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IVF0025824 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025824
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description11 kDa late embryogenesis abundant protein-like
Genome locationchr04:28660670..28661480
RNA-Seq ExpressionIVF0025824
SyntenyIVF0025824
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
InterPro domainsIPR005513 - Late embryogenesis abundant protein, LEA_1 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK25405.1 18 kDa seed maturation protein [Cucumis melo var. makuwa]5.65e-71100Show/hide
Query:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGTGPEPTPT
        MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGTGPEPTPT
Subjt:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGTGPEPTPT

Query:  TRPWGADKARGQLSDVVT
        TRPWGADKARGQLSDVVT
Subjt:  TRPWGADKARGQLSDVVT

XP_022940345.1 11 kDa late embryogenesis abundant protein-like [Cucurbita moschata]1.02e-3476.6Show/hide
Query:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGTG
        MQSG+NAAE+VKESAANVGASA+AGMEKTKATAQEKVDKMRAHDP EK+M  E+K+ER+  A+LDKQQAR EHA ERQA +  G  TGL TGTG
Subjt:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGTG

XP_022971427.1 11 kDa late embryogenesis abundant protein-like [Cucurbita maxima]2.23e-3577.66Show/hide
Query:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGTG
        MQSG+NAAE+VKESAANVGASA+AGMEKTKATAQEKVDKMRAHDP EK+M  E+K+ER+  A+LDKQQAR EHAAERQA +  G  TGL TGTG
Subjt:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGTG

XP_031737964.1 11 kDa late embryogenesis abundant protein-like [Cucumis sativus]4.43e-4691.4Show/hide
Query:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGT
        MQSGRNAAEA+KESAANVGASAKAGMEKTKATAQEKVDKMRAHDP+EK+M RE+KDERIQEA+LDKQQAR EHAAERQ GTGPGTRTGLGTGT
Subjt:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGT

XP_038905932.1 11 kDa late embryogenesis abundant protein-like [Benincasa hispida]1.15e-4286.17Show/hide
Query:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGTG
        MQSGRNAAEA KESAANVGASAKAGMEK KA+AQEKVDKMRAHDP EK+M RE+K+ERIQEA+LDKQQAR EHAA+RQ GTGPGTR GLGTGTG
Subjt:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGTG

TrEMBL top hitse value%identityAlignment
A0A0A0LBV1 Uncharacterized protein2.5e-3491.4Show/hide
Query:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGT
        MQSGRNAAEA+KESAANVGASAKAGMEKTKATAQEKVDKMRAHDP+EK+M RE+KDERIQEA+LDKQQAR EHAAERQ GTGPGTRTGLGTGT
Subjt:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGT

A0A5D3DPJ3 18 kDa seed maturation protein8.2e-54100Show/hide
Query:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGTGPEPTPT
        MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGTGPEPTPT
Subjt:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGTGPEPTPT

Query:  TRPWGADKARGQLSDVVT
        TRPWGADKARGQLSDVVT
Subjt:  TRPWGADKARGQLSDVVT

A0A6J1DVT9 11 kDa late embryogenesis abundant protein-like3.6e-2573.27Show/hide
Query:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGTGPEPTPT
        MQSGRNAAE+ KESAANVGA+A+AGM+KTKATAQEKVDKMRAHDP EK+M   +K+ERI EA+++KQQAR  HAAERQAGT  GT  GL TGTG    PT
Subjt:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGTGPEPTPT

Query:  T
        T
Subjt:  T

A0A6J1FQA5 11 kDa late embryogenesis abundant protein-like9.5e-2676.6Show/hide
Query:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGTG
        MQSG+NAAE+VKESAANVGASA+AGMEKTKATAQEKVDKMRAHDP EK+M  E+K+ER+  A+LDKQQAR EHA ERQA +  G  TGL TGTG
Subjt:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGTG

A0A6J1I1X4 11 kDa late embryogenesis abundant protein-like3.3e-2677.66Show/hide
Query:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGTG
        MQSG+NAAE+VKESAANVGASA+AGMEKTKATAQEKVDKMRAHDP EK+M  E+K+ER+  A+LDKQQAR EHAAERQA +  G  TGL TGTG
Subjt:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGTG

SwissProt top hitse value%identityAlignment
P09441 Late embryogenesis abundant protein D-1131.2e-0952.44Show/hide
Query:  ESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGTG
        +S  +  ASAKAGMEK KA+ QEKVD+M+  DP EKEM RE+K+ER ++A+L KQ+AR  +A     G G     G+G GTG
Subjt:  ESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGTG

