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPTSSSLKRQTNTNPTLIS
        SGSCR+G+KCQFAHGKE+LRP RLPV+ K K S+    TYG SKF ++H+L+       T S+S ++DTI  +E+S+ EG    S    R  NT P+LIS
Subjt:  SGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSE----TYG-SKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPTSSSLKRQTNTNPTLIS

Query:  TISIIDWSPEDDDGIKDWSPEDDGIKIVVPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQE
        TISI+DWSPEDD           GIKIV+P ++STKREDVNQ+IHEVLYGST ERTKKRLPVF+QLCSE+LQ+
Subjt:  TISIIDWSPEDDDGIKDWSPEDDGIKIVVPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQE

XP_023536031.1 uncharacterized protein LOC111797287 isoform X1 [Cucurbita pepo subsp. pepo]1.94e-9664.58Show/hide
Query:  MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGGG---KNQYRSDICRYWED
        +NH+ASSTSGS+SFGSR  G SLSPLSAIENLET PV+SPQIYGTP+KV EEVIVMD ILISS+HG AKT++S LDSGSGGG    KNQYR+DICR WED
Subjt:  MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGGG---KNQYRSDICRYWED

Query:  SGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSE---TYGSKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPTSSSLKRQTNTNPTLISTI
        SGSCRFG+KCQFAHGKE+LRP  LP++TK KF E   T+G K RNNHSL+GI+ATT  QSNS  +D   KTELS+R        S+    N N       
Subjt:  SGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSE---TYGSKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPTSSSLKRQTNTNPTLISTI

Query:  SIIDWSPEDDDGIKDWSPEDDGIKIVVPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQE
                      DWSPEDD I++VVP T+ST R DV+QHIHEVLYGSTTERTKKRL VF QLCS + +E
Subjt:  SIIDWSPEDDDGIKDWSPEDDGIKIVVPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQE

XP_038897010.1 uncharacterized protein LOC120085195 [Benincasa hispida]9.12e-13478.15Show/hide
Query:  MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGG---GKNQYRSDICRYWED
        MNHYASSTSG NSFGSRGAG  LSPLSAIENLETPPV+SPQIYGTP+KVDEEVIVMDGILISSI G AKT+RSPLDSGSGGG    KNQYR+DICRYWED
Subjt:  MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGG---GKNQYRSDICRYWED

Query:  SGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETYGSKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPTSSSLK-RQTNTNPTLISTISI
        SGSCRFG+KCQFAHGKEDLRP R+PVRTK KFSETYG KFRN+HSL+GI+ATT    +SNL+DT  KTELS+RE LT T+SS   R  NT P+LI TISI
Subjt:  SGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETYGSKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPTSSSLK-RQTNTNPTLISTISI

Query:  IDWSPEDDDGIKDWSPEDDGIKIVVPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQEE
        IDWSPEDD           GIKIVVP TE+TKREDVNQ+IH VLYGSTTERTKKRLPVF+QLCSE+LQ+E
Subjt:  IDWSPEDDDGIKDWSPEDDGIKIVVPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQEE

TrEMBL top hitse value%identityAlignment
A0A0A0K529 C3H1-type domain-containing protein2.9e-12790.6Show/hide
Query:  MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGGGKNQYRSDICRYWEDSGS
        MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPP++SPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGGGKNQYRSDICRYWEDSG+
Subjt:  MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGGGKNQYRSDICRYWEDSGS

Query:  CRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETYGSKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPTSSSLKRQTNTNPTLISTISIIDWS
        CRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETYGSKFRNNHSL+GI+ATTTTQSNSNLVDTITKTELSKR GLTPTSS+LK  TN NPTLISTISII   
Subjt:  CRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETYGSKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPTSSSLKRQTNTNPTLISTISIIDWS

Query:  PEDDDGIKDWSPEDDGIKIVVPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQEE
                +WSPEDDGIKI VPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVF Q+CSEELQEE
Subjt:  PEDDDGIKDWSPEDDGIKIVVPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQEE

A0A5D3C9H3 Tristetraprolin-like isoform X26.9e-145100Show/hide
Query:  MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGGGKNQYRSDICRYWEDSGS
        MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGGGKNQYRSDICRYWEDSGS
Subjt:  MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGGGKNQYRSDICRYWEDSGS

