| GenBank top hits | e value | %identity | Alignment |
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| AFK41754.1 unknown [Lotus japonicus] | 9.70e-55 | 98.85 | Show/hide |
Query: MATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
MA+NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
Subjt: MATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
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| KAG7036265.1 Sm-like protein LSM5, partial [Cucurbita argyrosperma subsp. argyrosperma] | 2.19e-55 | 89.11 | Show/hide |
Query: FFFHSLSFPVKSKFMATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDP
F SL+F + MA NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDP
Subjt: FFFHSLSFPVKSKFMATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDP
Query: E
E
Subjt: E
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| XP_004152020.2 sm-like protein LSM5 [Cucumis sativus] | 1.98e-76 | 84.14 | Show/hide |
Query: MHAAQPKMVSFRWMS-----RRRGIISHALLCSLLPSQIQLAGPFFFHSLSFPVKSKFMATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVY
+HA++P F W+S +GI SHA LC+ LPSQI+LAGPFF HSLSFPVKSKFMATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVY
Subjt: MHAAQPKMVSFRWMS-----RRRGIISHALLCSLLPSQIQLAGPFFFHSLSFPVKSKFMATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVY
Query: VNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
VNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
Subjt: VNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
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| XP_004504703.1 sm-like protein LSM5 [Cicer arietinum] | 1.38e-54 | 98.85 | Show/hide |
Query: MATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
MA NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
Subjt: MATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
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| XP_008454507.1 PREDICTED: sm-like protein LSM5 [Cucumis melo] | 3.13e-96 | 100 | Show/hide |
Query: MHAAQPKMVSFRWMSRRRGIISHALLCSLLPSQIQLAGPFFFHSLSFPVKSKFMATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVL
MHAAQPKMVSFRWMSRRRGIISHALLCSLLPSQIQLAGPFFFHSLSFPVKSKFMATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVL
Subjt: MHAAQPKMVSFRWMSRRRGIISHALLCSLLPSQIQLAGPFFFHSLSFPVKSKFMATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVL
Query: EDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
EDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
Subjt: EDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0L923 U6 snRNA-associated Sm-like protein LSm5 | 9.8e-42 | 100 | Show/hide |
Query: MATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
MATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
Subjt: MATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
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| A0A0B0NQ45 U6 snRNA-associated Sm-like protein LSm5 | 3.7e-41 | 98.85 | Show/hide |
Query: MATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
MA NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
Subjt: MATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
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| A0A1S3BZJ2 U6 snRNA-associated Sm-like protein LSm5 | 1.7e-73 | 100 | Show/hide |
Query: MHAAQPKMVSFRWMSRRRGIISHALLCSLLPSQIQLAGPFFFHSLSFPVKSKFMATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVL
MHAAQPKMVSFRWMSRRRGIISHALLCSLLPSQIQLAGPFFFHSLSFPVKSKFMATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVL
Subjt: MHAAQPKMVSFRWMSRRRGIISHALLCSLLPSQIQLAGPFFFHSLSFPVKSKFMATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVL
Query: EDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
EDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
Subjt: EDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
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| A0A5B7A1J2 U6 snRNA-associated Sm-like protein LSm5 (Fragment) | 5.7e-42 | 91.67 | Show/hide |
Query: LSFPVKSKFMATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
L F ++++ MA NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
Subjt: LSFPVKSKFMATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
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| I3SNB2 U6 snRNA-associated Sm-like protein LSm5 | 2.9e-41 | 98.85 | Show/hide |
Query: MATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
MA+NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
Subjt: MATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPDPE
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| SwissProt top hits | e value | %identity | Alignment |
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| P62322 U6 snRNA-associated Sm-like protein LSm5 | 1.2e-31 | 80 | Show/hide |
Query: TNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
TNPSQLLP EL+D+CIGS+I ++MK DKE+VGTL GFD +VNMVLEDVTE+EIT EGRRITKLDQILLNGNNI +LVPGG
Subjt: TNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
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| Q2HJH0 U6 snRNA-associated Sm-like protein LSm5 | 1.2e-31 | 80 | Show/hide |
Query: TNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
TNPSQLLP EL+D+CIGS+I ++MK DKE+VGTL GFD +VNMVLEDVTE+EIT EGRRITKLDQILLNGNNI +LVPGG
Subjt: TNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
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| Q5R628 U6 snRNA-associated Sm-like protein LSm5 | 1.2e-31 | 80 | Show/hide |
Query: TNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
TNPSQLLP EL+D+CIGS+I ++MK DKE+VGTL GFD +VNMVLEDVTE+EIT EGRRITKLDQILLNGNNI +LVPGG
Subjt: TNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
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| Q9FKB0 Sm-like protein LSM5 | 1.4e-40 | 94.12 | Show/hide |
Query: MATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPD
MA NPSQLLPSELIDRCIGSKIWVIMKGDKELVG L+GFDVYVNMVLEDVTEYEITAEGRR+TKLDQILLNGNNIAILVPGGSP+
Subjt: MATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPD
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| Q9Y4Y9 U6 snRNA-associated Sm-like protein LSm5 | 1.2e-31 | 80 | Show/hide |
Query: TNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
TNPSQLLP EL+D+CIGS+I ++MK DKE+VGTL GFD +VNMVLEDVTE+EIT EGRRITKLDQILLNGNNI +LVPGG
Subjt: TNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G18740.1 Small nuclear ribonucleoprotein family protein | 2.9e-06 | 36.36 | Show/hide |
Query: PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
P LI R + SK IW+ + D + G + GFD Y+N+VL++ E I R+ L +ILL G+NI +++ G
Subjt: PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
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| AT3G14080.1 Small nuclear ribonucleoprotein family protein | 1.6e-04 | 28.38 | Show/hide |
Query: PSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIL
P ++ S + + K+ V+++ ++L+GTLR FD + N VLE E I E L ++ G N+ ++
Subjt: PSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIL
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| AT3G14080.2 Small nuclear ribonucleoprotein family protein | 1.6e-04 | 28.38 | Show/hide |
Query: PSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIL
P ++ S + + K+ V+++ ++L+GTLR FD + N VLE E I E L ++ G N+ ++
Subjt: PSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIL
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| AT4G30330.1 Small nuclear ribonucleoprotein family protein | 1.3e-06 | 36.36 | Show/hide |
Query: PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
P LI R + SK IW+ + D + G + GFD Y+N+VL++ E I + R+ L +ILL G+NI +++ G
Subjt: PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGG
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| AT5G48870.1 Small nuclear ribonucleoprotein family protein | 9.7e-42 | 94.12 | Show/hide |
Query: MATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPD
MA NPSQLLPSELIDRCIGSKIWVIMKGDKELVG L+GFDVYVNMVLEDVTEYEITAEGRR+TKLDQILLNGNNIAILVPGGSP+
Subjt: MATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAILVPGGSPD
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