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IVF0026066 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0026066
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description54S ribosomal protein L37
Genome locationchr10:11991582..11992924
RNA-Seq ExpressionIVF0026066
SyntenyIVF0026066
Gene Ontology termsGO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR013870 - Ribosomal protein L37, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144674.3 39S ribosomal protein L54, mitochondrial [Cucumis sativus]6.53e-5172.93Show/hide
Query:  LNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHIA
        ++QI LFRR+IIV+SKNLIQLTSVRTFAAGGKSKKGSKGGAAA+APKASILSKEV STTV+GA ILKE AD K+MADS+Y   WLW+LL+KHPPLS+   
Subjt:  LNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHIA

Query:  EEECRNPFLTDLKRFGKLDSRERIKENSFIKAK
        +     P+  DLKRF KLD+R RIKEN+ IKAK
Subjt:  EEECRNPFLTDLKRFGKLDSRERIKENSFIKAK

XP_008442187.1 PREDICTED: 54S ribosomal protein L37, mitochondrial isoform X2 [Cucumis melo]1.48e-5272.59Show/hide
Query:  MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKH
        MGL+QI  FRR+IIV+SK+LIQLTSVR+FAAGGKSKKGSKGGAAA+APKASILSKEV STTV+GA ILKE AD K+MADS+Y   WLWHLLDKHPPLS+ 
Subjt:  MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKH

Query:  IAEEECRNPFLTDLKRFGKLDSRERIKENSFIKAK
          +     P+  DL+RF KLD+R RIKEN+ IKAK
Subjt:  IAEEECRNPFLTDLKRFGKLDSRERIKENSFIKAK

XP_016899597.1 PREDICTED: 39S ribosomal protein L54, mitochondrial isoform X1 [Cucumis melo]7.40e-5471.94Show/hide
Query:  QKKNMGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPP
        +KK MGL+QI  FRR+IIV+SK+LIQLTSVR+FAAGGKSKKGSKGGAAA+APKASILSKEV STTV+GA ILKE AD K+MADS+Y   WLWHLLDKHPP
Subjt:  QKKNMGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPP

Query:  LSKHIAEEECRNPFLTDLKRFGKLDSRERIKENSFIKAK
        LS+   +     P+  DL+RF KLD+R RIKEN+ IKAK
Subjt:  LSKHIAEEECRNPFLTDLKRFGKLDSRERIKENSFIKAK

XP_016902030.1 PREDICTED: uncharacterized protein LOC103496726 [Cucumis melo]1.74e-86100Show/hide
Query:  MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKH
        MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKH
Subjt:  MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKH

Query:  IAEEECRNPFLTDLKRFGKLDSRERIKENSFIKAKS
        IAEEECRNPFLTDLKRFGKLDSRERIKENSFIKAKS
Subjt:  IAEEECRNPFLTDLKRFGKLDSRERIKENSFIKAKS

XP_038883606.1 39S ribosomal protein L54, mitochondrial isoform X1 [Benincasa hispida]8.96e-5171.74Show/hide
Query:  KNMGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLS
        K M ++QI LFRRSI VNSK+LIQLTSVRTFAAGGKSKKGSKGGAAA+APKAS LSKEV STTV+GA ILKE AD K+MADS+Y  VWLWHLLDKHPPLS
Subjt:  KNMGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLS

Query:  KHIAEEECRNPFLTDLKRFGKLDSRERIKENSFIKAKS
        +   +     P++ DLKRF KLD+R +IKEN+  KAK+
Subjt:  KHIAEEECRNPFLTDLKRFGKLDSRERIKENSFIKAKS

TrEMBL top hitse value%identityAlignment
A0A1S3B544 54S ribosomal protein L37, mitochondrial isoform X22.6e-4071.85Show/hide
Query:  MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKH
        MGL+QI  FRR+IIV+SK+LIQLTSVR+FAAGGKSKKGSKGGAAA+APKASILSKEV STTV+GA ILKE AD K+MADS+ Y  WLWHLLDKHPPLS+ 
Subjt:  MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKH

Query:  IAEEECRNPFLTDLKRFGKLDSRERIKENSFIKAK
        +  +   +    DL+RF KLD+R RIKEN+ IKAK
Subjt:  IAEEECRNPFLTDLKRFGKLDSRERIKENSFIKAK

A0A1S4DUD4 39S ribosomal protein L54, mitochondrial isoform X11.8e-4171.22Show/hide
Query:  QKKNMGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPP
        +KK MGL+QI  FRR+IIV+SK+LIQLTSVR+FAAGGKSKKGSKGGAAA+APKASILSKEV STTV+GA ILKE AD K+MADS+ Y  WLWHLLDKHPP
Subjt:  QKKNMGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPP

Query:  LSKHIAEEECRNPFLTDLKRFGKLDSRERIKENSFIKAK
        LS+ +  +   +    DL+RF KLD+R RIKEN+ IKAK
Subjt:  LSKHIAEEECRNPFLTDLKRFGKLDSRERIKENSFIKAK

A0A1S4E228 uncharacterized protein LOC1034967264.7e-66100Show/hide
Query:  MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKH
        MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKH
Subjt:  MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKH

