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IVF0026032 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026032
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr04:23817937..23818326
RNA-Seq ExpressionIVF0026032
SyntenyIVF0026032
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053169.1 uncharacterized protein E6C27_scaffold1121G00060 [Cucumis melo var. makuwa]2.69e-1051.14Show/hide
Query:  AEALEYKARPWARAACINERVCGARCMPMHLRGACPLGAAHAMRLGACVGRASQAHATAVGRARRVPRTPCLC--ERGDPSKGRAFLA
        AEALEYKARPWA A C++ R   AR MP+ LRGA             C  RA QAHATAVG ARRVPR   +   ERG   +  A L+
Subjt:  AEALEYKARPWARAACINERVCGARCMPMHLRGACPLGAAHAMRLGACVGRASQAHATAVGRARRVPRTPCLC--ERGDPSKGRAFLA
TrEMBL top hitse value%identityAlignment
A0A5A7UI67 Retrotrans_gag domain-containing protein1.3e-0851.14Show/hide
Query:  AEALEYKARPWARAACINERVCGARCMPMHLRGACPLGAAHAMRLGACVGRASQAHATAVGRARRVPRTPCLC--ERGDPSKGRAFLA
        AEALEYKARPWA A C++ R   AR MP+ LR             GAC  RA QAHATAVG ARRVPR   +   ERG   +  A L+
Subjt:  AEALEYKARPWARAACINERVCGARCMPMHLRGACPLGAAHAMRLGACVGRASQAHATAVGRARRVPRTPCLC--ERGDPSKGRAFLA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAGGCCTTGGAGTACAAAGCACGGCCATGGGCGCGTGCGGCGTGCATCAATGAGCGTGTGTGTGGAGCTCGTTGTATGCCCATGCATCTGCGGGGGGCGTGCCC
CCTGGGTGCCGCGCACGCCATGCGTCTGGGGGCGTGTGTGGGGCGTGCATCGCAAGCCCATGCGACTGCAGTGGGGCGTGCGCGTAGGGTGCCGCGCACGCCATGCTTGT
GCGAGCGTGGGGATCCGTCTAAGGGGCGTGCATTCTTGGCTTGTAAGTTGCAGATGAGCCTTATTGCCATGATCCACCGAGATTCAGCTCGACCTTACCCACACACAACT
TATATATTTATTCCAATTGCCATGGAGGTTATAGCTTATGTAAAAGGACGAAAAACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAGGCCTTGGAGTACAAAGCACGGCCATGGGCGCGTGCGGCGTGCATCAATGAGCGTGTGTGTGGAGCTCGTTGTATGCCCATGCATCTGCGGGGGGCGTGCCC
CCTGGGTGCCGCGCACGCCATGCGTCTGGGGGCGTGTGTGGGGCGTGCATCGCAAGCCCATGCGACTGCAGTGGGGCGTGCGCGTAGGGTGCCGCGCACGCCATGCTTGT
GCGAGCGTGGGGATCCGTCTAAGGGGCGTGCATTCTTGGCTTGTAAGTTGCAGATGAGCCTTATTGCCATGATCCACCGAGATTCAGCTCGACCTTACCCACACACAACT
TATATATTTATTCCAATTGCCATGGAGGTTATAGCTTATGTAAAAGGACGAAAAACATAA
Protein sequenceShow/hide protein sequence
MAEALEYKARPWARAACINERVCGARCMPMHLRGACPLGAAHAMRLGACVGRASQAHATAVGRARRVPRTPCLCERGDPSKGRAFLACKLQMSLIAMIHRDSARPYPHTT
YIFIPIAMEVIAYVKGRKT