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IVF0025858 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025858
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionElongation factor
Genome locationchr01:27442529..27443760
RNA-Seq ExpressionIVF0025858
SyntenyIVF0025858
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0003746 - translation elongation factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN44804.1 hypothetical protein Csa_015628 [Cucumis sativus]7.59e-4095.45Show/hide
Query:  MGWFKSFLISPFKKLWDRLHSSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNSPLPS
        MGWFKSFLISPFKKLWDRLHS PH+SNRKGIYILYKDVKSCPCEDVQMLWSILVQS SPPNSPLPS
Subjt:  MGWFKSFLISPFKKLWDRLHSSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNSPLPS

PON55247.1 hypothetical protein PanWU01x14_189360 [Parasponia andersonii]6.15e-2475.86Show/hide
Query:  MGWFKSFLISPFKKLWDRLHSSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGS
        MGW +SF +SP KKLWDRLHS  H   R+GIYILYKDVKSCPCEDVQ+LWSILV+SG+
Subjt:  MGWFKSFLISPFKKLWDRLHSSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGS

PON94924.1 elongation factor [Trema orientale]1.24e-2375.86Show/hide
Query:  MGWFKSFLISPFKKLWDRLHSSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGS
        MGW +S L+SP KKLWDRLHS  H   R+GIYILYKDVKSCPCEDVQ+LWSILV+SG+
Subjt:  MGWFKSFLISPFKKLWDRLHSSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGS

RXI05532.1 hypothetical protein DVH24_017574 [Malus domestica]1.63e-2374.63Show/hide
Query:  MGWFKSFLISPFKKLWDRLHSSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNSP-LPS
        MGW +S L+SP KKLWDRLHSS HR  RKGIYILYKDV+SCPCEDV +LWSILV S S P  P LPS
Subjt:  MGWFKSFLISPFKKLWDRLHSSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNSP-LPS

XP_025982996.1 uncharacterized protein LOC113000477 [Glycine max]7.66e-2472.73Show/hide
Query:  MGWFKSFLISPFKKLWDRLHSSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNSPLPS
        MGWF+S L+ P KKLWDRLHSS     R+GIYILYKDVKSCPCEDV +LWSILV+SG+ P S LPS
Subjt:  MGWFKSFLISPFKKLWDRLHSSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNSPLPS

TrEMBL top hitse value%identityAlignment
A0A0A0K7C3 Uncharacterized protein4.5e-2995.45Show/hide
Query:  MGWFKSFLISPFKKLWDRLHSSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNSPLPS
        MGWFKSFLISPFKKLWDRLH SPH+SNRKGIYILYKDVKSCPCEDVQMLWSILVQS SPPNSPLPS
Subjt:  MGWFKSFLISPFKKLWDRLHSSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNSPLPS

A0A2P5C2G4 Uncharacterized protein6.7e-1775.86Show/hide
Query:  MGWFKSFLISPFKKLWDRLHSSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGS
        MGW +SF +SP KKLWDRLHS  H   R+GIYILYKDVKSCPCEDVQ+LWSILV+SG+
Subjt:  MGWFKSFLISPFKKLWDRLHSSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGS

A0A2P5FAV2 Elongation factor8.8e-1775.86Show/hide
Query:  MGWFKSFLISPFKKLWDRLHSSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGS
        MGW +S L+SP KKLWDRLHS  H   R+GIYILYKDVKSCPCEDVQ+LWSILV+SG+
Subjt:  MGWFKSFLISPFKKLWDRLHSSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGS

A0A498KIY5 Uncharacterized protein1.1e-1674.63Show/hide
Query:  MGWFKSFLISPFKKLWDRLHSSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNSP-LPS
        MGW +S L+SP KKLWDRLHSS HR  RKGIYILYKDV+SCPCEDV +LWSILV S S P  P LPS
Subjt:  MGWFKSFLISPFKKLWDRLHSSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNSP-LPS

K7MYL2 Uncharacterized protein6.7e-1772.73Show/hide
Query:  MGWFKSFLISPFKKLWDRLHSSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNSPLPS
        MGWF+S L+ P KKLWDRLHSS     R+GIYILYKDVKSCPCEDV +LWSILV+SG+ P S LPS
Subjt:  MGWFKSFLISPFKKLWDRLHSSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNSPLPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATGGTTCAAATCCTTCCTCATTTCACCATTCAAGAAGCTTTGGGATCGTCTTCACAGCTCCCCCCATAGATCAAACCGAAAAGGAATCTACATTTTGTATAAAGA
TGTGAAGTCTTGCCCTTGTGAAGATGTTCAAATGCTTTGGTCCATTCTCGTTCAGTCTGGCTCTCCTCCTAATTCACCATTACCGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGATGGTTCAAATCCTTCCTCATTTCACCATTCAAGAAGCTTTGGGATCGTCTTCACAGCTCCCCCCATAGATCAAACCGAAAAGGAATCTACATTTTGTATAAAGA
TGTGAAGTCTTGCCCTTGTGAAGATGTTCAAATGCTTTGGTCCATTCTCGTTCAGTCTGGCTCTCCTCCTAATTCACCATTACCGTCATGA
Protein sequenceShow/hide protein sequence
MGWFKSFLISPFKKLWDRLHSSPHRSNRKGIYILYKDVKSCPCEDVQMLWSILVQSGSPPNSPLPS