Query:  CRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETYGSKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPTSSSLKRQTNTNPTLISTISIIDWS
        CRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETYGSKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPTSSSLKRQTNTNPTLISTISIIDWS
Subjt:  CRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETYGSKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPTSSSLKRQTNTNPTLISTISIIDWS

Query:  PEDDDGIKDWSPEDDGIKIVVPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQEE
        PEDDDGIKDWSPEDDGIKIVVPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQEE
Subjt:  PEDDDGIKDWSPEDDGIKIVVPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQEE

A0A6J1DKP7 uncharacterized protein LOC1110218116.8e-8465.69Show/hide
Query:  MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGG---GKNQYRSDICRYWED
        MNHYASSTS S+SFGSRG G SLSPLSAIENLETP  +SPQIYGTP+KVDEEVIVMDGILISS+ G AKT+RS  +S +GGG   GKN YR+DICR WED
Subjt:  MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGG---GKNQYRSDICRYWED

Query:  SGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSE----TYG-SKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPTSSSLKRQTNTNPTLIS
        SGSCR+G+KCQFAHGKE+LRP RLPV+ K K S+    TYG SKF ++H+L+       T S+S ++DTI  +E+S+ EG    S    R  NT P+LIS
Subjt:  SGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSE----TYG-SKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPTSSSLKRQTNTNPTLIS

Query:  TISIIDWSPEDDDGIKDWSPEDDGIKIVVPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQEE
        TISI+           DWSPEDDGIKIV+P ++STKREDVNQ+IHEVLYGST ERTKKRLPVF+QLCSE+LQ++
Subjt:  TISIIDWSPEDDDGIKDWSPEDDGIKIVVPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQEE

A0A6J1ICU5 uncharacterized protein LOC111472626 isoform X18.0e-7763.1Show/hide
Query:  MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGG---GKNQYRSDICRYWED
        +NH+ASSTSGS+SFGSR  G SLSPLSA+ENLET PV+SPQIYGTP+KV EEVIVMD ILISS+HG AKT++S LDSGSGGG    KNQYR+DICR WED
Subjt:  MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGG---GKNQYRSDICRYWED

Query:  SGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSE---TYGSKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPTSSSLKRQTNTNPTLISTI
        SGSCRFG+KCQFAHGKE+LRP  LPV+TK KF E   T+G K RNNHSL+GI+ATT     SN +    KTEL++R        S+    N N       
Subjt:  SGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSE---TYGSKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPTSSSLKRQTNTNPTLISTI

Query:  SIIDWSPEDDDGIKDWSPEDDGIKIVVPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQE
                      DWSP+DDGI++VVP T+ST R DV+QHI EVLYGSTTER KKRLPVF QLCS  L+E
Subjt:  SIIDWSPEDDDGIKDWSPEDDGIKIVVPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQE

A0A6J1IEX1 uncharacterized protein LOC111472616 isoform X18.0e-7763.1Show/hide
Query:  MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGG---GKNQYRSDICRYWED
        +NH+ASSTSGS+SFGSR  G SLSPLSA+ENLET PV+SPQIYGTP+KV EEVIVMD ILISS+HG AKT++S LDSGSGGG    KNQYR+DICR WED
Subjt:  MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGG---GKNQYRSDICRYWED

Query:  SGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSE---TYGSKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPTSSSLKRQTNTNPTLISTI
        SGSCRFG+KCQFAHGKE+LRP  LPV+TK KF E   T+G K RNNHSL+GI+ATT     SN +    KTEL++R        S+    N N       
Subjt:  SGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSE---TYGSKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPTSSSLKRQTNTNPTLISTI

Query:  SIIDWSPEDDDGIKDWSPEDDGIKIVVPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQE
                      DWSP+DDGI++VVP T+ST R DV+QHI EVLYGSTTER KKRLPVF QLCS  L+E
Subjt:  SIIDWSPEDDDGIKDWSPEDDGIKIVVPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQE

SwissProt top hitse value%identityAlignment
P17431 mRNA decay activator protein ZFP36L12.4e-0639.29Show/hide
Query:  GSGGGGKNQYRSDICRYWEDSGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETY
        GSG    ++Y++++CR +E++G+C++G+KCQFAHG  +LR      + KT+   T+
Subjt:  GSGGGGKNQYRSDICRYWEDSGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETY

