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IVF0025952 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025952
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr08:27831252..27842782
RNA-Seq ExpressionIVF0025952
SyntenyIVF0025952
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051580.1 retrotransposon protein [Cucumis melo var. makuwa]3.57e-16100Show/hide
Query:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
        MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
Subjt:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
KAA0051960.1 retrotransposon protein [Cucumis melo var. makuwa]2.35e-1590.7Show/hide
Query:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIFVLPL
        MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI   P+
Subjt:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIFVLPL
KAA0054147.1 retrotransposon protein [Cucumis melo var. makuwa]2.21e-15100Show/hide
Query:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
        MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
Subjt:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
KAA0054687.1 retrotransposon protein [Cucumis melo var. makuwa]4.26e-16100Show/hide
Query:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
        MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
Subjt:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
KAA0063125.1 retrotransposon protein [Cucumis melo var. makuwa]3.57e-16100Show/hide
Query:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
        MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
Subjt:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
TrEMBL top hitse value%identityAlignment
A0A5A7U9V6 Retrotransposon protein1.4e-1190.7Show/hide
Query:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIFVLPL
        MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI   P+
Subjt:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIFVLPL
A0A5A7UME4 Retrotransposon protein5.2e-11100Show/hide
Query:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
        MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
Subjt:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
A0A5D3CBF7 Retrotransposon protein5.2e-11100Show/hide
Query:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
        MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
Subjt:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
A0A5D3DPR5 Retrotransposon protein5.2e-11100Show/hide
Query:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
        MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
Subjt:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
A0A5D3E474 Retrotransposon protein5.2e-11100Show/hide
Query:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
        MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
Subjt:  MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCCTGATGATTTGATGGAAACAAGAACCGCTAGGGTCAGTGAACGTAGAAATGTTTCAAGCGGGTCTAAGCGGAAACGTCCAGGACATGCCACAGATAGTGGGGA
CATATTCGTACTGCCATTGAGTACGGAAATGAACAACTTCATCGCATTGCTGAATGGCCTATCCTACAACGTCAAGATGCTACCCAAACACGTCAAGAGATTGTTCGACA
GTTGGAGGCCATCCCTGAGTTCACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCCTGATGATTTGATGGAAACAAGAACCGCTAGGGTCAGTGAACGTAGAAATGTTTCAAGCGGGTCTAAGCGGAAACGTCCAGGACATGCCACAGATAGTGGGGA
CATATTCGTACTGCCATTGAGTACGGAAATGAACAACTTCATCGCATTGCTGAATGGCCTATCCTACAACGTCAAGATGCTACCCAAACACGTCAAGAGATTGTTCGACA
GTTGGAGGCCATCCCTGAGTTCACATTGA
Protein sequenceShow/hide protein sequence
MSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIFVLPLSTEMNNFIALLNGLSYNVKMLPKHVKRLFDSWRPSLSSH