Query:  IAEEECRNPFLTDLKRFGKLDSRERIKENSFIKAKS
        IAEEECRNPFLTDLKRFGKLDSRERIKENSFIKAKS
Subjt:  IAEEECRNPFLTDLKRFGKLDSRERIKENSFIKAKS

A0A5D3CXE8 39S ribosomal protein L541.8e-4171.22Show/hide
Query:  QKKNMGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPP
        +KK MGL+QI  FRR+IIV+SK+LIQLTSVR+FAAGGKSKKGSKGGAAA+APKASILSKEV STTV+GA ILKE AD K+MADS+ Y  WLWHLLDKHPP
Subjt:  QKKNMGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPP

Query:  LSKHIAEEECRNPFLTDLKRFGKLDSRERIKENSFIKAK
        LS+ +  +   +    DL+RF KLD+R RIKEN+ IKAK
Subjt:  LSKHIAEEECRNPFLTDLKRFGKLDSRERIKENSFIKAK

A0A5D3DQ60 54S ribosomal protein L374.7e-66100Show/hide
Query:  MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKH
        MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKH
Subjt:  MGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKH

Query:  IAEEECRNPFLTDLKRFGKLDSRERIKENSFIKAKS
        IAEEECRNPFLTDLKRFGKLDSRERIKENSFIKAKS
Subjt:  IAEEECRNPFLTDLKRFGKLDSRERIKENSFIKAKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01740.1 Mitochondrial ribosomal protein L375.8e-2451.11Show/hide
Query:  LNQISLFRRSIIVNSKNLIQLTSVRTF-AAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHI
        +N+I L R S   +SK++++    RTF AA  K+KKG KGG A++APK S L+KE+ STTV+GA  LK+ +D K++ DS Y   WLWHLLDK P LS+  
Subjt:  LNQISLFRRSIIVNSKNLIQLTSVRTF-AAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHI

Query:  AEEECRNPFLTDLKRFGKLDSRERIKENSFIKAKS
         +     P+  DLKRF KLD+R +IKEN+ IKAK+
Subjt:  AEEECRNPFLTDLKRFGKLDSRERIKENSFIKAKS

AT5G14290.1 Mitochondrial ribosomal protein L373.3e-1945.93Show/hide
Query:  LNQISLFRRSIIVNSKNLIQLTSVRTFA-AGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHI
        +N I +F  S I  SK++++    RTFA A GK+KK  +G    +APKAS LSKE+ S+ V+ A  LK+  D K++ +S +   +LWHLLDK P LS+ +
Subjt:  LNQISLFRRSIIVNSKNLIQLTSVRTFA-AGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHPPLSKHI

Query:  AEEECRNPFLTDLKRFGKLDSRERIKENSFIKAKS
          +        DLKRF KLD+R RIKEN  IKAK+
Subjt:  AEEECRNPFLTDLKRFGKLDSRERIKENSFIKAKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCTGCTCCTATTTATCTATATGAAAAACAGAAGAAAAATATGGGTTTGAACCAAATTAGTTTGTTTAGAAGAAGCATTATTGTCAATAGCAAAAACCTAATACA
ACTGACATCTGTTCGAACATTTGCTGCCGGAGGCAAATCAAAGAAGGGATCTAAAGGGGGTGCAGCTGCTAATGCTCCTAAAGCGTCGATACTAAGTAAAGAGGTGACGT
CTACTACTGTAATTGGTGCCAAAATTCTCAAAGAAGTTGCAGACTCGAAAGTTATGGCAGACTCAAAGTACTACTCTGTTTGGCTGTGGCATTTGCTTGATAAACATCCA
CCTCTAAGCAAGCACATTGCGGAGGAAGAATGTCGAAACCCTTTCCTAACGGATCTCAAACGCTTTGGTAAATTGGATAGTCGAGAAAGAATCAAGGAAAACAGCTTTAT
TAAGGCCAAGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCCTGCTCCTATTTATCTATATGAAAAACAGAAGAAAAATATGGGTTTGAACCAAATTAGTTTGTTTAGAAGAAGCATTATTGTCAATAGCAAAAACCTAATACA
ACTGACATCTGTTCGAACATTTGCTGCCGGAGGCAAATCAAAGAAGGGATCTAAAGGGGGTGCAGCTGCTAATGCTCCTAAAGCGTCGATACTAAGTAAAGAGGTGACGT
CTACTACTGTAATTGGTGCCAAAATTCTCAAAGAAGTTGCAGACTCGAAAGTTATGGCAGACTCAAAGTACTACTCTGTTTGGCTGTGGCATTTGCTTGATAAACATCCA
CCTCTAAGCAAGCACATTGCGGAGGAAGAATGTCGAAACCCTTTCCTAACGGATCTCAAACGCTTTGGTAAATTGGATAGTCGAGAAAGAATCAAGGAAAACAGCTTTAT
TAAGGCCAAGAGTTGA
Protein sequenceShow/hide protein sequence
MPPAPIYLYEKQKKNMGLNQISLFRRSIIVNSKNLIQLTSVRTFAAGGKSKKGSKGGAAANAPKASILSKEVTSTTVIGAKILKEVADSKVMADSKYYSVWLWHLLDKHP
PLSKHIAEEECRNPFLTDLKRFGKLDSRERIKENSFIKAKS