P23950 mRNA decay activator protein ZFP36L12.4e-0639.29Show/hide
Query:  GSGGGGKNQYRSDICRYWEDSGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETY
        GSG    ++Y++++CR +E++G+C++G+KCQFAHG  +LR      + KT+   T+
Subjt:  GSGGGGKNQYRSDICRYWEDSGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETY

P47974 mRNA decay activator protein ZFP36L22.4e-0641.38Show/hide
Query:  GGGG----KNQYRSDICRYWEDSGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETY
        GGGG      +Y++++CR +E+SG+C++G KCQFAHG  +LR      + KT+   T+
Subjt:  GGGG----KNQYRSDICRYWEDSGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETY

P47980 Protein TIS117.1e-0624.79Show/hide
Query:  NQYRSDICRYWEDSGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSET--------YGSKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPT
        ++Y++++CR +E++G C++G KCQFAHG  +LR      + KT++  T        YG +    H+     A    Q+  +   + ++++ S  +  +P 
Subjt:  NQYRSDICRYWEDSGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSET--------YGSKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPT

Query:  SSSLKRQTNTNPTLIST
        S+    Q++ + +  S+
Subjt:  SSSLKRQTNTNPTLIST

Q07352 mRNA decay activator protein ZFP36L14.2e-0638.71Show/hide
Query:  PLDSGSGGGGKN--QYRSDICRYWEDSGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETY
        P     GGG  N  +Y++++CR +E++G+C++G+KCQFAHG  +LR      + KT+   T+
Subjt:  PLDSGSGGGGKN--QYRSDICRYWEDSGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSETY

Arabidopsis top hitse value%identityAlignment
AT1G32360.1 Zinc finger (CCCH-type) family protein8.9e-0445.45Show/hide
Query:  SGSGGG----GKNQYRSDICRYWEDSGSCRFGNKCQFAHGKEDL
        SGSG G      + +++ IC  WE +G C FG KC FAHG  +L
Subjt:  SGSGGG----GKNQYRSDICRYWEDSGSCRFGNKCQFAHGKEDL

AT1G66810.1 Zinc finger C-x8-C-x5-C-x3-H type family protein1.6e-0533.85Show/hide
Query:  RSDICRYWEDSGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSE--------TYGSKFRNNHSLS
        ++++C  W+++G+C +G+ CQFAHG ++LRP     R KT+            YG +    HSL+
Subjt:  RSDICRYWEDSGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSE--------TYGSKFRNNHSLS

AT1G68200.1 Zinc finger C-x8-C-x5-C-x3-H type family protein9.5e-0635.38Show/hide
Query:  RSDICRYWEDSGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSE--------TYGSKFRNNHSLS
        ++++C  W+++G+C +G+ CQFAHG ++LRP     R KT+            YG +    HSLS
Subjt:  RSDICRYWEDSGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSE--------TYGSKFRNNHSLS

AT1G68200.2 Zinc finger C-x8-C-x5-C-x3-H type family protein9.5e-0635.38Show/hide
Query:  RSDICRYWEDSGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSE--------TYGSKFRNNHSLS
        ++++C  W+++G+C +G+ CQFAHG ++LRP     R KT+            YG +    HSLS
Subjt:  RSDICRYWEDSGSCRFGNKCQFAHGKEDLRPGRLPVRTKTKFSE--------TYGSKFRNNHSLS

AT3G12130.1 KH domain-containing protein / zinc finger (CCCH type) family protein5.2e-0431.07Show/hide
Query:  LSAIENLETPPVKSPQIYGTPMKVDE-EVIVMDGILISSIHGEAKTVRSPLDSGSGGGG----------KNQYRSDICRYWEDSGSCRFGNKCQFAHGKE
        LS  ++   P +K+  + GT  ++ E   +V D  LI  ++  AK    P   G GGGG           + +++ IC  +   G+C FG++C FAHG+ 
Subjt:  LSAIENLETPPVKSPQIYGTPMKVDE-EVIVMDGILISSIHGEAKTVRSPLDSGSGGGG----------KNQYRSDICRYWEDSGSCRFGNKCQFAHGKE

