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IVF0025995 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0025995
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposable element Tf2
Genome locationchr10:13246358..13246636
RNA-Seq ExpressionIVF0025995
SyntenyIVF0025995
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051819.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.56e-2468.35Show/hide
Query:  EDQFLIAKNSIMSSIT----------VMETVIHTIFDDNKQDDLKDTRISSDSSVNDIDFHNDPYYNFDIFYPYLDSQP
        EDQFL+AKNSIM+SI           +M+TV+H IFDDNK+DD +DTRISSDSSVN+ID  ND YYNFDIF PYLDSQP
Subjt:  EDQFLIAKNSIMSSIT----------VMETVIHTIFDDNKQDDLKDTRISSDSSVNDIDFHNDPYYNFDIFYPYLDSQP

KAA0052120.1 hypothetical protein E6C27_scaffold578G001120 [Cucumis melo var. makuwa]1.25e-2060.44Show/hide
Query:  MVRNQHSSLSISREDQFLIAKNSIMSSIT----------VMETVIHTIFDDNKQDDLKDTRISSDSSVNDIDFHNDPYYNFDIFYPYLDSQ
        MV NQ SSLS   EDQFL+AKNSIM+SI           VME VI+  F DNKQD+ +D    SDSS+NDIDF NDPYYNFDI   YLD Q
Subjt:  MVRNQHSSLSISREDQFLIAKNSIMSSIT----------VMETVIHTIFDDNKQDDLKDTRISSDSSVNDIDFHNDPYYNFDIFYPYLDSQ

KAA0066324.1 hypothetical protein E6C27_scaffold21G003850 [Cucumis melo var. makuwa]1.18e-2564.13Show/hide
Query:  MVRNQHSSLSISREDQFLIAKNSIMSSIT----------VMETVIHTIFDDNKQDDLKDTRISSDSSVNDIDFHNDPYYNFDIFYPYLDSQP
        MV NQ SSLS   E+Q+L AKNSIM+ I           VMETVIHTIF+DNK+D+ ++TRIS DSS+NDI+F NDPYYNFDIF  YLDSQP
Subjt:  MVRNQHSSLSISREDQFLIAKNSIMSSIT----------VMETVIHTIFDDNKQDDLKDTRISSDSSVNDIDFHNDPYYNFDIFYPYLDSQP

KGN53659.1 hypothetical protein Csa_014527 [Cucumis sativus]9.04e-2363.41Show/hide
Query:  LSISREDQFLIAKNSIMSSI----------TVMETVIHTIFDDNKQDDLKDTRISSDSSVNDIDFHNDPYYNFDIFYPYLDS
        LS   EDQFL+ KNSIM+ I          TVMETVIHTI+DD+K++D++DTRISS+S  NDIDF NDPYYNFDI  PY DS
Subjt:  LSISREDQFLIAKNSIMSSI----------TVMETVIHTIFDDNKQDDLKDTRISSDSSVNDIDFHNDPYYNFDIFYPYLDS

TYK04653.1 cysteine-rich RLK RECEPTOR-like protein kinase [Cucumis melo var. makuwa]1.18e-1864.94Show/hide
Query:  EDQFLIAKNSIMSSIT----------VMETVIHTIFDDNKQDDLKDTRISSDSSVNDIDFHNDPYYNFDIFYPYLDS
        EDQFL+AKNSIM+SI           VMETV++   DDNKQD  +D    SDSSVNDIDF NDPYYNFDIF PYLDS
Subjt:  EDQFLIAKNSIMSSIT----------VMETVIHTIFDDNKQDDLKDTRISSDSSVNDIDFHNDPYYNFDIFYPYLDS

TrEMBL top hitse value%identityAlignment
A0A0A0KXT5 Uncharacterized protein2.4e-1661.18Show/hide
Query:  HSSLSISREDQFLIAKNSIMSSI----------TVMETVIHTIFDDNKQDDLKDTRISSDSSVNDIDFHNDPYYNFDIFYPYLDS
        ++ LS   EDQFL+ KNSIM+ I          TVMETVIHTI+DD+K++D++DTRISS+S  NDIDF NDPYYNFDI  PY DS
Subjt:  HSSLSISREDQFLIAKNSIMSSI----------TVMETVIHTIFDDNKQDDLKDTRISSDSSVNDIDFHNDPYYNFDIFYPYLDS