P46515 11 kDa late embryogenesis abundant protein4.1e-1859.8Show/hide
Query:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQ-AGTGPGTR-------TGLGTG
        MQSG+NAA + KE+AANV ASAKAGMEKTKA+ QEK +KM AHDP +KEM REKK+ER  EA+ +KQ A+  +AA++Q  G G GT        TG  TG
Subjt:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQ-AGTGPGTR-------TGLGTG

Query:  TG
        TG
Subjt:  TG

Q00747 Protein LE252.7e-0944.55Show/hide
Query:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGTGPEPTPT
        MQ+G++AA A           AKAGMEKTKA  QEK ++M   DP +KEM  EKK++R+  A++ K+ A+ +HAAE+Q     GT T   TG G     T
Subjt:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGTGPEPTPT

Query:  T
        T
Subjt:  T

Q01417 18 kDa seed maturation protein1.3e-1647.9Show/hide
Query:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGT-----GPGTRTGLGTGTGP
        MQ G+ A E++KE+A N+GASAKAGMEKTKAT QEK ++M A DP +KE+  +KK+ ++ +A+LDKQ AR  + A +Q+ T     G G  T  GTGTG 
Subjt:  MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGT-----GPGTRTGLGTGTGP

Query:  EPTPTTRPWGADKARGQLS
            TT  +G      Q S
Subjt:  EPTPTTRPWGADKARGQLS

Q9FG31 Late embryogenesis abundant protein 462.2e-1145.88Show/hide
Query:  EAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGT
        +++KE+A+N+ ASAK+GM+KTKAT +EK +KM+  DP +K+M  + K+++I +A++ K++ R  +AA ++A  G GT  GLGT T
Subjt:  EAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGT

Arabidopsis top hitse value%identityAlignment
AT5G06760.1 Late Embryogenesis Abundant 4-51.6e-1245.88Show/hide
Query:  EAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGT
        +++KE+A+N+ ASAK+GM+KTKAT +EK +KM+  DP +K+M  + K+++I +A++ K++ R  +AA ++A  G GT  GLGT T
Subjt:  EAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATCGGGAAGAAACGCGGCGGAGGCGGTGAAGGAATCGGCCGCCAACGTGGGAGCCTCTGCCAAAGCTGGCATGGAAAAAACCAAAGCCACTGCTCAAGAAAAGGT
GGACAAAATGAGGGCCCACGATCCATACGAGAAAGAAATGGTGAGAGAAAAGAAAGATGAGAGGATTCAGGAGGCTGACCTGGACAAGCAGCAGGCGCGTTTTGAACACG
CAGCAGAGAGGCAGGCCGGTACTGGACCCGGGACCCGTACCGGTTTGGGAACGGGGACAGGACCGGAACCAACACCTACGACCCGACCGTGGGGGGCCGATAAGGCGCGT
GGCCAGTTATCTGATGTGGTCACCGGTTTATATGAATGTGGCTTTGCTTGCTTTGTTTTGCTTTTTATTTTTTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAATCGGGAAGAAACGCGGCGGAGGCGGTGAAGGAATCGGCCGCCAACGTGGGAGCCTCTGCCAAAGCTGGCATGGAAAAAACCAAAGCCACTGCTCAAGAAAAGGT
GGACAAAATGAGGGCCCACGATCCATACGAGAAAGAAATGGTGAGAGAAAAGAAAGATGAGAGGATTCAGGAGGCTGACCTGGACAAGCAGCAGGCGCGTTTTGAACACG
CAGCAGAGAGGCAGGCCGGTACTGGACCCGGGACCCGTACCGGTTTGGGAACGGGGACAGGACCGGAACCAACACCTACGACCCGACCGTGGGGGGCCGATAAGGCGCGT
GGCCAGTTATCTGATGTGGTCACCGGTTTATATGAATGTGGCTTTGCTTGCTTTGTTTTGCTTTTTATTTTTTTTTAG
Protein sequenceShow/hide protein sequence
MQSGRNAAEAVKESAANVGASAKAGMEKTKATAQEKVDKMRAHDPYEKEMVREKKDERIQEADLDKQQARFEHAAERQAGTGPGTRTGLGTGTGPEPTPTTRPWGADKAR
GQLSDVVTGLYECGFACFVLLFIFF