Query:  DLR
        +LR
Subjt:  DLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCACTATGCTAGCAGCACTTCTGGAAGCAATAGCTTTGGTTCTCGGGGAGCAGGGTTGTCATTATCACCACTTTCGGCGATTGAGAATTTGGAAACACCACCTGT
AAAGTCTCCACAAATTTATGGAACTCCCATGAAGGTCGATGAAGAAGTGATAGTAATGGATGGGATTTTGATCAGTTCAATTCATGGGGAAGCAAAGACAGTGAGGTCTC
CATTAGATTCTGGAAGTGGTGGAGGGGGGAAAAATCAATACAGATCGGACATTTGCCGCTACTGGGAGGATTCTGGTAGCTGCCGCTTTGGCAACAAATGCCAGTTTGCG
CATGGAAAGGAGGACCTTCGGCCAGGTCGTTTACCAGTTAGAACCAAGACTAAGTTCAGCGAAACGTATGGTTCCAAGTTCCGCAACAATCATTCACTATCAGGAATATC
TGCGACAACCACAACGCAATCAAACTCAAACTTGGTAGATACAATCACCAAAACTGAACTAAGCAAAAGAGAAGGTCTTACTCCAACATCCTCGTCATTAAAACGGCAAA
CGAACACTAACCCTACCCTTATTTCGACCATTTCTATCATCGATTGGTCGCCTGAAGATGATGATGGGATCAAAGATTGGTCGCCTGAAGATGATGGCATAAAAATTGTT
GTCCCCGGAACAGAGTCGACAAAAAGAGAAGATGTAAACCAACACATCCATGAGGTTCTTTATGGTTCCACCACTGAGAGGACTAAAAAGAGACTCCCAGTTTTCAGTCA
ACTTTGCTCTGAAGAACTACAAGAAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATCACTATGCTAGCAGCACTTCTGGAAGCAATAGCTTTGGTTCTCGGGGAGCAGGGTTGTCATTATCACCACTTTCGGCGATTGAGAATTTGGAAACACCACCTGT
AAAGTCTCCACAAATTTATGGAACTCCCATGAAGGTCGATGAAGAAGTGATAGTAATGGATGGGATTTTGATCAGTTCAATTCATGGGGAAGCAAAGACAGTGAGGTCTC
CATTAGATTCTGGAAGTGGTGGAGGGGGGAAAAATCAATACAGATCGGACATTTGCCGCTACTGGGAGGATTCTGGTAGCTGCCGCTTTGGCAACAAATGCCAGTTTGCG
CATGGAAAGGAGGACCTTCGGCCAGGTCGTTTACCAGTTAGAACCAAGACTAAGTTCAGCGAAACGTATGGTTCCAAGTTCCGCAACAATCATTCACTATCAGGAATATC
TGCGACAACCACAACGCAATCAAACTCAAACTTGGTAGATACAATCACCAAAACTGAACTAAGCAAAAGAGAAGGTCTTACTCCAACATCCTCGTCATTAAAACGGCAAA
CGAACACTAACCCTACCCTTATTTCGACCATTTCTATCATCGATTGGTCGCCTGAAGATGATGATGGGATCAAAGATTGGTCGCCTGAAGATGATGGCATAAAAATTGTT
GTCCCCGGAACAGAGTCGACAAAAAGAGAAGATGTAAACCAACACATCCATGAGGTTCTTTATGGTTCCACCACTGAGAGGACTAAAAAGAGACTCCCAGTTTTCAGTCA
ACTTTGCTCTGAAGAACTACAAGAAGAATAA
Protein sequenceShow/hide protein sequence
MNHYASSTSGSNSFGSRGAGLSLSPLSAIENLETPPVKSPQIYGTPMKVDEEVIVMDGILISSIHGEAKTVRSPLDSGSGGGGKNQYRSDICRYWEDSGSCRFGNKCQFA
HGKEDLRPGRLPVRTKTKFSETYGSKFRNNHSLSGISATTTTQSNSNLVDTITKTELSKREGLTPTSSSLKRQTNTNPTLISTISIIDWSPEDDDGIKDWSPEDDGIKIV
VPGTESTKREDVNQHIHEVLYGSTTERTKKRLPVFSQLCSEELQEE