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IVF0026053 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026053
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr08:29948477..29948689
RNA-Seq ExpressionIVF0026053
SyntenyIVF0026053
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040128.1 gag-pol polyprotein [Cucumis melo var. makuwa]3.20e-3390Show/hide
Query:  MTEDETIAEFNVRVLDIANESDALGEKMYDSKLVQKVLRSLPSRFNMKITAIEEANDLSKMKLDELFGSL
        MTEDETI EFNVRVLDI N+SDALG+KM DSKLVQKVLRSLPSRFNMK+TAIEEANDL KMKLDELFGSL
Subjt:  MTEDETIAEFNVRVLDIANESDALGEKMYDSKLVQKVLRSLPSRFNMKITAIEEANDLSKMKLDELFGSL

KAA0043137.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]8.87e-3592.86Show/hide
Query:  MTEDETIAEFNVRVLDIANESDALGEKMYDSKLVQKVLRSLPSRFNMKITAIEEANDLSKMKLDELFGSL
        MTEDETIAEFNVRVLDIANESDA GEKM DSKLV+KVLRSLPS+FNMK+TAIEEANDLSKMKLDELFGSL
Subjt:  MTEDETIAEFNVRVLDIANESDALGEKMYDSKLVQKVLRSLPSRFNMKITAIEEANDLSKMKLDELFGSL

KAA0045046.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]2.87e-37100Show/hide
Query:  EDETIAEFNVRVLDIANESDALGEKMYDSKLVQKVLRSLPSRFNMKITAIEEANDLSKMKLDELFGSL
        EDETIAEFNVRVLDIANESDALGEKMYDSKLVQKVLRSLPSRFNMKITAIEEANDLSKMKLDELFGSL
Subjt:  EDETIAEFNVRVLDIANESDALGEKMYDSKLVQKVLRSLPSRFNMKITAIEEANDLSKMKLDELFGSL

KAA0060050.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.29e-3289.71Show/hide
Query:  EDETIAEFNVRVLDIANESDALGEKMYDSKLVQKVLRSLPSRFNMKITAIEEANDLSKMKLDELFGSL
        EDE IAEFN RVLDIANE DALGEKM DSKLV+KVLRSLPS+FNMK+TAIEEANDLSKMKLDELFGSL
Subjt:  EDETIAEFNVRVLDIANESDALGEKMYDSKLVQKVLRSLPSRFNMKITAIEEANDLSKMKLDELFGSL

TYK21749.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.91e-3288.57Show/hide
Query:  MTEDETIAEFNVRVLDIANESDALGEKMYDSKLVQKVLRSLPSRFNMKITAIEEANDLSKMKLDELFGSL
        MTEDETIAEFNVRVLDI N+SDALG+KM DSKLVQKVLRS+P RFNMK+TAIEEANDL KMKLDELFGSL
Subjt:  MTEDETIAEFNVRVLDIANESDALGEKMYDSKLVQKVLRSLPSRFNMKITAIEEANDLSKMKLDELFGSL

TrEMBL top hitse value%identityAlignment
A0A5A7TAY2 Gag-pol polyprotein5.4e-2590Show/hide
Query:  MTEDETIAEFNVRVLDIANESDALGEKMYDSKLVQKVLRSLPSRFNMKITAIEEANDLSKMKLDELFGSL
        MTEDETI EFNVRVLDI N+SDALG+KM DSKLVQKVLRSLPSRFNMK+TAIEEANDL KMKLDELFGSL
Subjt:  MTEDETIAEFNVRVLDIANESDALGEKMYDSKLVQKVLRSLPSRFNMKITAIEEANDLSKMKLDELFGSL

A0A5A7TMW2 Gag-proteinase polyprotein2.9e-2692.86Show/hide
Query:  MTEDETIAEFNVRVLDIANESDALGEKMYDSKLVQKVLRSLPSRFNMKITAIEEANDLSKMKLDELFGSL
        MTEDETIAEFNVRVLDIANESDA GEKM DSKLV+KVLRSLPS+FNMK+TAIEEANDLSKMKLDELFGSL
Subjt:  MTEDETIAEFNVRVLDIANESDALGEKMYDSKLVQKVLRSLPSRFNMKITAIEEANDLSKMKLDELFGSL

A0A5A7TSC7 Gag-proteinase polyprotein1.5e-27100Show/hide
Query:  EDETIAEFNVRVLDIANESDALGEKMYDSKLVQKVLRSLPSRFNMKITAIEEANDLSKMKLDELFGSL
        EDETIAEFNVRVLDIANESDALGEKMYDSKLVQKVLRSLPSRFNMKITAIEEANDLSKMKLDELFGSL
Subjt:  EDETIAEFNVRVLDIANESDALGEKMYDSKLVQKVLRSLPSRFNMKITAIEEANDLSKMKLDELFGSL

A0A5A7V046 Gag-pol polyprotein4.2e-2591.43Show/hide
Query:  MTEDETIAEFNVRVLDIANESDALGEKMYDSKLVQKVLRSLPSRFNMKITAIEEANDLSKMKLDELFGSL
        M E ETIAEFNVRVLDIANESDALGEKM DSKLV+KVLRSLPS+FNMK+TAIEEANDLSKMKLDELFGSL
Subjt:  MTEDETIAEFNVRVLDIANESDALGEKMYDSKLVQKVLRSLPSRFNMKITAIEEANDLSKMKLDELFGSL

A0A5D3DEI5 Gag-pol polyprotein2.1e-2488.57Show/hide
Query:  MTEDETIAEFNVRVLDIANESDALGEKMYDSKLVQKVLRSLPSRFNMKITAIEEANDLSKMKLDELFGSL
        MTEDETIAEFNVRVLDI N+SDALG+KM DSKLVQKVLRS+P RFNMK+TAIEEANDL KMKLDELFGSL
Subjt:  MTEDETIAEFNVRVLDIANESDALGEKMYDSKLVQKVLRSLPSRFNMKITAIEEANDLSKMKLDELFGSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGAAGATGAGACAATTGCTGAGTTCAATGTCCGAGTACTTGACATTGCCAACGAGTCAGATGCGTTAGGAGAAAAGATGTATGACTCAAAACTTGTCCAGAAAGT
CTTAAGATCTCTGCCATCCAGGTTCAATATGAAGATCACTGCAATTGAAGAAGCTAATGACCTGTCAAAGATGAAGCTGGATGAGTTGTTTGGGTCGTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGACAGAAGATGAGACAATTGCTGAGTTCAATGTCCGAGTACTTGACATTGCCAACGAGTCAGATGCGTTAGGAGAAAAGATGTATGACTCAAAACTTGTCCAGAAAGT
CTTAAGATCTCTGCCATCCAGGTTCAATATGAAGATCACTGCAATTGAAGAAGCTAATGACCTGTCAAAGATGAAGCTGGATGAGTTGTTTGGGTCGTTATGA
Protein sequenceShow/hide protein sequence
MTEDETIAEFNVRVLDIANESDALGEKMYDSKLVQKVLRSLPSRFNMKITAIEEANDLSKMKLDELFGSL