A0A5A7UEA0 Retrotransposable element Tf22.6e-1868.35Show/hide
Query:  EDQFLIAKNSIMSSI----------TVMETVIHTIFDDNKQDDLKDTRISSDSSVNDIDFHNDPYYNFDIFYPYLDSQP
        EDQFL+AKNSIM+SI           +M+TV+H IFDDNK+DD +DTRISSDSSVN+ID  ND YYNFDIF PYLDSQP
Subjt:  EDQFLIAKNSIMSSI----------TVMETVIHTIFDDNKQDDLKDTRISSDSSVNDIDFHNDPYYNFDIFYPYLDSQP

A0A5D3BG31 Uncharacterized protein3.0e-1460.44Show/hide
Query:  MVRNQHSSLSISREDQFLIAKNSIMSSI----------TVMETVIHTIFDDNKQDDLKDTRISSDSSVNDIDFHNDPYYNFDIFYPYLDSQ
        MV NQ SSLS   EDQFL+AKNSIM+SI           VME VI+  F DNKQD+ +D    SDSS+NDIDF NDPYYNFDI   YLD Q
Subjt:  MVRNQHSSLSISREDQFLIAKNSIMSSI----------TVMETVIHTIFDDNKQDDLKDTRISSDSSVNDIDFHNDPYYNFDIFYPYLDSQ

A0A5D3BP68 Uncharacterized protein4.4e-1864.13Show/hide
Query:  MVRNQHSSLSISREDQFLIAKNSIMSSI----------TVMETVIHTIFDDNKQDDLKDTRISSDSSVNDIDFHNDPYYNFDIFYPYLDSQP
        MV NQ SSLS   E+Q+L AKNSIM+ I           VMETVIHTIF+DNK+D+ ++TRIS DSS+NDI+F NDPYYNFDIF  YLDSQP
Subjt:  MVRNQHSSLSISREDQFLIAKNSIMSSI----------TVMETVIHTIFDDNKQDDLKDTRISSDSSVNDIDFHNDPYYNFDIFYPYLDSQP

A0A5D3BY11 Cysteine-rich RLK RECEPTOR-like protein kinase8.6e-1464.94Show/hide
Query:  EDQFLIAKNSIMSSI----------TVMETVIHTIFDDNKQDDLKDTRISSDSSVNDIDFHNDPYYNFDIFYPYLDS
        EDQFL+AKNSIM+SI           VMETV++   DDNKQD  +D    SDSSVNDIDF NDPYYNFDIF PYLDS
Subjt:  EDQFLIAKNSIMSSI----------TVMETVIHTIFDDNKQDDLKDTRISSDSSVNDIDFHNDPYYNFDIFYPYLDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCGAAACCAACACTCATCTCTCTCTATCTCTCGAGAAGACCAATTCCTTATCGCAAAGAATTCAATTATGAGCTCCATAACAGTCATGGAAACAGTCATCCACAC
CATTTTTGATGACAACAAACAAGATGACCTTAAAGATACCAGAATTTCTTCAGATTCATCCGTCAACGATATTGATTTTCATAATGATCCATATTACAACTTCGATATTT
TTTATCCCTATTTGGATTCCCAACCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCGAAACCAACACTCATCTCTCTCTATCTCTCGAGAAGACCAATTCCTTATCGCAAAGAATTCAATTATGAGCTCCATAACAGTCATGGAAACAGTCATCCACAC
CATTTTTGATGACAACAAACAAGATGACCTTAAAGATACCAGAATTTCTTCAGATTCATCCGTCAACGATATTGATTTTCATAATGATCCATATTACAACTTCGATATTT
TTTATCCCTATTTGGATTCCCAACCATGA
Protein sequenceShow/hide protein sequence
MVRNQHSSLSISREDQFLIAKNSIMSSITVMETVIHTIFDDNKQDDLKDTRISSDSSVNDIDFHNDPYYNFDIFYPYLDSQP